RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CDIP1Q9H305 208 aa12.75□□□□□ -0.37
HLA-C-202ENST00000376237 A0A1B0GVX0 72 aa12.72□□□□□ -0.37
HLA-C-202ENST00000376237 IGKV3D-7A0A0C4DH55 119 aa12.72□□□□□ -0.37
HLA-C-202ENST00000376237 PRR15Q8IV56 129 aa12.71□□□□□ -0.38
HLA-C-202ENST00000376237 IGHV6-1A0A0B4J1U7 121 aa12.68□□□□□ -0.38
HLA-C-202ENST00000376237 K7EQZ3 153 aa12.68□□□□□ -0.38
HLA-C-202ENST00000376237 TPRXLQ17RH7 258 aa12.68□□□□□ -0.38
HLA-C-202ENST00000376237 C8orf87E5RJ46 101 aa12.67□□□□□ -0.38
HLA-C-202ENST00000376237 KRTAP13-3Q3SY46 172 aa12.66□□□□□ -0.38
HLA-C-202ENST00000376237 LINC00313P59037 77 aa12.65□□□□□ -0.38
HLA-C-202ENST00000376237 Q8N9L7 120 aa12.64□□□□□ -0.39
HLA-C-202ENST00000376237 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
HLA-C-202ENST00000376237 C8orf17Q9NRJ1 99 aa12.6□□□□□ -0.39
HLA-C-202ENST00000376237 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
HLA-C-202ENST00000376237 HIST1H4AP62805 103 aaKnown RBP12.55□□□□□ -0.4
HLA-C-202ENST00000376237 MMP24-AS1A0A0U1RRL7 71 aa12.54□□□□□ -0.4
HLA-C-202ENST00000376237 IMUPQ9GZP8 106 aa12.52□□□□□ -0.41
HLA-C-202ENST00000376237 hDV103S1A0JD37 113 aa12.5□□□□□ -0.41
HLA-C-202ENST00000376237 HCG22E2RYF7 251 aa12.5□□□□□ -0.41
HLA-C-202ENST00000376237 MT-ATP8P03928 68 aa12.5□□□□□ -0.41
HLA-C-202ENST00000376237 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
HLA-C-202ENST00000376237 XP32Q5T750 250 aa12.48□□□□□ -0.41
HLA-C-202ENST00000376237 CASC2Q6XLA1 102 aa12.47□□□□□ -0.41
HLA-C-202ENST00000376237 TMEM254Q8TBM7 123 aa12.47□□□□□ -0.41
HLA-C-202ENST00000376237 WFDC13Q8IUB5 93 aa12.45□□□□□ -0.42
HLA-C-202ENST00000376237 MRPL34Q9BQ48 92 aaKnown RBP12.45□□□□□ -0.42
HLA-C-202ENST00000376237 C20orf166-AS1Q96NR2 134 aa12.43□□□□□ -0.42
HLA-C-202ENST00000376237 A0A087WVE0 104 aa12.42□□□□□ -0.42
HLA-C-202ENST00000376237 A8MUU9 505 aa12.41□□□□□ -0.42
HLA-C-202ENST00000376237 Q75L30 129 aa12.41□□□□□ -0.42
HLA-C-202ENST00000376237 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
HLA-C-202ENST00000376237 HMCN2Q8NDA2 5059 aa12.41□□□□□ -0.42
HLA-C-202ENST00000376237 RPL37P61927 97 aaKnown RBP12.37□□□□□ -0.43
HLA-C-202ENST00000376237 LPAP08519 4548 aa12.36□□□□□ -0.43
HLA-C-202ENST00000376237 NDUFS5O43920 106 aa12.32□□□□□ -0.44
HLA-C-202ENST00000376237 SEC61BP60468 96 aaKnown RBP12.27□□□□□ -0.44
HLA-C-202ENST00000376237 ATP11AUNQ6ZP68 121 aa12.27□□□□□ -0.44
HLA-C-202ENST00000376237 TP53AIP1Q9HCN2 124 aa12.26□□□□□ -0.45
HLA-C-202ENST00000376237 LRP2P98164 4655 aa12.25□□□□□ -0.45
HLA-C-202ENST00000376237 SCGB1A1P11684 91 aa12.22□□□□□ -0.45
HLA-C-202ENST00000376237 FAM236AA0A1B0GUQ0 79 aa12.21□□□□□ -0.45
HLA-C-202ENST00000376237 FAM236BA0A1B0GV22 79 aa12.21□□□□□ -0.45
HLA-C-202ENST00000376237 ZCCHC13Q8WW36 166 aaKnown RBP12.21□□□□□ -0.46
HLA-C-202ENST00000376237 UBR4Q5T4S7 5183 aa12.19□□□□□ -0.46
HLA-C-202ENST00000376237 PCOTHQ58A44 107 aa12.18□□□□□ -0.46
HLA-C-202ENST00000376237 UQCRQO14949 82 aa12.13□□□□□ -0.47
HLA-C-202ENST00000376237 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
HLA-C-202ENST00000376237 SMIM20Q8N5G0 67 aa12.11□□□□□ -0.47
HLA-C-202ENST00000376237 ATOX1O00244 68 aa12.1□□□□□ -0.47
HLA-C-202ENST00000376237 Q5W150 140 aa12.1□□□□□ -0.47
HLA-C-202ENST00000376237 TRAV22A0A0B4J277 110 aa12.05□□□□□ -0.48
HLA-C-202ENST00000376237 TRAV7A0A075B6U4 112 aa12.01□□□□□ -0.49
HLA-C-202ENST00000376237 C5orf47Q569G3 176 aa12.01□□□□□ -0.49
HLA-C-202ENST00000376237 MUC17Q685J3 4493 aa11.99□□□□□ -0.49
HLA-C-202ENST00000376237 H0Y9P7 68 aa11.97□□□□□ -0.49
HLA-C-202ENST00000376237 MP68P56378 58 aa11.96□□□□□ -0.5
HLA-C-202ENST00000376237 SPINK7P58062 85 aa11.95□□□□□ -0.5
HLA-C-202ENST00000376237 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
HLA-C-202ENST00000376237 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
HLA-C-202ENST00000376237 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
HLA-C-202ENST00000376237 LOC101927531A0A1B0GV80 90 aa11.91□□□□□ -0.5
HLA-C-202ENST00000376237 H3BPC8 53 aa11.91□□□□□ -0.5
HLA-C-202ENST00000376237 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
HLA-C-202ENST00000376237 KRTAP4-1Q9BYQ7 146 aa11.91□□□□□ -0.5
HLA-C-202ENST00000376237 C1orf64Q8NEQ6 169 aa11.86□□□□□ -0.51
HLA-C-202ENST00000376237 LINC00208Q96KT6 92 aa11.86□□□□□ -0.51
HLA-C-202ENST00000376237 RNF213Q63HN8 5207 aa11.82□□□□□ -0.52
HLA-C-202ENST00000376237 CYP4F30PQ9H0H9 118 aa11.82□□□□□ -0.52
HLA-C-202ENST00000376237 ANAPC13Q9BS18 74 aa11.81□□□□□ -0.52
HLA-C-202ENST00000376237 COX7CP15954 63 aa11.79□□□□□ -0.52
HLA-C-202ENST00000376237 HRES1P13985 223 aa11.76□□□□□ -0.53
HLA-C-202ENST00000376237 A0A0U1RQV1 116 aa11.74□□□□□ -0.53
HLA-C-202ENST00000376237 C20orf197Q8N268 126 aa11.71□□□□□ -0.53
HLA-C-202ENST00000376237 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
HLA-C-202ENST00000376237 RBM12B-AS1Q9P1G2 102 aa11.7□□□□□ -0.54
HLA-C-202ENST00000376237 MUC2Q02817 5179 aa11.69□□□□□ -0.54
HLA-C-202ENST00000376237 KLKP1Q107X0 134 aa11.65□□□□□ -0.54
HLA-C-202ENST00000376237 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
HLA-C-202ENST00000376237 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
HLA-C-202ENST00000376237 COX6B2Q6YFQ2 88 aa11.58□□□□□ -0.56
HLA-C-202ENST00000376237 FAM236DA0A1B0GTK5 79 aa11.57□□□□□ -0.56
HLA-C-202ENST00000376237 FAM236CP0DP71 79 aa11.57□□□□□ -0.56
HLA-C-202ENST00000376237 KRTAP19-2Q3LHN2 52 aa11.55□□□□□ -0.56
HLA-C-202ENST00000376237 NDUFC1O43677 76 aa11.52□□□□□ -0.57
HLA-C-202ENST00000376237 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
HLA-C-202ENST00000376237 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
HLA-C-202ENST00000376237 A8MUN3 132 aa11.44□□□□□ -0.58
HLA-C-202ENST00000376237 H1FX-AS1Q4G0G2 97 aa11.44□□□□□ -0.58
HLA-C-202ENST00000376237 KRTAP3-1Q9BYR8 98 aa11.44□□□□□ -0.58
HLA-C-202ENST00000376237 SPANXA2-OT1Q8N9U9 137 aa11.43□□□□□ -0.58
HLA-C-202ENST00000376237 H7BZZ5 65 aa11.4□□□□□ -0.58
HLA-C-202ENST00000376237 CYSTM1Q9H1C7 97 aa11.4□□□□□ -0.58
HLA-C-202ENST00000376237 DMAC1Q96GE9 116 aa11.36□□□□□ -0.59
HLA-C-202ENST00000376237 PCP4P48539 62 aa11.34□□□□□ -0.59
HLA-C-202ENST00000376237 FAT4Q6V0I7 4981 aa11.28□□□□□ -0.6
HLA-C-202ENST00000376237 ACYP2P14621 99 aa11.28□□□□□ -0.6
HLA-C-202ENST00000376237 MT1HP80294 61 aa11.27□□□□□ -0.61
HLA-C-202ENST00000376237 S4R3F8 94 aa11.23□□□□□ -0.61
HLA-C-202ENST00000376237 FLGP20930 4061 aaPredicted RBP11.19□□□□□ -0.62
HLA-C-202ENST00000376237 TMEM258P61165 79 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms