RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
RER1-202ENST00000378512 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
RER1-202ENST00000378512 A0A1B0GW54 56 aa8.81□□□□□ -1
RER1-202ENST00000378512 BATFQ16520 125 aa8.8□□□□□ -1
RER1-202ENST00000378512 C9orf118A6NHY6 69 aa8.79□□□□□ -1
RER1-202ENST00000378512 TAX1BP3O14907 124 aa8.79□□□□□ -1
RER1-202ENST00000378512 PDE6GP18545 87 aa8.79□□□□□ -1
RER1-202ENST00000378512 M0R2T5 61 aa8.78□□□□□ -1
RER1-202ENST00000378512 COX6B2Q6YFQ2 88 aa8.78□□□□□ -1
RER1-202ENST00000378512 A0A1B0GVX0 72 aa8.77□□□□□ -1.01
RER1-202ENST00000378512 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
RER1-202ENST00000378512 J3KT08 172 aa8.76□□□□□ -1.01
RER1-202ENST00000378512 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
RER1-202ENST00000378512 A0A1W2PPM0 123 aa8.74□□□□□ -1.01
RER1-202ENST00000378512 C14orf132Q9NPU4 83 aa8.73□□□□□ -1.01
RER1-202ENST00000378512 H3BT86 120 aa8.71□□□□□ -1.01
RER1-202ENST00000378512 A8MWP4 228 aa8.66□□□□□ -1.02
RER1-202ENST00000378512 NDUFB1O75438 58 aa8.64□□□□□ -1.03
RER1-202ENST00000378512 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
RER1-202ENST00000378512 IGKV3D-7A0A0C4DH55 119 aa8.63□□□□□ -1.03
RER1-202ENST00000378512 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
RER1-202ENST00000378512 MPLKIPQ8TAP9 179 aa8.63□□□□□ -1.03
RER1-202ENST00000378512 NREPQ16612 68 aa8.61□□□□□ -1.03
RER1-202ENST00000378512 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
RER1-202ENST00000378512 HRES1P13985 223 aa8.6□□□□□ -1.03
RER1-202ENST00000378512 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
RER1-202ENST00000378512 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
RER1-202ENST00000378512 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
RER1-202ENST00000378512 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
RER1-202ENST00000378512 COL5A1-AS1Q5SY13 56 aa8.58□□□□□ -1.04
RER1-202ENST00000378512 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
RER1-202ENST00000378512 Q6ZVQ6 151 aa8.54□□□□□ -1.04
RER1-202ENST00000378512 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
RER1-202ENST00000378512 KRTAP9-8Q9BYQ0 159 aa8.51□□□□□ -1.05
RER1-202ENST00000378512 K7EP34 96 aa8.5□□□□□ -1.05
RER1-202ENST00000378512 K7EQZ3 153 aa8.5□□□□□ -1.05
RER1-202ENST00000378512 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
RER1-202ENST00000378512 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
RER1-202ENST00000378512 USH2AO75445 5202 aa8.49□□□□□ -1.05
RER1-202ENST00000378512 SPINK7P58062 85 aa8.48□□□□□ -1.05
RER1-202ENST00000378512 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
RER1-202ENST00000378512 BPY2O14599 106 aa8.46□□□□□ -1.06
RER1-202ENST00000378512 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
RER1-202ENST00000378512 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
RER1-202ENST00000378512 SSPOA2VEC9 5147 aa8.44□□□□□ -1.06
RER1-202ENST00000378512 hDV103S1A0JD37 113 aa8.44□□□□□ -1.06
RER1-202ENST00000378512 LINC00846Q9NV44 126 aa8.39□□□□□ -1.07
RER1-202ENST00000378512 MT2AP02795 61 aa8.37□□□□□ -1.07
RER1-202ENST00000378512 GTF2H5Q6ZYL4 71 aa8.37□□□□□ -1.07
RER1-202ENST00000378512 Q8N9L7 120 aa8.37□□□□□ -1.07
RER1-202ENST00000378512 PCP4L1A6NKN8 68 aa8.36□□□□□ -1.07
RER1-202ENST00000378512 F8W1H4 67 aa8.36□□□□□ -1.07
RER1-202ENST00000378512 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
RER1-202ENST00000378512 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
RER1-202ENST00000378512 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
RER1-202ENST00000378512 MT1FP04733 61 aa8.32□□□□□ -1.08
RER1-202ENST00000378512 Q5W150 140 aa8.32□□□□□ -1.08
RER1-202ENST00000378512 CASC2Q6XLA1 102 aa8.32□□□□□ -1.08
RER1-202ENST00000378512 NDUFS5O43920 106 aa8.31□□□□□ -1.08
RER1-202ENST00000378512 ETDBQ3ZM63 59 aa8.29□□□□□ -1.08
RER1-202ENST00000378512 LCE2BO14633 110 aa8.28□□□□□ -1.08
RER1-202ENST00000378512 FCGBPQ9Y6R7 5405 aaPredicted RBP8.26□□□□□ -1.09
RER1-202ENST00000378512 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
RER1-202ENST00000378512 HCG22E2RYF7 251 aa8.26□□□□□ -1.09
RER1-202ENST00000378512 CXCL6P80162 114 aa8.24□□□□□ -1.09
RER1-202ENST00000378512 KRTAP9-3Q9BYQ3 159 aa8.24□□□□□ -1.09
RER1-202ENST00000378512 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
RER1-202ENST00000378512 KRTAP10-10P60014 251 aa8.21□□□□□ -1.09
RER1-202ENST00000378512 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
RER1-202ENST00000378512 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
RER1-202ENST00000378512 KRTAP19-1Q8IUB9 90 aa8.2□□□□□ -1.1
RER1-202ENST00000378512 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
RER1-202ENST00000378512 ACYP1P07311 99 aa8.12□□□□□ -1.11
RER1-202ENST00000378512 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
RER1-202ENST00000378512 TP53AIP1Q9HCN2 124 aa8.12□□□□□ -1.11
RER1-202ENST00000378512 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
RER1-202ENST00000378512 KRTAP3-1Q9BYR8 98 aa8.04□□□□□ -1.12
RER1-202ENST00000378512 ATP5EP2Q5VTU8 51 aa8.03□□□□□ -1.12
RER1-202ENST00000378512 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
RER1-202ENST00000378512 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.13
RER1-202ENST00000378512 A0A1B0GV90 55 aa7.95□□□□□ -1.14
RER1-202ENST00000378512 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
RER1-202ENST00000378512 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
RER1-202ENST00000378512 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
RER1-202ENST00000378512 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
RER1-202ENST00000378512 LINC00643Q86TS7 51 aa7.92□□□□□ -1.14
RER1-202ENST00000378512 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
RER1-202ENST00000378512 S4R3F8 94 aa7.89□□□□□ -1.15
RER1-202ENST00000378512 LOC101927531A0A1B0GV80 90 aa7.88□□□□□ -1.15
RER1-202ENST00000378512 UQCRQO14949 82 aa7.86□□□□□ -1.15
RER1-202ENST00000378512 LCA10Q71F78 164 aa7.86□□□□□ -1.15
RER1-202ENST00000378512 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
RER1-202ENST00000378512 A0A087WVE0 104 aa7.85□□□□□ -1.15
RER1-202ENST00000378512 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
RER1-202ENST00000378512 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
RER1-202ENST00000378512 ATOX1O00244 68 aa7.81□□□□□ -1.16
RER1-202ENST00000378512 H0Y9P7 68 aa7.8□□□□□ -1.16
RER1-202ENST00000378512 OCR1Q9BZK8 76 aa7.77□□□□□ -1.17
RER1-202ENST00000378512 J3QR89 54 aa7.73□□□□□ -1.17
RER1-202ENST00000378512 FAM236AA0A1B0GUQ0 79 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms