RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 Q5XG85 94 aa13.54□□□□□ -0.24
VPS16-201ENST00000380443 IGHV6-1A0A0B4J1U7 121 aa13.51□□□□□ -0.25
VPS16-201ENST00000380443 H0Y9P7 68 aa13.51□□□□□ -0.25
VPS16-201ENST00000380443 A0A087X002 238 aa13.5□□□□□ -0.25
VPS16-201ENST00000380443 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
VPS16-201ENST00000380443 KRTAP1-4P0C5Y4 121 aa13.48□□□□□ -0.25
VPS16-201ENST00000380443 OXTP01178 125 aa13.47□□□□□ -0.25
VPS16-201ENST00000380443 LINC00208Q96KT6 92 aa13.46□□□□□ -0.25
VPS16-201ENST00000380443 TRAV22A0A0B4J277 110 aa13.46□□□□□ -0.26
VPS16-201ENST00000380443 MRPL34Q9BQ48 92 aaKnown RBP13.46□□□□□ -0.26
VPS16-201ENST00000380443 DYNC1H1Q14204 4646 aaKnown RBP13.45□□□□□ -0.26
VPS16-201ENST00000380443 LRP1BQ9NZR2 4599 aa13.44□□□□□ -0.26
VPS16-201ENST00000380443 C8orf87E5RJ46 101 aa13.44□□□□□ -0.26
VPS16-201ENST00000380443 SPINK6Q6UWN8 80 aa13.44□□□□□ -0.26
VPS16-201ENST00000380443 LIMD2Q9BT23 127 aa13.42□□□□□ -0.26
VPS16-201ENST00000380443 C1orf64Q8NEQ6 169 aa13.39□□□□□ -0.27
VPS16-201ENST00000380443 PLA2G1BP04054 148 aaKnown RBP13.38□□□□□ -0.27
VPS16-201ENST00000380443 SMIM26A0A096LP01 95 aa13.36□□□□□ -0.27
VPS16-201ENST00000380443 CYP4F30PQ9H0H9 118 aa13.36□□□□□ -0.27
VPS16-201ENST00000380443 SPANXA2-OT1Q8N9U9 137 aa13.36□□□□□ -0.27
VPS16-201ENST00000380443 C4orf48Q5BLP8 95 aa13.34□□□□□ -0.27
VPS16-201ENST00000380443 NDUFS5O43920 106 aa13.34□□□□□ -0.27
VPS16-201ENST00000380443 C1orf195Q5TG92 126 aa13.33□□□□□ -0.28
VPS16-201ENST00000380443 TYMSOSQ8TAI1 123 aa13.33□□□□□ -0.28
VPS16-201ENST00000380443 C4orf26Q17RF5 130 aa13.32□□□□□ -0.28
VPS16-201ENST00000380443 NOTCH2NLQ7Z3S9 236 aa13.32□□□□□ -0.28
VPS16-201ENST00000380443 SPINK1P00995 79 aa13.31□□□□□ -0.28
VPS16-201ENST00000380443 VPS13BQ7Z7G8 4022 aa13.3□□□□□ -0.28
VPS16-201ENST00000380443 KIAA1109Q2LD37 5005 aa13.29□□□□□ -0.28
VPS16-201ENST00000380443 LINC00313P59037 77 aa13.27□□□□□ -0.29
VPS16-201ENST00000380443 RPS29P62273 56 aaKnown RBP13.26□□□□□ -0.29
VPS16-201ENST00000380443 SPAG11AQ6PDA7 123 aa13.25□□□□□ -0.29
VPS16-201ENST00000380443 APOBP04114 4563 aaKnown RBP13.24□□□□□ -0.29
VPS16-201ENST00000380443 RYR1P21817 5038 aa13.22□□□□□ -0.29
VPS16-201ENST00000380443 PRO0628Q9UI54 55 aa13.19□□□□□ -0.3
VPS16-201ENST00000380443 HSPG2P98160 4391 aa13.18□□□□□ -0.3
VPS16-201ENST00000380443 LOC101927531A0A1B0GV80 90 aa13.18□□□□□ -0.3
VPS16-201ENST00000380443 HERC2O95714 4834 aa13.17□□□□□ -0.3
VPS16-201ENST00000380443 IGLV7-46A0A075B6I9 117 aa13.17□□□□□ -0.3
VPS16-201ENST00000380443 SMR3BP02814 79 aaPredicted RBP13.17□□□□□ -0.3
VPS16-201ENST00000380443 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
VPS16-201ENST00000380443 LINC00304Q8N9R0 145 aa13.17□□□□□ -0.3
VPS16-201ENST00000380443 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
VPS16-201ENST00000380443 Q8N1X5 172 aa13.16□□□□□ -0.3
VPS16-201ENST00000380443 PRR26Q8N8Z3 221 aa13.14□□□□□ -0.31
VPS16-201ENST00000380443 KRTAP10-4P60372 401 aaPredicted RBP13.13□□□□□ -0.31
VPS16-201ENST00000380443 KRTAP13-3Q3SY46 172 aa13.13□□□□□ -0.31
VPS16-201ENST00000380443 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
VPS16-201ENST00000380443 PRR4Q16378 134 aa13.11□□□□□ -0.31
VPS16-201ENST00000380443 KRTAP16-1A8MUX0 517 aa13.07□□□□□ -0.32
VPS16-201ENST00000380443 Q5W150 140 aa13.07□□□□□ -0.32
VPS16-201ENST00000380443 PCOTHQ58A44 107 aa13.06□□□□□ -0.32
VPS16-201ENST00000380443 Q5VSD8 79 aa13.05□□□□□ -0.32
VPS16-201ENST00000380443 KRTAP17-1Q9BYP8 105 aa13.03□□□□□ -0.32
VPS16-201ENST00000380443 Q1T7F1 81 aa12.97□□□□□ -0.33
VPS16-201ENST00000380443 KRTAP4-5Q9BYR2 181 aa12.97□□□□□ -0.33
VPS16-201ENST00000380443 FAT1Q14517 4588 aa12.95□□□□□ -0.34
VPS16-201ENST00000380443 V9GYY9 64 aa12.94□□□□□ -0.34
VPS16-201ENST00000380443 MPLKIPQ8TAP9 179 aa12.93□□□□□ -0.34
VPS16-201ENST00000380443 IGKV2-30P06310 120 aa12.9□□□□□ -0.34
VPS16-201ENST00000380443 COA5Q86WW8 74 aa12.9□□□□□ -0.34
VPS16-201ENST00000380443 PKHD1L1Q86WI1 4243 aa12.86□□□□□ -0.35
VPS16-201ENST00000380443 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
VPS16-201ENST00000380443 PCLOQ9Y6V0 5065 aa12.82□□□□□ -0.36
VPS16-201ENST00000380443 RETNLBQ9BQ08 111 aa12.8□□□□□ -0.36
VPS16-201ENST00000380443 HRES1P13985 223 aa12.79□□□□□ -0.36
VPS16-201ENST00000380443 ACYP2P14621 99 aa12.78□□□□□ -0.36
VPS16-201ENST00000380443 BRK1Q8WUW1 75 aa12.78□□□□□ -0.36
VPS16-201ENST00000380443 DMAC1Q96GE9 116 aa12.74□□□□□ -0.37
VPS16-201ENST00000380443 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
VPS16-201ENST00000380443 A8MUU9 505 aa12.71□□□□□ -0.38
VPS16-201ENST00000380443 KRTAP10-8P60410 259 aa12.7□□□□□ -0.38
VPS16-201ENST00000380443 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
VPS16-201ENST00000380443 C7orf65Q6ZTY9 151 aa12.66□□□□□ -0.38
VPS16-201ENST00000380443 FLG2Q5D862 2391 aaPredicted RBP12.61□□□□□ -0.39
VPS16-201ENST00000380443 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
VPS16-201ENST00000380443 PSPHP1O15172 72 aa12.61□□□□□ -0.39
VPS16-201ENST00000380443 MYCBP2O75592 4640 aa12.6□□□□□ -0.39
VPS16-201ENST00000380443 LINC01558Q9Y6Z2 57 aa12.6□□□□□ -0.39
VPS16-201ENST00000380443 A8MUN3 132 aa12.58□□□□□ -0.4
VPS16-201ENST00000380443 CHKB-CPT1BH3BT56 60 aa12.55□□□□□ -0.4
VPS16-201ENST00000380443 J3QL48 77 aa12.55□□□□□ -0.4
VPS16-201ENST00000380443 Q5VV11 94 aa12.54□□□□□ -0.4
VPS16-201ENST00000380443 PRR15LQ9BU68 103 aa12.54□□□□□ -0.4
VPS16-201ENST00000380443 Q75L30 129 aa12.53□□□□□ -0.4
VPS16-201ENST00000380443 SEC61GP60059 68 aa12.48□□□□□ -0.41
VPS16-201ENST00000380443 TNXBP22105 4242 aa12.47□□□□□ -0.41
VPS16-201ENST00000380443 LRP1Q07954 4544 aaKnown RBP12.46□□□□□ -0.41
VPS16-201ENST00000380443 FAT3Q8TDW7 4589 aa12.44□□□□□ -0.42
VPS16-201ENST00000380443 DMBT1Q9UGM3 2413 aaPredicted RBP12.42□□□□□ -0.42
VPS16-201ENST00000380443 PMAIP1Q13794 54 aa12.41□□□□□ -0.42
VPS16-201ENST00000380443 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
VPS16-201ENST00000380443 SPINK7P58062 85 aa12.34□□□□□ -0.43
VPS16-201ENST00000380443 ATP11AUNQ6ZP68 121 aa12.31□□□□□ -0.44
VPS16-201ENST00000380443 A6NED7 52 aa12.27□□□□□ -0.44
VPS16-201ENST00000380443 RPL37P61927 97 aaKnown RBP12.27□□□□□ -0.45
VPS16-201ENST00000380443 HERC1Q15751 4861 aa12.26□□□□□ -0.45
VPS16-201ENST00000380443 SPTSSBQ8NFR3 76 aa12.26□□□□□ -0.45
VPS16-201ENST00000380443 A0A1B0GU69 56 aa12.21□□□□□ -0.45
VPS16-201ENST00000380443 XP32Q5T750 250 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms