RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 A8MUU9 505 aa9.64□□□□□ -0.87
ATXN2-201ENST00000377617 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
ATXN2-201ENST00000377617 SEC61BP60468 96 aaKnown RBP9.62□□□□□ -0.87
ATXN2-201ENST00000377617 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
ATXN2-201ENST00000377617 M0R2T5 61 aa9.61□□□□□ -0.87
ATXN2-201ENST00000377617 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
ATXN2-201ENST00000377617 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
ATXN2-201ENST00000377617 TEP1Q99973 2627 aaKnown RBP9.57□□□□□ -0.88
ATXN2-201ENST00000377617 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
ATXN2-201ENST00000377617 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
ATXN2-201ENST00000377617 RPS29P62273 56 aaKnown RBP9.49□□□□□ -0.89
ATXN2-201ENST00000377617 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
ATXN2-201ENST00000377617 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
ATXN2-201ENST00000377617 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
ATXN2-201ENST00000377617 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
ATXN2-201ENST00000377617 ZANQ9Y493 2812 aa9.4□□□□□ -0.91
ATXN2-201ENST00000377617 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
ATXN2-201ENST00000377617 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
ATXN2-201ENST00000377617 UBR5O95071 2799 aaPredicted RBP9.38□□□□□ -0.91
ATXN2-201ENST00000377617 FLNCQ14315 2725 aa9.36□□□□□ -0.91
ATXN2-201ENST00000377617 NSD1Q96L73 2696 aaPredicted RBP9.34□□□□□ -0.91
ATXN2-201ENST00000377617 SMG1Q96Q15 3661 aaKnown RBP9.33□□□□□ -0.92
ATXN2-201ENST00000377617 APCP25054 2843 aa9.31□□□□□ -0.92
ATXN2-201ENST00000377617 PP632Q6XCG6 107 aa9.3□□□□□ -0.92
ATXN2-201ENST00000377617 CUBNO60494 3623 aa9.3□□□□□ -0.92
ATXN2-201ENST00000377617 FBN2P35556 2912 aa9.29□□□□□ -0.92
ATXN2-201ENST00000377617 CELSR2Q9HCU4 2923 aa9.29□□□□□ -0.92
ATXN2-201ENST00000377617 UTP20O75691 2785 aaKnown RBP9.29□□□□□ -0.92
ATXN2-201ENST00000377617 RELNP78509 3460 aa9.29□□□□□ -0.92
ATXN2-201ENST00000377617 TNP1P09430 55 aa9.27□□□□□ -0.93
ATXN2-201ENST00000377617 Q5VSD8 79 aa9.26□□□□□ -0.93
ATXN2-201ENST00000377617 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
ATXN2-201ENST00000377617 NF1P21359 2839 aa9.25□□□□□ -0.93
ATXN2-201ENST00000377617 LAMA5O15230 3695 aa9.25□□□□□ -0.93
ATXN2-201ENST00000377617 KRTAP13-2Q52LG2 175 aa9.23□□□□□ -0.93
ATXN2-201ENST00000377617 P0C880 135 aa9.23□□□□□ -0.93
ATXN2-201ENST00000377617 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
ATXN2-201ENST00000377617 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
ATXN2-201ENST00000377617 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
ATXN2-201ENST00000377617 CRYBG3Q68DQ2 2970 aa9.19□□□□□ -0.94
ATXN2-201ENST00000377617 H0YAA0 97 aa9.19□□□□□ -0.94
ATXN2-201ENST00000377617 HIVEP1P15822 2718 aa9.18□□□□□ -0.94
ATXN2-201ENST00000377617 DMDP11532 3685 aa9.18□□□□□ -0.94
ATXN2-201ENST00000377617 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
ATXN2-201ENST00000377617 DCHS2Q6V1P9 2916 aa9.16□□□□□ -0.94
ATXN2-201ENST00000377617 CELSR1Q9NYQ6 3014 aa9.14□□□□□ -0.95
ATXN2-201ENST00000377617 MUC3AQ02505 3323 aa9.13□□□□□ -0.95
ATXN2-201ENST00000377617 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
ATXN2-201ENST00000377617 ITPR2Q14571 2701 aa8.97□□□□□ -0.97
ATXN2-201ENST00000377617 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
ATXN2-201ENST00000377617 NIPBLQ6KC79 2804 aaeCLIP8.89□□□□□ -0.99
ATXN2-201ENST00000377617 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
ATXN2-201ENST00000377617 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
ATXN2-201ENST00000377617 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
ATXN2-201ENST00000377617 XP32Q5T750 250 aa8.65□□□□□ -1.03
ATXN2-201ENST00000377617 TENM3Q9P273 2699 aa8.6□□□□□ -1.03
ATXN2-201ENST00000377617 PDZD2O15018 2839 aa8.59□□□□□ -1.03
ATXN2-201ENST00000377617 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
ATXN2-201ENST00000377617 TGP01266 2768 aa8.58□□□□□ -1.04
ATXN2-201ENST00000377617 CSMD2Q7Z408 3487 aa8.53□□□□□ -1.04
ATXN2-201ENST00000377617 TPRXLQ17RH7 258 aa8.51□□□□□ -1.05
ATXN2-201ENST00000377617 VWFP04275 2813 aa8.5□□□□□ -1.05
ATXN2-201ENST00000377617 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
ATXN2-201ENST00000377617 PKD1L1Q8TDX9 2849 aa8.46□□□□□ -1.06
ATXN2-201ENST00000377617 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
ATXN2-201ENST00000377617 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
ATXN2-201ENST00000377617 KRTAP13-4Q3LI77 160 aa8.4□□□□□ -1.06
ATXN2-201ENST00000377617 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
ATXN2-201ENST00000377617 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
ATXN2-201ENST00000377617 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
ATXN2-201ENST00000377617 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
ATXN2-201ENST00000377617 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
ATXN2-201ENST00000377617 ZFHX3Q15911 3703 aa8.29□□□□□ -1.08
ATXN2-201ENST00000377617 TENM2Q9NT68 2774 aa8.19□□□□□ -1.1
ATXN2-201ENST00000377617 INE1O15225 51 aa8.18□□□□□ -1.1
ATXN2-201ENST00000377617 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
ATXN2-201ENST00000377617 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
ATXN2-201ENST00000377617 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
ATXN2-201ENST00000377617 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
ATXN2-201ENST00000377617 BSNQ9UPA5 3926 aa8.13□□□□□ -1.11
ATXN2-201ENST00000377617 VPS13CQ709C8 3753 aa8.08□□□□□ -1.12
ATXN2-201ENST00000377617 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
ATXN2-201ENST00000377617 NBPF19A0A087WUL8 3843 aa8.02□□□□□ -1.13
ATXN2-201ENST00000377617 COL7A1Q02388 2944 aa8.01□□□□□ -1.13
ATXN2-201ENST00000377617 FBN3Q75N90 2809 aa7.96□□□□□ -1.14
ATXN2-201ENST00000377617 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
ATXN2-201ENST00000377617 CSMD3Q7Z407 3707 aa7.85□□□□□ -1.15
ATXN2-201ENST00000377617 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
ATXN2-201ENST00000377617 ANK3Q12955 4377 aaKnown RBP7.74□□□□□ -1.17
ATXN2-201ENST00000377617 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
ATXN2-201ENST00000377617 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
ATXN2-201ENST00000377617 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
ATXN2-201ENST00000377617 ZNF469Q96JG9 3925 aaPredicted RBP7.56□□□□□ -1.2
ATXN2-201ENST00000377617 AKAP9Q99996 3911 aa7.49□□□□□ -1.21
ATXN2-201ENST00000377617 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
ATXN2-201ENST00000377617 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
ATXN2-201ENST00000377617 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
ATXN2-201ENST00000377617 DNAH10Q8IVF4 4471 aa7.13□□□□□ -1.27
ATXN2-201ENST00000377617 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
ATXN2-201ENST00000377617 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms