RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 S4R3F8 94 aa6.57□□□□□ -1.36
RPGR-203ENST00000378505 ASB16-AS1Q495Z4 193 aa6.56□□□□□ -1.36
RPGR-203ENST00000378505 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
RPGR-203ENST00000378505 KRTAP13-1Q8IUC0 172 aa6.54□□□□□ -1.36
RPGR-203ENST00000378505 CRYBG3Q68DQ2 2970 aa6.53□□□□□ -1.36
RPGR-203ENST00000378505 Q5VSD8 79 aa6.53□□□□□ -1.36
RPGR-203ENST00000378505 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
RPGR-203ENST00000378505 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
RPGR-203ENST00000378505 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
RPGR-203ENST00000378505 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.37
RPGR-203ENST00000378505 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.37
RPGR-203ENST00000378505 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
RPGR-203ENST00000378505 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
RPGR-203ENST00000378505 R4GN34 69 aa6.44□□□□□ -1.38
RPGR-203ENST00000378505 MXRA5Q9NR99 2828 aa6.44□□□□□ -1.38
RPGR-203ENST00000378505 KRTAP13-2Q52LG2 175 aa6.44□□□□□ -1.38
RPGR-203ENST00000378505 LUZP6Q538Z0 58 aa6.44□□□□□ -1.38
RPGR-203ENST00000378505 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
RPGR-203ENST00000378505 TENM3Q9P273 2699 aa6.41□□□□□ -1.38
RPGR-203ENST00000378505 M0R2T5 61 aa6.38□□□□□ -1.39
RPGR-203ENST00000378505 MYO15AQ9UKN7 3530 aa6.38□□□□□ -1.39
RPGR-203ENST00000378505 ROMO1P60602 79 aa6.38□□□□□ -1.39
RPGR-203ENST00000378505 M0QZ58 72 aa6.32□□□□□ -1.4
RPGR-203ENST00000378505 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
RPGR-203ENST00000378505 A6NN06 94 aa6.3□□□□□ -1.4
RPGR-203ENST00000378505 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
RPGR-203ENST00000378505 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
RPGR-203ENST00000378505 DCHS1Q96JQ0 3298 aa6.25□□□□□ -1.41
RPGR-203ENST00000378505 A8MU10 97 aa6.24□□□□□ -1.41
RPGR-203ENST00000378505 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
RPGR-203ENST00000378505 A8MUU9 505 aa6.22□□□□□ -1.41
RPGR-203ENST00000378505 RELNP78509 3460 aa6.21□□□□□ -1.41
RPGR-203ENST00000378505 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
RPGR-203ENST00000378505 H3BS24 57 aa6.19□□□□□ -1.42
RPGR-203ENST00000378505 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
RPGR-203ENST00000378505 PDZD2O15018 2839 aa6.17□□□□□ -1.42
RPGR-203ENST00000378505 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
RPGR-203ENST00000378505 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.43
RPGR-203ENST00000378505 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
RPGR-203ENST00000378505 TGP01266 2768 aa6.11□□□□□ -1.43
RPGR-203ENST00000378505 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
RPGR-203ENST00000378505 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
RPGR-203ENST00000378505 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
RPGR-203ENST00000378505 FBN1P35555 2871 aaKnown RBP6.05□□□□□ -1.44
RPGR-203ENST00000378505 VWFP04275 2813 aa6.05□□□□□ -1.44
RPGR-203ENST00000378505 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
RPGR-203ENST00000378505 LAMA5O15230 3695 aa6.02□□□□□ -1.45
RPGR-203ENST00000378505 XP32Q5T750 250 aa6□□□□□ -1.45
RPGR-203ENST00000378505 OTOGQ6ZRI0 2925 aa5.98□□□□□ -1.45
RPGR-203ENST00000378505 ASPMQ8IZT6 3477 aa5.98□□□□□ -1.45
RPGR-203ENST00000378505 ZFHX4Q86UP3 3567 aa5.96□□□□□ -1.45
RPGR-203ENST00000378505 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
RPGR-203ENST00000378505 H0YAA0 97 aa5.93□□□□□ -1.46
RPGR-203ENST00000378505 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
RPGR-203ENST00000378505 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
RPGR-203ENST00000378505 TNP1P09430 55 aa5.87□□□□□ -1.47
RPGR-203ENST00000378505 SRRM2Q9UQ35 2752 aaKnown RBP5.85□□□□□ -1.47
RPGR-203ENST00000378505 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
RPGR-203ENST00000378505 CSMD1Q96PZ7 3565 aa5.85□□□□□ -1.47
RPGR-203ENST00000378505 DMDP11532 3685 aa5.82□□□□□ -1.48
RPGR-203ENST00000378505 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
RPGR-203ENST00000378505 SMG1Q96Q15 3661 aaKnown RBP5.8□□□□□ -1.48
RPGR-203ENST00000378505 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
RPGR-203ENST00000378505 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
RPGR-203ENST00000378505 P0C880 135 aa5.78□□□□□ -1.48
RPGR-203ENST00000378505 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
RPGR-203ENST00000378505 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
RPGR-203ENST00000378505 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
RPGR-203ENST00000378505 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
RPGR-203ENST00000378505 SVEP1Q4LDE5 3571 aa5.68□□□□□ -1.5
RPGR-203ENST00000378505 MEGF8Q7Z7M0 2845 aa5.67□□□□□ -1.5
RPGR-203ENST00000378505 CUBNO60494 3623 aa5.66□□□□□ -1.5
RPGR-203ENST00000378505 COL7A1Q02388 2944 aa5.65□□□□□ -1.5
RPGR-203ENST00000378505 CSMD2Q7Z408 3487 aa5.63□□□□□ -1.51
RPGR-203ENST00000378505 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
RPGR-203ENST00000378505 ANK3Q12955 4377 aaKnown RBP5.59□□□□□ -1.52
RPGR-203ENST00000378505 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
RPGR-203ENST00000378505 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
RPGR-203ENST00000378505 SPENQ96T58 3664 aaKnown RBP5.55□□□□□ -1.52
RPGR-203ENST00000378505 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
RPGR-203ENST00000378505 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
RPGR-203ENST00000378505 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
RPGR-203ENST00000378505 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
RPGR-203ENST00000378505 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
RPGR-203ENST00000378505 BSNQ9UPA5 3926 aa5.4□□□□□ -1.54
RPGR-203ENST00000378505 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
RPGR-203ENST00000378505 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
RPGR-203ENST00000378505 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
RPGR-203ENST00000378505 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
RPGR-203ENST00000378505 HUWE1Q7Z6Z7 4374 aaKnown RBP5.22□□□□□ -1.57
RPGR-203ENST00000378505 VPS13CQ709C8 3753 aa5.22□□□□□ -1.57
RPGR-203ENST00000378505 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
RPGR-203ENST00000378505 ZNF469Q96JG9 3925 aaPredicted RBP5.06□□□□□ -1.6
RPGR-203ENST00000378505 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
RPGR-203ENST00000378505 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
RPGR-203ENST00000378505 DNAH9Q9NYC9 4486 aa5.01□□□□□ -1.61
RPGR-203ENST00000378505 DNAH5Q8TE73 4624 aa4.98□□□□□ -1.61
RPGR-203ENST00000378505 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
RPGR-203ENST00000378505 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
RPGR-203ENST00000378505 KRTAP10-12P60413 245 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms