RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 UTP20O75691 2785 aaKnown RBP8.39□□□□□ -1.07
SNX30-201ENST00000374232 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
SNX30-201ENST00000374232 SPRR1BP22528 89 aa8.37□□□□□ -1.07
SNX30-201ENST00000374232 TACC2O95359 2948 aa8.36□□□□□ -1.07
SNX30-201ENST00000374232 UBR5O95071 2799 aaPredicted RBP8.35□□□□□ -1.07
SNX30-201ENST00000374232 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
SNX30-201ENST00000374232 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
SNX30-201ENST00000374232 CHD9Q3L8U1 2897 aa8.33□□□□□ -1.08
SNX30-201ENST00000374232 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
SNX30-201ENST00000374232 DCHS1Q96JQ0 3298 aa8.28□□□□□ -1.08
SNX30-201ENST00000374232 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
SNX30-201ENST00000374232 TNRC18O15417 2968 aaPredicted RBP8.28□□□□□ -1.08
SNX30-201ENST00000374232 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
SNX30-201ENST00000374232 NBEAQ8NFP9 2946 aa8.27□□□□□ -1.09
SNX30-201ENST00000374232 HIVEP1P15822 2718 aa8.27□□□□□ -1.09
SNX30-201ENST00000374232 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
SNX30-201ENST00000374232 KRTAP25-1Q3LHN0 102 aa8.27□□□□□ -1.09
SNX30-201ENST00000374232 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
SNX30-201ENST00000374232 LOC400499M0QZD8 3231 aa8.25□□□□□ -1.09
SNX30-201ENST00000374232 DMXL1Q9Y485 3027 aa8.23□□□□□ -1.09
SNX30-201ENST00000374232 A0A1B0GVY2 172 aa8.18□□□□□ -1.1
SNX30-201ENST00000374232 A6NN06 94 aa8.17□□□□□ -1.1
SNX30-201ENST00000374232 CELSR2Q9HCU4 2923 aa8.17□□□□□ -1.1
SNX30-201ENST00000374232 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
SNX30-201ENST00000374232 TNP1P09430 55 aa8.12□□□□□ -1.11
SNX30-201ENST00000374232 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
SNX30-201ENST00000374232 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
SNX30-201ENST00000374232 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
SNX30-201ENST00000374232 CELSR1Q9NYQ6 3014 aa8.05□□□□□ -1.12
SNX30-201ENST00000374232 LAMA5O15230 3695 aa8.05□□□□□ -1.12
SNX30-201ENST00000374232 FLNCQ14315 2725 aa8□□□□□ -1.13
SNX30-201ENST00000374232 CSMD1Q96PZ7 3565 aa8□□□□□ -1.13
SNX30-201ENST00000374232 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
SNX30-201ENST00000374232 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.14
SNX30-201ENST00000374232 TENM1Q9UKZ4 2725 aa7.96□□□□□ -1.14
SNX30-201ENST00000374232 NBPF19A0A087WUL8 3843 aa7.95□□□□□ -1.14
SNX30-201ENST00000374232 DCHS2Q6V1P9 2916 aa7.93□□□□□ -1.14
SNX30-201ENST00000374232 NF1P21359 2839 aa7.91□□□□□ -1.14
SNX30-201ENST00000374232 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
SNX30-201ENST00000374232 RELNP78509 3460 aa7.85□□□□□ -1.15
SNX30-201ENST00000374232 NIPBLQ6KC79 2804 aaeCLIP7.83□□□□□ -1.16
SNX30-201ENST00000374232 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
SNX30-201ENST00000374232 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
SNX30-201ENST00000374232 FBN2P35556 2912 aa7.76□□□□□ -1.17
SNX30-201ENST00000374232 TENM4Q6N022 2769 aa7.76□□□□□ -1.17
SNX30-201ENST00000374232 H0YAA0 97 aa7.74□□□□□ -1.17
SNX30-201ENST00000374232 CUBNO60494 3623 aa7.72□□□□□ -1.17
SNX30-201ENST00000374232 PKD1L1Q8TDX9 2849 aa7.71□□□□□ -1.18
SNX30-201ENST00000374232 VWFP04275 2813 aa7.69□□□□□ -1.18
SNX30-201ENST00000374232 XP32Q5T750 250 aa7.67□□□□□ -1.18
SNX30-201ENST00000374232 PDZD2O15018 2839 aa7.65□□□□□ -1.18
SNX30-201ENST00000374232 SMG1Q96Q15 3661 aaKnown RBP7.64□□□□□ -1.19
SNX30-201ENST00000374232 P0C880 135 aa7.63□□□□□ -1.19
SNX30-201ENST00000374232 TENM3Q9P273 2699 aa7.63□□□□□ -1.19
SNX30-201ENST00000374232 SPENQ96T58 3664 aaKnown RBP7.63□□□□□ -1.19
SNX30-201ENST00000374232 ZANQ9Y493 2812 aa7.62□□□□□ -1.19
SNX30-201ENST00000374232 TGP01266 2768 aa7.62□□□□□ -1.19
SNX30-201ENST00000374232 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
SNX30-201ENST00000374232 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
SNX30-201ENST00000374232 ZFHX3Q15911 3703 aa7.56□□□□□ -1.2
SNX30-201ENST00000374232 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
SNX30-201ENST00000374232 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.2
SNX30-201ENST00000374232 DMDP11532 3685 aa7.52□□□□□ -1.21
SNX30-201ENST00000374232 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
SNX30-201ENST00000374232 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
SNX30-201ENST00000374232 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
SNX30-201ENST00000374232 MXRA5Q9NR99 2828 aa7.38□□□□□ -1.23
SNX30-201ENST00000374232 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
SNX30-201ENST00000374232 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
SNX30-201ENST00000374232 SRRM2Q9UQ35 2752 aaKnown RBP7.27□□□□□ -1.25
SNX30-201ENST00000374232 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
SNX30-201ENST00000374232 COL7A1Q02388 2944 aa7.2□□□□□ -1.26
SNX30-201ENST00000374232 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
SNX30-201ENST00000374232 CSMD2Q7Z408 3487 aa7.19□□□□□ -1.26
SNX30-201ENST00000374232 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
SNX30-201ENST00000374232 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
SNX30-201ENST00000374232 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
SNX30-201ENST00000374232 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
SNX30-201ENST00000374232 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
SNX30-201ENST00000374232 FBN1P35555 2871 aaKnown RBP7.02□□□□□ -1.29
SNX30-201ENST00000374232 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
SNX30-201ENST00000374232 VPS13CQ709C8 3753 aa6.98□□□□□ -1.29
SNX30-201ENST00000374232 TRRAPQ9Y4A5 3859 aa6.97□□□□□ -1.29
SNX30-201ENST00000374232 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
SNX30-201ENST00000374232 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
SNX30-201ENST00000374232 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
SNX30-201ENST00000374232 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
SNX30-201ENST00000374232 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
SNX30-201ENST00000374232 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
SNX30-201ENST00000374232 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
SNX30-201ENST00000374232 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
SNX30-201ENST00000374232 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
SNX30-201ENST00000374232 AKAP9Q99996 3911 aa6.42□□□□□ -1.38
SNX30-201ENST00000374232 INE1O15225 51 aa6.41□□□□□ -1.38
SNX30-201ENST00000374232 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
SNX30-201ENST00000374232 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
SNX30-201ENST00000374232 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
SNX30-201ENST00000374232 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
SNX30-201ENST00000374232 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
SNX30-201ENST00000374232 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms