RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 R4GN34 69 aa7.49□□□□□ -1.21
CACNA1F-202ENST00000376251 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.21
CACNA1F-202ENST00000376251 KRTAP13-1Q8IUC0 172 aa7.46□□□□□ -1.22
CACNA1F-202ENST00000376251 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
CACNA1F-202ENST00000376251 ASB16-AS1Q495Z4 193 aa7.44□□□□□ -1.22
CACNA1F-202ENST00000376251 Q75L30 129 aa7.44□□□□□ -1.22
CACNA1F-202ENST00000376251 ASH1LQ9NR48 2969 aaKnown RBP7.43□□□□□ -1.22
CACNA1F-202ENST00000376251 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
CACNA1F-202ENST00000376251 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
CACNA1F-202ENST00000376251 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
CACNA1F-202ENST00000376251 NF1P21359 2839 aa7.37□□□□□ -1.23
CACNA1F-202ENST00000376251 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
CACNA1F-202ENST00000376251 Q5XG85 94 aa7.35□□□□□ -1.23
CACNA1F-202ENST00000376251 M0QZ58 72 aa7.35□□□□□ -1.23
CACNA1F-202ENST00000376251 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
CACNA1F-202ENST00000376251 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
CACNA1F-202ENST00000376251 RELNP78509 3460 aa7.34□□□□□ -1.23
CACNA1F-202ENST00000376251 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
CACNA1F-202ENST00000376251 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
CACNA1F-202ENST00000376251 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
CACNA1F-202ENST00000376251 FBN2P35556 2912 aa7.31□□□□□ -1.24
CACNA1F-202ENST00000376251 A0A0A0MQY5 61 aa7.3□□□□□ -1.24
CACNA1F-202ENST00000376251 MXRA5Q9NR99 2828 aa7.27□□□□□ -1.24
CACNA1F-202ENST00000376251 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
CACNA1F-202ENST00000376251 NBPF19A0A087WUL8 3843 aa7.26□□□□□ -1.25
CACNA1F-202ENST00000376251 LAMA5O15230 3695 aa7.25□□□□□ -1.25
CACNA1F-202ENST00000376251 PDZD2O15018 2839 aa7.25□□□□□ -1.25
CACNA1F-202ENST00000376251 ASPMQ8IZT6 3477 aa7.25□□□□□ -1.25
CACNA1F-202ENST00000376251 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
CACNA1F-202ENST00000376251 TENM2Q9NT68 2774 aa7.23□□□□□ -1.25
CACNA1F-202ENST00000376251 Q5VV11 94 aa7.23□□□□□ -1.25
CACNA1F-202ENST00000376251 KRTAP1-4P0C5Y4 121 aa7.23□□□□□ -1.25
CACNA1F-202ENST00000376251 DCHS1Q96JQ0 3298 aa7.22□□□□□ -1.25
CACNA1F-202ENST00000376251 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
CACNA1F-202ENST00000376251 DMDP11532 3685 aa7.2□□□□□ -1.26
CACNA1F-202ENST00000376251 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
CACNA1F-202ENST00000376251 WDFY3Q8IZQ1 3526 aa7.18□□□□□ -1.26
CACNA1F-202ENST00000376251 TENM1Q9UKZ4 2725 aa7.16□□□□□ -1.26
CACNA1F-202ENST00000376251 MUC3AQ02505 3323 aa7.15□□□□□ -1.26
CACNA1F-202ENST00000376251 CELSR1Q9NYQ6 3014 aa7.15□□□□□ -1.26
CACNA1F-202ENST00000376251 A8MUU9 505 aa7.14□□□□□ -1.27
CACNA1F-202ENST00000376251 ROMO1P60602 79 aa7.13□□□□□ -1.27
CACNA1F-202ENST00000376251 XP32Q5T750 250 aa7.13□□□□□ -1.27
CACNA1F-202ENST00000376251 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CACNA1F-202ENST00000376251 OTOGQ6ZRI0 2925 aa7.1□□□□□ -1.27
CACNA1F-202ENST00000376251 TENM3Q9P273 2699 aa7.09□□□□□ -1.27
CACNA1F-202ENST00000376251 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
CACNA1F-202ENST00000376251 ZFHX4Q86UP3 3567 aa7.03□□□□□ -1.28
CACNA1F-202ENST00000376251 ZFHX3Q15911 3703 aa7.02□□□□□ -1.29
CACNA1F-202ENST00000376251 PKD1L1Q8TDX9 2849 aa7□□□□□ -1.29
CACNA1F-202ENST00000376251 ANK3Q12955 4377 aaKnown RBP6.98□□□□□ -1.29
CACNA1F-202ENST00000376251 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
CACNA1F-202ENST00000376251 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
CACNA1F-202ENST00000376251 SMG1Q96Q15 3661 aaKnown RBP6.92□□□□□ -1.3
CACNA1F-202ENST00000376251 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.3
CACNA1F-202ENST00000376251 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
CACNA1F-202ENST00000376251 A8MU10 97 aa6.87□□□□□ -1.31
CACNA1F-202ENST00000376251 VWFP04275 2813 aa6.84□□□□□ -1.31
CACNA1F-202ENST00000376251 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
CACNA1F-202ENST00000376251 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
CACNA1F-202ENST00000376251 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
CACNA1F-202ENST00000376251 TGP01266 2768 aa6.8□□□□□ -1.32
CACNA1F-202ENST00000376251 A6NN06 94 aa6.78□□□□□ -1.32
CACNA1F-202ENST00000376251 CSMD2Q7Z408 3487 aa6.77□□□□□ -1.33
CACNA1F-202ENST00000376251 SPENQ96T58 3664 aaKnown RBP6.77□□□□□ -1.33
CACNA1F-202ENST00000376251 TNP1P09430 55 aa6.73□□□□□ -1.33
CACNA1F-202ENST00000376251 BSNQ9UPA5 3926 aa6.72□□□□□ -1.33
CACNA1F-202ENST00000376251 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CACNA1F-202ENST00000376251 TRRAPQ9Y4A5 3859 aa6.63□□□□□ -1.35
CACNA1F-202ENST00000376251 NDUFAF8A1L188 74 aa6.63□□□□□ -1.35
CACNA1F-202ENST00000376251 SVEP1Q4LDE5 3571 aa6.62□□□□□ -1.35
CACNA1F-202ENST00000376251 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
CACNA1F-202ENST00000376251 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
CACNA1F-202ENST00000376251 P0C880 135 aa6.49□□□□□ -1.37
CACNA1F-202ENST00000376251 FBN3Q75N90 2809 aa6.49□□□□□ -1.37
CACNA1F-202ENST00000376251 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
CACNA1F-202ENST00000376251 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
CACNA1F-202ENST00000376251 ALMS1Q8TCU4 4167 aa6.41□□□□□ -1.38
CACNA1F-202ENST00000376251 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
CACNA1F-202ENST00000376251 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CACNA1F-202ENST00000376251 H0YAA0 97 aa6.4□□□□□ -1.38
CACNA1F-202ENST00000376251 AKAP9Q99996 3911 aa6.35□□□□□ -1.39
CACNA1F-202ENST00000376251 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
CACNA1F-202ENST00000376251 CUBNO60494 3623 aa6.34□□□□□ -1.39
CACNA1F-202ENST00000376251 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.4
CACNA1F-202ENST00000376251 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
CACNA1F-202ENST00000376251 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
CACNA1F-202ENST00000376251 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
CACNA1F-202ENST00000376251 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
CACNA1F-202ENST00000376251 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
CACNA1F-202ENST00000376251 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
CACNA1F-202ENST00000376251 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
CACNA1F-202ENST00000376251 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
CACNA1F-202ENST00000376251 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
CACNA1F-202ENST00000376251 DNAH5Q8TE73 4624 aa6□□□□□ -1.45
CACNA1F-202ENST00000376251 DNAH1Q9P2D7 4330 aa5.98□□□□□ -1.45
CACNA1F-202ENST00000376251 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
CACNA1F-202ENST00000376251 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
CACNA1F-202ENST00000376251 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
CACNA1F-202ENST00000376251 CSMD3Q7Z407 3707 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms