RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
TDP2-202ENST00000378198 CIRBP-AS1Q8TBR5 109 aa10.7□□□□□ -0.7
TDP2-202ENST00000378198 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
TDP2-202ENST00000378198 LY6G6CO95867 125 aa10.68□□□□□ -0.7
TDP2-202ENST00000378198 Q5VV11 94 aa10.67□□□□□ -0.7
TDP2-202ENST00000378198 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
TDP2-202ENST00000378198 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
TDP2-202ENST00000378198 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
TDP2-202ENST00000378198 C8orf87E5RJ46 101 aa10.63□□□□□ -0.71
TDP2-202ENST00000378198 FBN3Q75N90 2809 aa10.62□□□□□ -0.71
TDP2-202ENST00000378198 PRR15LQ9BU68 103 aa10.61□□□□□ -0.71
TDP2-202ENST00000378198 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
TDP2-202ENST00000378198 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
TDP2-202ENST00000378198 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
TDP2-202ENST00000378198 Q5W150 140 aa10.59□□□□□ -0.71
TDP2-202ENST00000378198 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
TDP2-202ENST00000378198 HRES1P13985 223 aa10.56□□□□□ -0.72
TDP2-202ENST00000378198 Q75L30 129 aa10.55□□□□□ -0.72
TDP2-202ENST00000378198 LINC01558Q9Y6Z2 57 aa10.53□□□□□ -0.72
TDP2-202ENST00000378198 LINC00313P59037 77 aa10.53□□□□□ -0.72
TDP2-202ENST00000378198 Q6ZSA8 131 aa10.52□□□□□ -0.73
TDP2-202ENST00000378198 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
TDP2-202ENST00000378198 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
TDP2-202ENST00000378198 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
TDP2-202ENST00000378198 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
TDP2-202ENST00000378198 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
TDP2-202ENST00000378198 KRTAP10-1P60331 282 aa10.48□□□□□ -0.73
TDP2-202ENST00000378198 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
TDP2-202ENST00000378198 TGP01266 2768 aa10.46□□□□□ -0.73
TDP2-202ENST00000378198 A8MU10 97 aa10.44□□□□□ -0.74
TDP2-202ENST00000378198 DNAH5Q8TE73 4624 aa10.44□□□□□ -0.74
TDP2-202ENST00000378198 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
TDP2-202ENST00000378198 A6NED7 52 aa10.43□□□□□ -0.74
TDP2-202ENST00000378198 ACYP2P14621 99 aa10.43□□□□□ -0.74
TDP2-202ENST00000378198 KRTAP1-4P0C5Y4 121 aa10.4□□□□□ -0.75
TDP2-202ENST00000378198 LCA10Q71F78 164 aa10.38□□□□□ -0.75
TDP2-202ENST00000378198 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
TDP2-202ENST00000378198 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
TDP2-202ENST00000378198 PMAIP1Q13794 54 aa10.37□□□□□ -0.75
TDP2-202ENST00000378198 DMAC1Q96GE9 116 aa10.37□□□□□ -0.75
TDP2-202ENST00000378198 PRR26Q8N8Z3 221 aa10.37□□□□□ -0.75
TDP2-202ENST00000378198 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
TDP2-202ENST00000378198 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
TDP2-202ENST00000378198 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
TDP2-202ENST00000378198 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
TDP2-202ENST00000378198 PKD1P98161 4303 aa10.31□□□□□ -0.76
TDP2-202ENST00000378198 PLA2G1BP04054 148 aaKnown RBP10.3□□□□□ -0.76
TDP2-202ENST00000378198 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
TDP2-202ENST00000378198 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
TDP2-202ENST00000378198 SPINK1P00995 79 aa10.27□□□□□ -0.76
TDP2-202ENST00000378198 SPINK7P58062 85 aa10.26□□□□□ -0.77
TDP2-202ENST00000378198 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
TDP2-202ENST00000378198 DNHD1Q96M86 4753 aa10.25□□□□□ -0.77
TDP2-202ENST00000378198 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
TDP2-202ENST00000378198 FAT2Q9NYQ8 4349 aa10.2□□□□□ -0.78
TDP2-202ENST00000378198 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
TDP2-202ENST00000378198 RPS29P62273 56 aaKnown RBP10.17□□□□□ -0.78
TDP2-202ENST00000378198 A6NN06 94 aa10.16□□□□□ -0.78
TDP2-202ENST00000378198 A0A1B0GU69 56 aa10.14□□□□□ -0.79
TDP2-202ENST00000378198 KTN1-AS1Q86SY8 53 aa10.14□□□□□ -0.79
TDP2-202ENST00000378198 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
TDP2-202ENST00000378198 C7orf65Q6ZTY9 151 aa10.11□□□□□ -0.79
TDP2-202ENST00000378198 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
TDP2-202ENST00000378198 SEC61GP60059 68 aa10.06□□□□□ -0.8
TDP2-202ENST00000378198 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
TDP2-202ENST00000378198 SACSQ9NZJ4 4579 aa10□□□□□ -0.81
TDP2-202ENST00000378198 SMR3BP02814 79 aaPredicted RBP9.98□□□□□ -0.81
TDP2-202ENST00000378198 SPATA8Q6RVD6 105 aa9.98□□□□□ -0.81
TDP2-202ENST00000378198 UQCR11O14957 56 aa9.96□□□□□ -0.81
TDP2-202ENST00000378198 Q8N1X5 172 aa9.94□□□□□ -0.82
TDP2-202ENST00000378198 A8MUU9 505 aa9.93□□□□□ -0.82
TDP2-202ENST00000378198 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
TDP2-202ENST00000378198 C20orf166-AS1Q96NR2 134 aa9.92□□□□□ -0.82
TDP2-202ENST00000378198 A0A1B0GVY2 172 aa9.91□□□□□ -0.82
TDP2-202ENST00000378198 KRTAP10-4P60372 401 aaPredicted RBP9.9□□□□□ -0.82
TDP2-202ENST00000378198 C9orf92A6NGG3 77 aa9.89□□□□□ -0.83
TDP2-202ENST00000378198 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
TDP2-202ENST00000378198 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
TDP2-202ENST00000378198 PKHD1P08F94 4074 aa9.83□□□□□ -0.84
TDP2-202ENST00000378198 PKHD1L1Q86WI1 4243 aa9.77□□□□□ -0.85
TDP2-202ENST00000378198 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
TDP2-202ENST00000378198 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
TDP2-202ENST00000378198 FAT1Q14517 4588 aa9.66□□□□□ -0.86
TDP2-202ENST00000378198 PRAC1Q96KF2 57 aa9.63□□□□□ -0.87
TDP2-202ENST00000378198 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
TDP2-202ENST00000378198 ADM2Q7Z4H4 148 aa9.62□□□□□ -0.87
TDP2-202ENST00000378198 A0A1B0GU33 70 aa9.58□□□□□ -0.88
TDP2-202ENST00000378198 H0YAA0 97 aa9.58□□□□□ -0.88
TDP2-202ENST00000378198 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
TDP2-202ENST00000378198 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
TDP2-202ENST00000378198 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
TDP2-202ENST00000378198 RYR2Q92736 4967 aa9.54□□□□□ -0.88
TDP2-202ENST00000378198 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
TDP2-202ENST00000378198 Q5VSD8 79 aa9.46□□□□□ -0.89
TDP2-202ENST00000378198 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.89
TDP2-202ENST00000378198 CSAG1Q6PB30 78 aa9.4□□□□□ -0.91
TDP2-202ENST00000378198 XP32Q5T750 250 aa9.39□□□□□ -0.91
TDP2-202ENST00000378198 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
TDP2-202ENST00000378198 TNXBP22105 4242 aa9.38□□□□□ -0.91
TDP2-202ENST00000378198 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms