RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 A6NN06 94 aa6.14□□□□□ -1.43
COL5A2-201ENST00000374866 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
COL5A2-201ENST00000374866 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
COL5A2-201ENST00000374866 NBPF19A0A087WUL8 3843 aa6.09□□□□□ -1.43
COL5A2-201ENST00000374866 STAB1Q9NY15 2570 aa6.08□□□□□ -1.44
COL5A2-201ENST00000374866 COL6A5A8TX70 2615 aa6.07□□□□□ -1.44
COL5A2-201ENST00000374866 GCN1Q92616 2671 aaKnown RBP6.07□□□□□ -1.44
COL5A2-201ENST00000374866 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
COL5A2-201ENST00000374866 WDFY3Q8IZQ1 3526 aa6.05□□□□□ -1.44
COL5A2-201ENST00000374866 KMT2BQ9UMN6 2715 aaPredicted RBP6.05□□□□□ -1.44
COL5A2-201ENST00000374866 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
COL5A2-201ENST00000374866 NBEAL2Q6ZNJ1 2754 aa6.04□□□□□ -1.44
COL5A2-201ENST00000374866 ATMQ13315 3056 aa6.04□□□□□ -1.44
COL5A2-201ENST00000374866 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
COL5A2-201ENST00000374866 MAP1AP78559 2803 aaPredicted RBP6.03□□□□□ -1.44
COL5A2-201ENST00000374866 KALRNO60229 2985 aa6.03□□□□□ -1.44
COL5A2-201ENST00000374866 UTP20O75691 2785 aaKnown RBP6.02□□□□□ -1.44
COL5A2-201ENST00000374866 STAB2Q8WWQ8 2551 aa6.02□□□□□ -1.45
COL5A2-201ENST00000374866 UNC79Q9P2D8 2635 aa6□□□□□ -1.45
COL5A2-201ENST00000374866 P0C880 135 aa5.99□□□□□ -1.45
COL5A2-201ENST00000374866 XP32Q5T750 250 aa5.98□□□□□ -1.45
COL5A2-201ENST00000374866 LOC400499M0QZD8 3231 aa5.97□□□□□ -1.45
COL5A2-201ENST00000374866 KRTAP13-1Q8IUC0 172 aa5.96□□□□□ -1.45
COL5A2-201ENST00000374866 ADGRG4Q8IZF6 3080 aa5.95□□□□□ -1.46
COL5A2-201ENST00000374866 NBEAQ8NFP9 2946 aa5.95□□□□□ -1.46
COL5A2-201ENST00000374866 TACC2O95359 2948 aa5.93□□□□□ -1.46
COL5A2-201ENST00000374866 DMDP11532 3685 aa5.93□□□□□ -1.46
COL5A2-201ENST00000374866 LAMA5O15230 3695 aa5.89□□□□□ -1.47
COL5A2-201ENST00000374866 DCHS1Q96JQ0 3298 aa5.89□□□□□ -1.47
COL5A2-201ENST00000374866 APCP25054 2843 aa5.88□□□□□ -1.47
COL5A2-201ENST00000374866 H0YAA0 97 aa5.88□□□□□ -1.47
COL5A2-201ENST00000374866 RELNP78509 3460 aa5.88□□□□□ -1.47
COL5A2-201ENST00000374866 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
COL5A2-201ENST00000374866 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
COL5A2-201ENST00000374866 NOTCH1P46531 2555 aa5.86□□□□□ -1.47
COL5A2-201ENST00000374866 HIVEP1P15822 2718 aa5.86□□□□□ -1.47
COL5A2-201ENST00000374866 ITPR1Q14643 2758 aa5.83□□□□□ -1.48
COL5A2-201ENST00000374866 UBR5O95071 2799 aaPredicted RBP5.83□□□□□ -1.48
COL5A2-201ENST00000374866 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
COL5A2-201ENST00000374866 TENM4Q6N022 2769 aa5.79□□□□□ -1.48
COL5A2-201ENST00000374866 ZFHX4Q86UP3 3567 aa5.79□□□□□ -1.48
COL5A2-201ENST00000374866 ZZEF1O43149 2961 aa5.79□□□□□ -1.48
COL5A2-201ENST00000374866 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
COL5A2-201ENST00000374866 FLNCQ14315 2725 aa5.75□□□□□ -1.49
COL5A2-201ENST00000374866 NSD1Q96L73 2696 aaPredicted RBP5.75□□□□□ -1.49
COL5A2-201ENST00000374866 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
COL5A2-201ENST00000374866 CELSR2Q9HCU4 2923 aa5.7□□□□□ -1.5
COL5A2-201ENST00000374866 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
COL5A2-201ENST00000374866 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
COL5A2-201ENST00000374866 CSMD1Q96PZ7 3565 aa5.67□□□□□ -1.5
COL5A2-201ENST00000374866 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
COL5A2-201ENST00000374866 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
COL5A2-201ENST00000374866 ZFHX3Q15911 3703 aa5.63□□□□□ -1.51
COL5A2-201ENST00000374866 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
COL5A2-201ENST00000374866 CELSR1Q9NYQ6 3014 aa5.57□□□□□ -1.52
COL5A2-201ENST00000374866 SMG1Q96Q15 3661 aaKnown RBP5.56□□□□□ -1.52
COL5A2-201ENST00000374866 SPENQ96T58 3664 aaKnown RBP5.56□□□□□ -1.52
COL5A2-201ENST00000374866 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
COL5A2-201ENST00000374866 BSNQ9UPA5 3926 aa5.55□□□□□ -1.52
COL5A2-201ENST00000374866 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
COL5A2-201ENST00000374866 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
COL5A2-201ENST00000374866 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
COL5A2-201ENST00000374866 TENM2Q9NT68 2774 aa5.5□□□□□ -1.53
COL5A2-201ENST00000374866 NF1P21359 2839 aa5.5□□□□□ -1.53
COL5A2-201ENST00000374866 FBN2P35556 2912 aa5.49□□□□□ -1.53
COL5A2-201ENST00000374866 ANK3Q12955 4377 aaKnown RBP5.49□□□□□ -1.53
COL5A2-201ENST00000374866 CSMD2Q7Z408 3487 aa5.48□□□□□ -1.53
COL5A2-201ENST00000374866 SVEP1Q4LDE5 3571 aa5.44□□□□□ -1.54
COL5A2-201ENST00000374866 TENM1Q9UKZ4 2725 aa5.43□□□□□ -1.54
COL5A2-201ENST00000374866 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
COL5A2-201ENST00000374866 PDZD2O15018 2839 aa5.38□□□□□ -1.55
COL5A2-201ENST00000374866 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
COL5A2-201ENST00000374866 TGP01266 2768 aa5.32□□□□□ -1.56
COL5A2-201ENST00000374866 CUBNO60494 3623 aa5.29□□□□□ -1.56
COL5A2-201ENST00000374866 PKD1L1Q8TDX9 2849 aa5.28□□□□□ -1.56
COL5A2-201ENST00000374866 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
COL5A2-201ENST00000374866 TRRAPQ9Y4A5 3859 aa5.27□□□□□ -1.57
COL5A2-201ENST00000374866 VPS13CQ709C8 3753 aa5.26□□□□□ -1.57
COL5A2-201ENST00000374866 FBN1P35555 2871 aaKnown RBP5.24□□□□□ -1.57
COL5A2-201ENST00000374866 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.58
COL5A2-201ENST00000374866 VWFP04275 2813 aa5.21□□□□□ -1.58
COL5A2-201ENST00000374866 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
COL5A2-201ENST00000374866 AKAP9Q99996 3911 aa5.19□□□□□ -1.58
COL5A2-201ENST00000374866 HUWE1Q7Z6Z7 4374 aaKnown RBP5.19□□□□□ -1.58
COL5A2-201ENST00000374866 TENM3Q9P273 2699 aa5.19□□□□□ -1.58
COL5A2-201ENST00000374866 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.58
COL5A2-201ENST00000374866 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
COL5A2-201ENST00000374866 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
COL5A2-201ENST00000374866 ZNF469Q96JG9 3925 aaPredicted RBP5.11□□□□□ -1.59
COL5A2-201ENST00000374866 CSMD3Q7Z407 3707 aa5.03□□□□□ -1.6
COL5A2-201ENST00000374866 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
COL5A2-201ENST00000374866 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
COL5A2-201ENST00000374866 KRTAP10-5P60370 271 aa5□□□□□ -1.61
COL5A2-201ENST00000374866 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
COL5A2-201ENST00000374866 COL7A1Q02388 2944 aa4.95□□□□□ -1.62
COL5A2-201ENST00000374866 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
COL5A2-201ENST00000374866 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
COL5A2-201ENST00000374866 INE1O15225 51 aa4.88□□□□□ -1.63
COL5A2-201ENST00000374866 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
COL5A2-201ENST00000374866 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms