RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 H3BMG7 143 aa4.13□□□□□ -1.75
HLA-DOA-202ENST00000374813 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
HLA-DOA-202ENST00000374813 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
HLA-DOA-202ENST00000374813 LYRM7Q5U5X0 104 aa4.12□□□□□ -1.75
HLA-DOA-202ENST00000374813 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
HLA-DOA-202ENST00000374813 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
HLA-DOA-202ENST00000374813 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
HLA-DOA-202ENST00000374813 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
HLA-DOA-202ENST00000374813 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
HLA-DOA-202ENST00000374813 A0A1B0GVX0 72 aa4.1□□□□□ -1.75
HLA-DOA-202ENST00000374813 A0A1B0GV72 72 aa4.08□□□□□ -1.76
HLA-DOA-202ENST00000374813 IGKV3D-7A0A0C4DH55 119 aa4.06□□□□□ -1.76
HLA-DOA-202ENST00000374813 FABP2P12104 132 aa4.06□□□□□ -1.76
HLA-DOA-202ENST00000374813 COA6Q5JTJ3 125 aaKnown RBP4.06□□□□□ -1.76
HLA-DOA-202ENST00000374813 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
HLA-DOA-202ENST00000374813 SMCPP49901 116 aaPredicted RBP4.04□□□□□ -1.76
HLA-DOA-202ENST00000374813 C5orf47Q569G3 176 aa4.03□□□□□ -1.76
HLA-DOA-202ENST00000374813 H0YGX0 51 aa4.02□□□□□ -1.77
HLA-DOA-202ENST00000374813 HIST1H4GQ99525 98 aa4.02□□□□□ -1.77
HLA-DOA-202ENST00000374813 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
HLA-DOA-202ENST00000374813 J3KT08 172 aa4.01□□□□□ -1.77
HLA-DOA-202ENST00000374813 TRACP01848 142 aa4.01□□□□□ -1.77
HLA-DOA-202ENST00000374813 CCKP06307 115 aa4.01□□□□□ -1.77
HLA-DOA-202ENST00000374813 SNRPEP62304 92 aaKnown RBP4.01□□□□□ -1.77
HLA-DOA-202ENST00000374813 NDUFB1O75438 58 aa4□□□□□ -1.77
HLA-DOA-202ENST00000374813 KLKP1Q107X0 134 aa4□□□□□ -1.77
HLA-DOA-202ENST00000374813 CSAG1Q6PB30 78 aa4□□□□□ -1.77
HLA-DOA-202ENST00000374813 A0A0B4J2C4 111 aa3.97□□□□□ -1.77
HLA-DOA-202ENST00000374813 A0A1B0GX51 115 aa3.97□□□□□ -1.77
HLA-DOA-202ENST00000374813 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
HLA-DOA-202ENST00000374813 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
HLA-DOA-202ENST00000374813 C2orf91Q6ZV80 131 aa3.96□□□□□ -1.78
HLA-DOA-202ENST00000374813 PRR15Q8IV56 129 aa3.96□□□□□ -1.78
HLA-DOA-202ENST00000374813 TRIAP1O43715 76 aa3.95□□□□□ -1.78
HLA-DOA-202ENST00000374813 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
HLA-DOA-202ENST00000374813 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
HLA-DOA-202ENST00000374813 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
HLA-DOA-202ENST00000374813 H3BQ85 93 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 COX8AP10176 69 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 Q6ZVQ6 151 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 HIST1H2BLQ99880 126 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 ORMDL1Q9P0S3 153 aa3.94□□□□□ -1.78
HLA-DOA-202ENST00000374813 C21orf62-AS1Q17RA5 79 aa3.93□□□□□ -1.78
HLA-DOA-202ENST00000374813 IGKV2D-30A0A075B6S6 120 aa3.92□□□□□ -1.78
HLA-DOA-202ENST00000374813 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
HLA-DOA-202ENST00000374813 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
HLA-DOA-202ENST00000374813 HIST3H2BBQ8N257 126 aa3.92□□□□□ -1.78
HLA-DOA-202ENST00000374813 S4R3F8 94 aa3.92□□□□□ -1.78
HLA-DOA-202ENST00000374813 PRO1854Q9UHT4 67 aa3.91□□□□□ -1.78
HLA-DOA-202ENST00000374813 TMEM256-PLSCR3K7ERE1 68 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 DLEU1O43261 78 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 DNAL4O96015 105 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 CEND1Q8N111 149 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 C14orf144Q96I85 54 aa3.9□□□□□ -1.79
HLA-DOA-202ENST00000374813 FXYD2P54710 66 aa3.89□□□□□ -1.79
HLA-DOA-202ENST00000374813 MT1XP80297 61 aa3.89□□□□□ -1.79
HLA-DOA-202ENST00000374813 Q6ZQT0 140 aa3.89□□□□□ -1.79
HLA-DOA-202ENST00000374813 LCA10Q71F78 164 aa3.89□□□□□ -1.79
HLA-DOA-202ENST00000374813 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
HLA-DOA-202ENST00000374813 RBM3P98179 157 aaKnown RBP3.88□□□□□ -1.79
HLA-DOA-202ENST00000374813 UBE2V1Q13404 147 aa3.88□□□□□ -1.79
HLA-DOA-202ENST00000374813 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
HLA-DOA-202ENST00000374813 HIGD1BQ9P298 99 aa3.88□□□□□ -1.79
HLA-DOA-202ENST00000374813 MRPL34Q9BQ48 92 aaKnown RBP3.87□□□□□ -1.79
HLA-DOA-202ENST00000374813 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
HLA-DOA-202ENST00000374813 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
HLA-DOA-202ENST00000374813 K7ERJ3 54 aa3.86□□□□□ -1.79
HLA-DOA-202ENST00000374813 NDUFS5O43920 106 aa3.86□□□□□ -1.79
HLA-DOA-202ENST00000374813 S100A2P29034 98 aa3.86□□□□□ -1.79
HLA-DOA-202ENST00000374813 Q5W150 140 aa3.86□□□□□ -1.79
HLA-DOA-202ENST00000374813 TMEM254Q8TBM7 123 aa3.85□□□□□ -1.79
HLA-DOA-202ENST00000374813 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
HLA-DOA-202ENST00000374813 PAM16Q9Y3D7 125 aa3.84□□□□□ -1.79
HLA-DOA-202ENST00000374813 K7EQZ3 153 aa3.83□□□□□ -1.8
HLA-DOA-202ENST00000374813 PSMB2P49721 201 aa3.83□□□□□ -1.8
HLA-DOA-202ENST00000374813 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
HLA-DOA-202ENST00000374813 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
HLA-DOA-202ENST00000374813 A6NJY4 79 aa3.82□□□□□ -1.8
HLA-DOA-202ENST00000374813 SPATA45Q537H7 98 aa3.82□□□□□ -1.8
HLA-DOA-202ENST00000374813 TMEM238LA0A1B0GVL6 79 aa3.81□□□□□ -1.8
HLA-DOA-202ENST00000374813 C9JAW5 83 aa3.81□□□□□ -1.8
HLA-DOA-202ENST00000374813 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
HLA-DOA-202ENST00000374813 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
HLA-DOA-202ENST00000374813 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
HLA-DOA-202ENST00000374813 A0A1B0GW54 56 aa3.78□□□□□ -1.8
HLA-DOA-202ENST00000374813 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
HLA-DOA-202ENST00000374813 COX6CP09669 75 aa3.77□□□□□ -1.81
HLA-DOA-202ENST00000374813 BAALC-AS2P0C853 105 aa3.77□□□□□ -1.81
HLA-DOA-202ENST00000374813 A8MUN3 132 aa3.76□□□□□ -1.81
HLA-DOA-202ENST00000374813 PDE6GP18545 87 aa3.75□□□□□ -1.81
HLA-DOA-202ENST00000374813 VAMP8Q9BV40 100 aa3.74□□□□□ -1.81
HLA-DOA-202ENST00000374813 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
HLA-DOA-202ENST00000374813 S100A6P06703 90 aa3.73□□□□□ -1.81
HLA-DOA-202ENST00000374813 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
HLA-DOA-202ENST00000374813 HSD52Q0P140 79 aa3.72□□□□□ -1.81
HLA-DOA-202ENST00000374813 C14orf132Q9NPU4 83 aa3.72□□□□□ -1.81
HLA-DOA-202ENST00000374813 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
HLA-DOA-202ENST00000374813 SCGB1C2P0DMR2 95 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms