RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 LINC00313P59037 77 aa8.01□□□□□ -1.13
SDHB-201ENST00000375499 DSCR8Q96T75 97 aa8□□□□□ -1.13
SDHB-201ENST00000375499 ATXN8Q156A1 80 aa7.99□□□□□ -1.13
SDHB-201ENST00000375499 IGHV6-1A0A0B4J1U7 121 aa7.98□□□□□ -1.13
SDHB-201ENST00000375499 C9JAW5 83 aa7.96□□□□□ -1.14
SDHB-201ENST00000375499 Q6ZQT0 140 aa7.95□□□□□ -1.14
SDHB-201ENST00000375499 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
SDHB-201ENST00000375499 BATFQ16520 125 aa7.94□□□□□ -1.14
SDHB-201ENST00000375499 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
SDHB-201ENST00000375499 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
SDHB-201ENST00000375499 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
SDHB-201ENST00000375499 C14orf132Q9NPU4 83 aa7.91□□□□□ -1.14
SDHB-201ENST00000375499 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
SDHB-201ENST00000375499 JMJD7-PLA2G4BH0Y9G9 81 aa7.89□□□□□ -1.15
SDHB-201ENST00000375499 HRES1P13985 223 aa7.88□□□□□ -1.15
SDHB-201ENST00000375499 LYRM7Q5U5X0 104 aa7.87□□□□□ -1.15
SDHB-201ENST00000375499 TRBV20-1A0A075B6N2 111 aa7.86□□□□□ -1.15
SDHB-201ENST00000375499 J3KT08 172 aa7.86□□□□□ -1.15
SDHB-201ENST00000375499 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
SDHB-201ENST00000375499 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
SDHB-201ENST00000375499 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
SDHB-201ENST00000375499 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
SDHB-201ENST00000375499 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
SDHB-201ENST00000375499 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
SDHB-201ENST00000375499 A8MWP4 228 aa7.82□□□□□ -1.16
SDHB-201ENST00000375499 PDE6GP18545 87 aa7.82□□□□□ -1.16
SDHB-201ENST00000375499 A0A1B0GW54 56 aa7.81□□□□□ -1.16
SDHB-201ENST00000375499 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
SDHB-201ENST00000375499 C8orf17Q9NRJ1 99 aa7.81□□□□□ -1.16
SDHB-201ENST00000375499 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
SDHB-201ENST00000375499 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
SDHB-201ENST00000375499 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
SDHB-201ENST00000375499 NDUFB1O75438 58 aa7.79□□□□□ -1.16
SDHB-201ENST00000375499 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
SDHB-201ENST00000375499 H3BT86 120 aa7.78□□□□□ -1.16
SDHB-201ENST00000375499 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
SDHB-201ENST00000375499 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
SDHB-201ENST00000375499 NREPQ16612 68 aa7.75□□□□□ -1.17
SDHB-201ENST00000375499 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
SDHB-201ENST00000375499 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
SDHB-201ENST00000375499 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
SDHB-201ENST00000375499 SPINK7P58062 85 aa7.73□□□□□ -1.17
SDHB-201ENST00000375499 Q6ZVQ6 151 aa7.73□□□□□ -1.17
SDHB-201ENST00000375499 USH2AO75445 5202 aa7.73□□□□□ -1.17
SDHB-201ENST00000375499 K7EQZ3 153 aa7.71□□□□□ -1.18
SDHB-201ENST00000375499 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
SDHB-201ENST00000375499 MT2AP02795 61 aa7.68□□□□□ -1.18
SDHB-201ENST00000375499 TMEM254Q8TBM7 123 aa7.67□□□□□ -1.18
SDHB-201ENST00000375499 MRPL34Q9BQ48 92 aaKnown RBP7.66□□□□□ -1.18
SDHB-201ENST00000375499 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
SDHB-201ENST00000375499 PCP4L1A6NKN8 68 aa7.64□□□□□ -1.19
SDHB-201ENST00000375499 MT1FP04733 61 aa7.64□□□□□ -1.19
SDHB-201ENST00000375499 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
SDHB-201ENST00000375499 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
SDHB-201ENST00000375499 hDV103S1A0JD37 113 aa7.63□□□□□ -1.19
SDHB-201ENST00000375499 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
SDHB-201ENST00000375499 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
SDHB-201ENST00000375499 Q8N9L7 120 aa7.62□□□□□ -1.19
SDHB-201ENST00000375499 BPY2O14599 106 aa7.61□□□□□ -1.19
SDHB-201ENST00000375499 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
SDHB-201ENST00000375499 SYNE2Q8WXH0 6885 aaKnown RBP7.6□□□□□ -1.19
SDHB-201ENST00000375499 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
SDHB-201ENST00000375499 K7EP34 96 aa7.58□□□□□ -1.2
SDHB-201ENST00000375499 NDUFS5O43920 106 aa7.58□□□□□ -1.2
SDHB-201ENST00000375499 Q5W150 140 aa7.57□□□□□ -1.2
SDHB-201ENST00000375499 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
SDHB-201ENST00000375499 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
SDHB-201ENST00000375499 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
SDHB-201ENST00000375499 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
SDHB-201ENST00000375499 HCG22E2RYF7 251 aa7.5□□□□□ -1.21
SDHB-201ENST00000375499 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
SDHB-201ENST00000375499 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
SDHB-201ENST00000375499 UBL5Q9BZL1 73 aa7.46□□□□□ -1.22
SDHB-201ENST00000375499 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
SDHB-201ENST00000375499 H1FX-AS1Q4G0G2 97 aa7.43□□□□□ -1.22
SDHB-201ENST00000375499 GTF2H5Q6ZYL4 71 aa7.42□□□□□ -1.22
SDHB-201ENST00000375499 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
SDHB-201ENST00000375499 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
SDHB-201ENST00000375499 CXCL6P80162 114 aa7.39□□□□□ -1.23
SDHB-201ENST00000375499 F8W1H4 67 aa7.38□□□□□ -1.23
SDHB-201ENST00000375499 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
SDHB-201ENST00000375499 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
SDHB-201ENST00000375499 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
SDHB-201ENST00000375499 TP53AIP1Q9HCN2 124 aa7.23□□□□□ -1.25
SDHB-201ENST00000375499 A0A1B0GV90 55 aa7.22□□□□□ -1.25
SDHB-201ENST00000375499 C5orf47Q569G3 176 aa7.22□□□□□ -1.25
SDHB-201ENST00000375499 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
SDHB-201ENST00000375499 S4R3F8 94 aa7.19□□□□□ -1.26
SDHB-201ENST00000375499 NEBP20929 6669 aa7.18□□□□□ -1.26
SDHB-201ENST00000375499 LCA10Q71F78 164 aa7.18□□□□□ -1.26
SDHB-201ENST00000375499 FAM240AA0A1B0GVK7 77 aa7.17□□□□□ -1.26
SDHB-201ENST00000375499 ACYP1P07311 99 aa7.16□□□□□ -1.26
SDHB-201ENST00000375499 CYP4F30PQ9H0H9 118 aa7.16□□□□□ -1.26
SDHB-201ENST00000375499 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
SDHB-201ENST00000375499 ATP5EP2Q5VTU8 51 aa7.12□□□□□ -1.27
SDHB-201ENST00000375499 A0A087WVE0 104 aa7.11□□□□□ -1.27
SDHB-201ENST00000375499 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
SDHB-201ENST00000375499 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.27
SDHB-201ENST00000375499 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.27
SDHB-201ENST00000375499 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms