RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
TGFBR1-201ENST00000374990 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
TGFBR1-201ENST00000374990 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
TGFBR1-201ENST00000374990 S4R3F8 94 aa11.31□□□□□ -0.6
TGFBR1-201ENST00000374990 USP34Q70CQ2 3546 aa11.29□□□□□ -0.6
TGFBR1-201ENST00000374990 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
TGFBR1-201ENST00000374990 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.61
TGFBR1-201ENST00000374990 Q5VSD8 79 aa11.26□□□□□ -0.61
TGFBR1-201ENST00000374990 SPTBN5Q9NRC6 3674 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-201ENST00000374990 PRAC1Q96KF2 57 aa11.24□□□□□ -0.61
TGFBR1-201ENST00000374990 CAMK2N1Q7Z7J9 78 aa11.19□□□□□ -0.62
TGFBR1-201ENST00000374990 SEC61BP60468 96 aaKnown RBP11.18□□□□□ -0.62
TGFBR1-201ENST00000374990 RPL37P61927 97 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-201ENST00000374990 TENM3Q9P273 2699 aa11.16□□□□□ -0.62
TGFBR1-201ENST00000374990 H1FX-AS1Q4G0G2 97 aa11.14□□□□□ -0.63
TGFBR1-201ENST00000374990 KRTAP13-2Q52LG2 175 aa11.14□□□□□ -0.63
TGFBR1-201ENST00000374990 SPATA8Q6RVD6 105 aa11.12□□□□□ -0.63
TGFBR1-201ENST00000374990 R4GN34 69 aa11.1□□□□□ -0.63
TGFBR1-201ENST00000374990 LUZP6Q538Z0 58 aa11.06□□□□□ -0.64
TGFBR1-201ENST00000374990 MYO15AQ9UKN7 3530 aa11.02□□□□□ -0.65
TGFBR1-201ENST00000374990 ROMO1P60602 79 aa11□□□□□ -0.65
TGFBR1-201ENST00000374990 TENM1Q9UKZ4 2725 aa10.96□□□□□ -0.65
TGFBR1-201ENST00000374990 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
TGFBR1-201ENST00000374990 M0R2T5 61 aa10.93□□□□□ -0.66
TGFBR1-201ENST00000374990 KRTAP21-3Q3LHN1 58 aa10.92□□□□□ -0.66
TGFBR1-201ENST00000374990 A6NN06 94 aa10.91□□□□□ -0.66
TGFBR1-201ENST00000374990 M0QZ58 72 aa10.87□□□□□ -0.67
TGFBR1-201ENST00000374990 DCHS1Q96JQ0 3298 aa10.83□□□□□ -0.68
TGFBR1-201ENST00000374990 ADM2Q7Z4H4 148 aa10.83□□□□□ -0.68
TGFBR1-201ENST00000374990 A8MUU9 505 aa10.81□□□□□ -0.68
TGFBR1-201ENST00000374990 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.68
TGFBR1-201ENST00000374990 PDZD2O15018 2839 aa10.76□□□□□ -0.69
TGFBR1-201ENST00000374990 RELNP78509 3460 aa10.74□□□□□ -0.69
TGFBR1-201ENST00000374990 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
TGFBR1-201ENST00000374990 A8MU10 97 aa10.73□□□□□ -0.69
TGFBR1-201ENST00000374990 PKD1L1Q8TDX9 2849 aa10.68□□□□□ -0.7
TGFBR1-201ENST00000374990 TGP01266 2768 aa10.66□□□□□ -0.7
TGFBR1-201ENST00000374990 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
TGFBR1-201ENST00000374990 KRTAP25-1Q3LHN0 102 aa10.61□□□□□ -0.71
TGFBR1-201ENST00000374990 H3BS24 57 aa10.6□□□□□ -0.71
TGFBR1-201ENST00000374990 VWFP04275 2813 aa10.58□□□□□ -0.72
TGFBR1-201ENST00000374990 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
TGFBR1-201ENST00000374990 WDFY3Q8IZQ1 3526 aa10.53□□□□□ -0.72
TGFBR1-201ENST00000374990 A0A0A0MQY5 61 aa10.49□□□□□ -0.73
TGFBR1-201ENST00000374990 KRTAP16-1A8MUX0 517 aa10.49□□□□□ -0.73
TGFBR1-201ENST00000374990 OTOGQ6ZRI0 2925 aa10.46□□□□□ -0.73
TGFBR1-201ENST00000374990 PLAC4Q8WY50 150 aa10.46□□□□□ -0.73
TGFBR1-201ENST00000374990 LAMA5O15230 3695 aa10.41□□□□□ -0.74
TGFBR1-201ENST00000374990 XP32Q5T750 250 aa10.38□□□□□ -0.75
TGFBR1-201ENST00000374990 MUC3AQ02505 3323 aa10.36□□□□□ -0.75
TGFBR1-201ENST00000374990 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
TGFBR1-201ENST00000374990 ASPMQ8IZT6 3477 aa10.28□□□□□ -0.76
TGFBR1-201ENST00000374990 ZFHX4Q86UP3 3567 aa10.28□□□□□ -0.76
TGFBR1-201ENST00000374990 H0YAA0 97 aa10.23□□□□□ -0.77
TGFBR1-201ENST00000374990 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
TGFBR1-201ENST00000374990 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
TGFBR1-201ENST00000374990 TNP1P09430 55 aa10.13□□□□□ -0.79
TGFBR1-201ENST00000374990 FBN3Q75N90 2809 aa10.09□□□□□ -0.79
TGFBR1-201ENST00000374990 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
TGFBR1-201ENST00000374990 DMDP11532 3685 aa10.07□□□□□ -0.8
TGFBR1-201ENST00000374990 CSMD1Q96PZ7 3565 aa10.04□□□□□ -0.8
TGFBR1-201ENST00000374990 PP632Q6XCG6 107 aa10.04□□□□□ -0.8
TGFBR1-201ENST00000374990 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
TGFBR1-201ENST00000374990 NDUFAF8A1L188 74 aa10.03□□□□□ -0.8
TGFBR1-201ENST00000374990 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
TGFBR1-201ENST00000374990 P0C880 135 aa9.96□□□□□ -0.82
TGFBR1-201ENST00000374990 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
TGFBR1-201ENST00000374990 NBPF19A0A087WUL8 3843 aa9.93□□□□□ -0.82
TGFBR1-201ENST00000374990 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
TGFBR1-201ENST00000374990 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.83
TGFBR1-201ENST00000374990 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
TGFBR1-201ENST00000374990 SVEP1Q4LDE5 3571 aa9.79□□□□□ -0.84
TGFBR1-201ENST00000374990 CUBNO60494 3623 aa9.71□□□□□ -0.85
TGFBR1-201ENST00000374990 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.85
TGFBR1-201ENST00000374990 CSMD2Q7Z408 3487 aa9.71□□□□□ -0.86
TGFBR1-201ENST00000374990 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
TGFBR1-201ENST00000374990 TRRAPQ9Y4A5 3859 aa9.64□□□□□ -0.87
TGFBR1-201ENST00000374990 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
TGFBR1-201ENST00000374990 KRTAP10-10P60014 251 aa9.57□□□□□ -0.88
TGFBR1-201ENST00000374990 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
TGFBR1-201ENST00000374990 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
TGFBR1-201ENST00000374990 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
TGFBR1-201ENST00000374990 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
TGFBR1-201ENST00000374990 BSNQ9UPA5 3926 aa9.38□□□□□ -0.91
TGFBR1-201ENST00000374990 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
TGFBR1-201ENST00000374990 MT1HL1P0DM35 61 aa9.27□□□□□ -0.93
TGFBR1-201ENST00000374990 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
TGFBR1-201ENST00000374990 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
TGFBR1-201ENST00000374990 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
TGFBR1-201ENST00000374990 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
TGFBR1-201ENST00000374990 VPS13CQ709C8 3753 aa9□□□□□ -0.97
TGFBR1-201ENST00000374990 ZNF469Q96JG9 3925 aaPredicted RBP8.77□□□□□ -1.01
TGFBR1-201ENST00000374990 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
TGFBR1-201ENST00000374990 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
TGFBR1-201ENST00000374990 DNAH5Q8TE73 4624 aa8.7□□□□□ -1.02
TGFBR1-201ENST00000374990 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
TGFBR1-201ENST00000374990 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
TGFBR1-201ENST00000374990 KRTAP23-1A1A580 65 aa8.57□□□□□ -1.04
TGFBR1-201ENST00000374990 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-201ENST00000374990 DNAH11Q96DT5 4516 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms