RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 A8MWP4 228 aa11.7□□□□□ -0.54
CBWD3-202ENST00000377342 IGKV3D-7A0A0C4DH55 119 aa11.68□□□□□ -0.54
CBWD3-202ENST00000377342 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
CBWD3-202ENST00000377342 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
CBWD3-202ENST00000377342 K7EQZ3 153 aa11.66□□□□□ -0.54
CBWD3-202ENST00000377342 NOTCH2NLQ7Z3S9 236 aa11.66□□□□□ -0.54
CBWD3-202ENST00000377342 K7ERU9 68 aa11.65□□□□□ -0.55
CBWD3-202ENST00000377342 PRR15Q8IV56 129 aa11.64□□□□□ -0.55
CBWD3-202ENST00000377342 Q8N9L7 120 aa11.64□□□□□ -0.55
CBWD3-202ENST00000377342 NDUFB1O75438 58 aa11.62□□□□□ -0.55
CBWD3-202ENST00000377342 CDIP1Q9H305 208 aa11.62□□□□□ -0.55
CBWD3-202ENST00000377342 CXCL6P80162 114 aa11.62□□□□□ -0.55
CBWD3-202ENST00000377342 XP32Q5T750 250 aa11.62□□□□□ -0.55
CBWD3-202ENST00000377342 LINC00313P59037 77 aa11.59□□□□□ -0.55
CBWD3-202ENST00000377342 LINC00643Q86TS7 51 aa11.59□□□□□ -0.55
CBWD3-202ENST00000377342 KRTAP16-1A8MUX0 517 aa11.58□□□□□ -0.56
CBWD3-202ENST00000377342 C8orf87E5RJ46 101 aa11.58□□□□□ -0.56
CBWD3-202ENST00000377342 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
CBWD3-202ENST00000377342 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
CBWD3-202ENST00000377342 MMP24-AS1A0A0U1RRL7 71 aa11.55□□□□□ -0.56
CBWD3-202ENST00000377342 C20orf166-AS1Q96NR2 134 aa11.48□□□□□ -0.57
CBWD3-202ENST00000377342 A8MUU9 505 aa11.46□□□□□ -0.58
CBWD3-202ENST00000377342 RPL37P61927 97 aaKnown RBP11.46□□□□□ -0.58
CBWD3-202ENST00000377342 UBR4Q5T4S7 5183 aa11.45□□□□□ -0.58
CBWD3-202ENST00000377342 Q75L30 129 aa11.44□□□□□ -0.58
CBWD3-202ENST00000377342 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
CBWD3-202ENST00000377342 MUC17Q685J3 4493 aa11.43□□□□□ -0.58
CBWD3-202ENST00000377342 hDV103S1A0JD37 113 aa11.43□□□□□ -0.58
CBWD3-202ENST00000377342 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
CBWD3-202ENST00000377342 HCG22E2RYF7 251 aa11.42□□□□□ -0.58
CBWD3-202ENST00000377342 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
CBWD3-202ENST00000377342 CASC2Q6XLA1 102 aa11.4□□□□□ -0.58
CBWD3-202ENST00000377342 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.59
CBWD3-202ENST00000377342 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.59
CBWD3-202ENST00000377342 A0A087WVE0 104 aa11.38□□□□□ -0.59
CBWD3-202ENST00000377342 MT-ATP8P03928 68 aa11.38□□□□□ -0.59
CBWD3-202ENST00000377342 PCOTHQ58A44 107 aa11.33□□□□□ -0.6
CBWD3-202ENST00000377342 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
CBWD3-202ENST00000377342 NDUFS5O43920 106 aa11.26□□□□□ -0.61
CBWD3-202ENST00000377342 ATP11AUNQ6ZP68 121 aa11.26□□□□□ -0.61
CBWD3-202ENST00000377342 IMUPQ9GZP8 106 aa11.26□□□□□ -0.61
CBWD3-202ENST00000377342 RNF213Q63HN8 5207 aa11.23□□□□□ -0.61
CBWD3-202ENST00000377342 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
CBWD3-202ENST00000377342 KRTAP4-1Q9BYQ7 146 aa11.22□□□□□ -0.61
CBWD3-202ENST00000377342 MUC2Q02817 5179 aa11.16□□□□□ -0.62
CBWD3-202ENST00000377342 Q5W150 140 aa11.16□□□□□ -0.62
CBWD3-202ENST00000377342 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
CBWD3-202ENST00000377342 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
CBWD3-202ENST00000377342 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
CBWD3-202ENST00000377342 OCR1Q9BZK8 76 aa11.08□□□□□ -0.64
CBWD3-202ENST00000377342 UQCRQO14949 82 aa11.01□□□□□ -0.65
CBWD3-202ENST00000377342 SCGB1A1P11684 91 aa11.01□□□□□ -0.65
CBWD3-202ENST00000377342 TRAV22A0A0B4J277 110 aa11□□□□□ -0.65
CBWD3-202ENST00000377342 SPINK7P58062 85 aa10.99□□□□□ -0.65
CBWD3-202ENST00000377342 IGKV2D-30A0A075B6S6 120 aa10.94□□□□□ -0.66
CBWD3-202ENST00000377342 IGKV2-30P06310 120 aa10.94□□□□□ -0.66
CBWD3-202ENST00000377342 H0Y9P7 68 aa10.93□□□□□ -0.66
CBWD3-202ENST00000377342 HRES1P13985 223 aa10.92□□□□□ -0.66
CBWD3-202ENST00000377342 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
CBWD3-202ENST00000377342 ATOX1O00244 68 aa10.92□□□□□ -0.66
CBWD3-202ENST00000377342 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
CBWD3-202ENST00000377342 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
CBWD3-202ENST00000377342 KRTAP19-2Q3LHN2 52 aa10.89□□□□□ -0.67
CBWD3-202ENST00000377342 TRAV7A0A075B6U4 112 aa10.88□□□□□ -0.67
CBWD3-202ENST00000377342 SMIM20Q8N5G0 67 aa10.88□□□□□ -0.67
CBWD3-202ENST00000377342 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
CBWD3-202ENST00000377342 C5orf47Q569G3 176 aa10.85□□□□□ -0.67
CBWD3-202ENST00000377342 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
CBWD3-202ENST00000377342 CYP4F30PQ9H0H9 118 aa10.82□□□□□ -0.68
CBWD3-202ENST00000377342 MP68P56378 58 aa10.82□□□□□ -0.68
CBWD3-202ENST00000377342 LINC00208Q96KT6 92 aa10.81□□□□□ -0.68
CBWD3-202ENST00000377342 C1orf64Q8NEQ6 169 aa10.8□□□□□ -0.68
CBWD3-202ENST00000377342 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
CBWD3-202ENST00000377342 LCE2CQ5TA81 110 aa10.79□□□□□ -0.68
CBWD3-202ENST00000377342 SERP2Q8N6R1 65 aa10.78□□□□□ -0.68
CBWD3-202ENST00000377342 H3BPC8 53 aa10.76□□□□□ -0.69
CBWD3-202ENST00000377342 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
CBWD3-202ENST00000377342 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
CBWD3-202ENST00000377342 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
CBWD3-202ENST00000377342 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
CBWD3-202ENST00000377342 COX6B2Q6YFQ2 88 aa10.69□□□□□ -0.7
CBWD3-202ENST00000377342 FAM236DA0A1B0GTK5 79 aa10.66□□□□□ -0.7
CBWD3-202ENST00000377342 FAM236CP0DP71 79 aa10.66□□□□□ -0.7
CBWD3-202ENST00000377342 FLGP20930 4061 aaPredicted RBP10.65□□□□□ -0.7
CBWD3-202ENST00000377342 COX7CP15954 63 aa10.64□□□□□ -0.71
CBWD3-202ENST00000377342 C20orf197Q8N268 126 aa10.63□□□□□ -0.71
CBWD3-202ENST00000377342 ANAPC13Q9BS18 74 aa10.63□□□□□ -0.71
CBWD3-202ENST00000377342 SNURFQ9Y675 71 aa10.63□□□□□ -0.71
CBWD3-202ENST00000377342 KRTAP3-1Q9BYR8 98 aa10.6□□□□□ -0.71
CBWD3-202ENST00000377342 MT1HP80294 61 aa10.58□□□□□ -0.72
CBWD3-202ENST00000377342 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-202ENST00000377342 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
CBWD3-202ENST00000377342 CYSTM1Q9H1C7 97 aa10.47□□□□□ -0.73
CBWD3-202ENST00000377342 CCDC179H3BU77 68 aa10.44□□□□□ -0.74
CBWD3-202ENST00000377342 A8MUN3 132 aa10.39□□□□□ -0.75
CBWD3-202ENST00000377342 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
CBWD3-202ENST00000377342 H7BZZ5 65 aa10.36□□□□□ -0.75
CBWD3-202ENST00000377342 M0R2T5 61 aa10.34□□□□□ -0.75
CBWD3-202ENST00000377342 SPANXA2-OT1Q8N9U9 137 aa10.34□□□□□ -0.75
CBWD3-202ENST00000377342 NDUFC1O43677 76 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 262.5 ms