RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 A0A1B0GVX0 72 aa7.85□□□□□ -1.15
RAB4B-202ENST00000378307 JMJD7-PLA2G4BH0Y9G9 81 aa7.85□□□□□ -1.15
RAB4B-202ENST00000378307 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
RAB4B-202ENST00000378307 C14orf132Q9NPU4 83 aa7.83□□□□□ -1.16
RAB4B-202ENST00000378307 TAX1BP3O14907 124 aa7.82□□□□□ -1.16
RAB4B-202ENST00000378307 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
RAB4B-202ENST00000378307 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
RAB4B-202ENST00000378307 C9orf118A6NHY6 69 aa7.8□□□□□ -1.16
RAB4B-202ENST00000378307 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
RAB4B-202ENST00000378307 J3KT08 172 aa7.79□□□□□ -1.16
RAB4B-202ENST00000378307 C21orf62-AS1Q17RA5 79 aa7.78□□□□□ -1.16
RAB4B-202ENST00000378307 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
RAB4B-202ENST00000378307 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
RAB4B-202ENST00000378307 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.17
RAB4B-202ENST00000378307 HRES1P13985 223 aa7.77□□□□□ -1.17
RAB4B-202ENST00000378307 PDE6GP18545 87 aa7.77□□□□□ -1.17
RAB4B-202ENST00000378307 A0A1B0GW54 56 aa7.76□□□□□ -1.17
RAB4B-202ENST00000378307 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
RAB4B-202ENST00000378307 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
RAB4B-202ENST00000378307 A8MWP4 228 aa7.74□□□□□ -1.17
RAB4B-202ENST00000378307 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
RAB4B-202ENST00000378307 H3BT86 120 aa7.72□□□□□ -1.17
RAB4B-202ENST00000378307 NDUFB1O75438 58 aa7.72□□□□□ -1.17
RAB4B-202ENST00000378307 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
RAB4B-202ENST00000378307 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
RAB4B-202ENST00000378307 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
RAB4B-202ENST00000378307 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
RAB4B-202ENST00000378307 NREPQ16612 68 aa7.7□□□□□ -1.18
RAB4B-202ENST00000378307 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
RAB4B-202ENST00000378307 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
RAB4B-202ENST00000378307 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
RAB4B-202ENST00000378307 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
RAB4B-202ENST00000378307 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
RAB4B-202ENST00000378307 Q6ZVQ6 151 aa7.66□□□□□ -1.18
RAB4B-202ENST00000378307 SPINK7P58062 85 aa7.65□□□□□ -1.18
RAB4B-202ENST00000378307 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
RAB4B-202ENST00000378307 SPCS1Q9Y6A9 102 aa7.65□□□□□ -1.18
RAB4B-202ENST00000378307 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
RAB4B-202ENST00000378307 K7EQZ3 153 aa7.63□□□□□ -1.19
RAB4B-202ENST00000378307 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
RAB4B-202ENST00000378307 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.19
RAB4B-202ENST00000378307 COL5A1-AS1Q5SY13 56 aa7.58□□□□□ -1.2
RAB4B-202ENST00000378307 PRO0461Q9UI25 63 aa7.58□□□□□ -1.2
RAB4B-202ENST00000378307 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
RAB4B-202ENST00000378307 BPY2O14599 106 aa7.56□□□□□ -1.2
RAB4B-202ENST00000378307 MT2AP02795 61 aa7.56□□□□□ -1.2
RAB4B-202ENST00000378307 Q8N9L7 120 aa7.55□□□□□ -1.2
RAB4B-202ENST00000378307 K7EP34 96 aa7.53□□□□□ -1.2
RAB4B-202ENST00000378307 WFDC13Q8IUB5 93 aa7.53□□□□□ -1.2
RAB4B-202ENST00000378307 MT1FP04733 61 aa7.52□□□□□ -1.21
RAB4B-202ENST00000378307 USH2AO75445 5202 aa7.51□□□□□ -1.21
RAB4B-202ENST00000378307 NDUFS5O43920 106 aa7.51□□□□□ -1.21
RAB4B-202ENST00000378307 Q5W150 140 aa7.49□□□□□ -1.21
RAB4B-202ENST00000378307 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
RAB4B-202ENST00000378307 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
RAB4B-202ENST00000378307 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
RAB4B-202ENST00000378307 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
RAB4B-202ENST00000378307 A0A1B0GV90 55 aa7.43□□□□□ -1.22
RAB4B-202ENST00000378307 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
RAB4B-202ENST00000378307 HCG22E2RYF7 251 aa7.42□□□□□ -1.22
RAB4B-202ENST00000378307 IGKV2D-30A0A075B6S6 120 aa7.41□□□□□ -1.22
RAB4B-202ENST00000378307 LCE2BO14633 110 aa7.41□□□□□ -1.22
RAB4B-202ENST00000378307 IGKV2-30P06310 120 aa7.41□□□□□ -1.22
RAB4B-202ENST00000378307 UBL5Q9BZL1 73 aa7.41□□□□□ -1.22
RAB4B-202ENST00000378307 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
RAB4B-202ENST00000378307 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
RAB4B-202ENST00000378307 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
RAB4B-202ENST00000378307 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
RAB4B-202ENST00000378307 F8W1H4 67 aa7.37□□□□□ -1.23
RAB4B-202ENST00000378307 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
RAB4B-202ENST00000378307 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
RAB4B-202ENST00000378307 CXCL6P80162 114 aa7.33□□□□□ -1.24
RAB4B-202ENST00000378307 C4orf26Q17RF5 130 aa7.3□□□□□ -1.24
RAB4B-202ENST00000378307 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
RAB4B-202ENST00000378307 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
RAB4B-202ENST00000378307 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
RAB4B-202ENST00000378307 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
RAB4B-202ENST00000378307 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
RAB4B-202ENST00000378307 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
RAB4B-202ENST00000378307 ACYP1P07311 99 aa7.14□□□□□ -1.27
RAB4B-202ENST00000378307 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
RAB4B-202ENST00000378307 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
RAB4B-202ENST00000378307 CYP4F30PQ9H0H9 118 aa7.11□□□□□ -1.27
RAB4B-202ENST00000378307 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
RAB4B-202ENST00000378307 LCA10Q71F78 164 aa7.1□□□□□ -1.27
RAB4B-202ENST00000378307 S4R3F8 94 aa7.1□□□□□ -1.27
RAB4B-202ENST00000378307 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
RAB4B-202ENST00000378307 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
RAB4B-202ENST00000378307 TRAV22A0A0B4J277 110 aa7.06□□□□□ -1.28
RAB4B-202ENST00000378307 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
RAB4B-202ENST00000378307 A0A087WVE0 104 aa7.04□□□□□ -1.28
RAB4B-202ENST00000378307 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
RAB4B-202ENST00000378307 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
RAB4B-202ENST00000378307 FAM236AA0A1B0GUQ0 79 aa6.99□□□□□ -1.29
RAB4B-202ENST00000378307 FAM236BA0A1B0GV22 79 aa6.99□□□□□ -1.29
RAB4B-202ENST00000378307 UQCRQO14949 82 aa6.99□□□□□ -1.29
RAB4B-202ENST00000378307 LINC00643Q86TS7 51 aa6.99□□□□□ -1.29
RAB4B-202ENST00000378307 H0Y9P7 68 aa6.98□□□□□ -1.29
RAB4B-202ENST00000378307 ATOX1O00244 68 aa6.91□□□□□ -1.3
RAB4B-202ENST00000378307 MT1BP07438 61 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms