RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TNXBP22105 4242 aa9.39□□□□□ -0.91
C9orf78-201ENST00000372447 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
C9orf78-201ENST00000372447 SNURFQ9Y675 71 aa9.37□□□□□ -0.91
C9orf78-201ENST00000372447 A0A087X002 238 aa9.37□□□□□ -0.91
C9orf78-201ENST00000372447 WFDC13Q8IUB5 93 aa9.37□□□□□ -0.91
C9orf78-201ENST00000372447 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
C9orf78-201ENST00000372447 MT1HL1P0DM35 61 aa9.36□□□□□ -0.91
C9orf78-201ENST00000372447 SSBP3-AS1Q7Z2R9 100 aa9.36□□□□□ -0.91
C9orf78-201ENST00000372447 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
C9orf78-201ENST00000372447 NDUFB1O75438 58 aa9.34□□□□□ -0.91
C9orf78-201ENST00000372447 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
C9orf78-201ENST00000372447 CD164Q04900 197 aa9.33□□□□□ -0.92
C9orf78-201ENST00000372447 H7BZZ5 65 aa9.32□□□□□ -0.92
C9orf78-201ENST00000372447 J3QL48 77 aa9.32□□□□□ -0.92
C9orf78-201ENST00000372447 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
C9orf78-201ENST00000372447 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
C9orf78-201ENST00000372447 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
C9orf78-201ENST00000372447 NDUFC1O43677 76 aa9.3□□□□□ -0.92
C9orf78-201ENST00000372447 DMBT1Q9UGM3 2413 aaPredicted RBP9.3□□□□□ -0.92
C9orf78-201ENST00000372447 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
C9orf78-201ENST00000372447 C5orf47Q569G3 176 aa9.27□□□□□ -0.93
C9orf78-201ENST00000372447 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
C9orf78-201ENST00000372447 A0A1B0GVX0 72 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 C8orf17Q9NRJ1 99 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 HERC1Q15751 4861 aa9.24□□□□□ -0.93
C9orf78-201ENST00000372447 IGHV6-1A0A0B4J1U7 121 aa9.22□□□□□ -0.93
C9orf78-201ENST00000372447 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
C9orf78-201ENST00000372447 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
C9orf78-201ENST00000372447 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
C9orf78-201ENST00000372447 MP68P56378 58 aa9.18□□□□□ -0.94
C9orf78-201ENST00000372447 Q5XG85 94 aa9.18□□□□□ -0.94
C9orf78-201ENST00000372447 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
C9orf78-201ENST00000372447 H0Y9P7 68 aa9.14□□□□□ -0.95
C9orf78-201ENST00000372447 ATP5EP56381 51 aaPredicted RBP9.14□□□□□ -0.95
C9orf78-201ENST00000372447 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
C9orf78-201ENST00000372447 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
C9orf78-201ENST00000372447 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
C9orf78-201ENST00000372447 H3BPC8 53 aa9.12□□□□□ -0.95
C9orf78-201ENST00000372447 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
C9orf78-201ENST00000372447 C1orf195Q5TG92 126 aa9.12□□□□□ -0.95
C9orf78-201ENST00000372447 LINC00208Q96KT6 92 aa9.12□□□□□ -0.95
C9orf78-201ENST00000372447 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
C9orf78-201ENST00000372447 TRAV22A0A0B4J277 110 aa9.1□□□□□ -0.95
C9orf78-201ENST00000372447 SPAG11AQ6PDA7 123 aa9.1□□□□□ -0.95
C9orf78-201ENST00000372447 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
C9orf78-201ENST00000372447 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
C9orf78-201ENST00000372447 NDUFS5O43920 106 aa9.09□□□□□ -0.95
C9orf78-201ENST00000372447 SPINK1P00995 79 aa9.07□□□□□ -0.96
C9orf78-201ENST00000372447 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
C9orf78-201ENST00000372447 LINC00313P59037 77 aa9.03□□□□□ -0.96
C9orf78-201ENST00000372447 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
C9orf78-201ENST00000372447 HMCN2Q8NDA2 5059 aa9.01□□□□□ -0.97
C9orf78-201ENST00000372447 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
C9orf78-201ENST00000372447 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
C9orf78-201ENST00000372447 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
C9orf78-201ENST00000372447 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
C9orf78-201ENST00000372447 PRR4Q16378 134 aa8.94□□□□□ -0.98
C9orf78-201ENST00000372447 Q5W150 140 aa8.93□□□□□ -0.98
C9orf78-201ENST00000372447 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
C9orf78-201ENST00000372447 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
C9orf78-201ENST00000372447 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
C9orf78-201ENST00000372447 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
C9orf78-201ENST00000372447 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
C9orf78-201ENST00000372447 LPAP08519 4548 aa8.88□□□□□ -0.99
C9orf78-201ENST00000372447 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
C9orf78-201ENST00000372447 FP248Q71RG6 208 aaPredicted RBP8.86□□□□□ -0.99
C9orf78-201ENST00000372447 LRP2P98164 4655 aa8.84□□□□□ -0.99
C9orf78-201ENST00000372447 C4orf26Q17RF5 130 aa8.78□□□□□ -1
C9orf78-201ENST00000372447 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
C9orf78-201ENST00000372447 IGKV2-30P06310 120 aa8.75□□□□□ -1.01
C9orf78-201ENST00000372447 MPLKIPQ8TAP9 179 aa8.73□□□□□ -1.01
C9orf78-201ENST00000372447 C9orf92A6NGG3 77 aa8.71□□□□□ -1.02
C9orf78-201ENST00000372447 COA5Q86WW8 74 aa8.71□□□□□ -1.02
C9orf78-201ENST00000372447 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
C9orf78-201ENST00000372447 HRES1P13985 223 aa8.68□□□□□ -1.02
C9orf78-201ENST00000372447 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
C9orf78-201ENST00000372447 IGKV2D-30A0A075B6S6 120 aa8.66□□□□□ -1.02
C9orf78-201ENST00000372447 Q1T7F1 81 aa8.66□□□□□ -1.02
C9orf78-201ENST00000372447 A8MUU9 505 aa8.66□□□□□ -1.02
C9orf78-201ENST00000372447 XP32Q5T750 250 aa8.61□□□□□ -1.03
C9orf78-201ENST00000372447 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
C9orf78-201ENST00000372447 ACYP2P14621 99 aa8.6□□□□□ -1.03
C9orf78-201ENST00000372447 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
C9orf78-201ENST00000372447 V9GYY9 64 aa8.59□□□□□ -1.03
C9orf78-201ENST00000372447 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
C9orf78-201ENST00000372447 Q75L30 129 aa8.54□□□□□ -1.04
C9orf78-201ENST00000372447 PSPHP1O15172 72 aa8.51□□□□□ -1.05
C9orf78-201ENST00000372447 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
C9orf78-201ENST00000372447 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
C9orf78-201ENST00000372447 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
C9orf78-201ENST00000372447 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
C9orf78-201ENST00000372447 MUC2Q02817 5179 aa8.47□□□□□ -1.05
C9orf78-201ENST00000372447 A8MUN3 132 aa8.47□□□□□ -1.05
C9orf78-201ENST00000372447 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.05
C9orf78-201ENST00000372447 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
C9orf78-201ENST00000372447 SPINK7P58062 85 aa8.43□□□□□ -1.06
C9orf78-201ENST00000372447 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms