RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 MMP24-AS1A0A0U1RRL7 71 aa10.3□□□□□ -0.76
CD40-202ENST00000372285 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
CD40-202ENST00000372285 UQCRQO14949 82 aa10.28□□□□□ -0.76
CD40-202ENST00000372285 CASC2Q6XLA1 102 aa10.28□□□□□ -0.76
CD40-202ENST00000372285 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
CD40-202ENST00000372285 IGHV6-1A0A0B4J1U7 121 aa10.27□□□□□ -0.76
CD40-202ENST00000372285 CCDC179H3BU77 68 aa10.27□□□□□ -0.76
CD40-202ENST00000372285 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.76
CD40-202ENST00000372285 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
CD40-202ENST00000372285 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
CD40-202ENST00000372285 NOTCH2NLQ7Z3S9 236 aa10.21□□□□□ -0.78
CD40-202ENST00000372285 C8orf87E5RJ46 101 aa10.2□□□□□ -0.78
CD40-202ENST00000372285 TMEM254Q8TBM7 123 aa10.17□□□□□ -0.78
CD40-202ENST00000372285 FLG2Q5D862 2391 aaPredicted RBP10.16□□□□□ -0.78
CD40-202ENST00000372285 BIRC6Q9NR09 4857 aa10.16□□□□□ -0.78
CD40-202ENST00000372285 MRPL34Q9BQ48 92 aaKnown RBP10.15□□□□□ -0.78
CD40-202ENST00000372285 LRP1Q07954 4544 aaKnown RBP10.14□□□□□ -0.79
CD40-202ENST00000372285 LINC00313P59037 77 aa10.14□□□□□ -0.79
CD40-202ENST00000372285 TNXBP22105 4242 aa10.14□□□□□ -0.79
CD40-202ENST00000372285 C20orf197Q8N268 126 aa10.12□□□□□ -0.79
CD40-202ENST00000372285 FAT3Q8TDW7 4589 aa10.12□□□□□ -0.79
CD40-202ENST00000372285 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
CD40-202ENST00000372285 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
CD40-202ENST00000372285 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
CD40-202ENST00000372285 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
CD40-202ENST00000372285 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
CD40-202ENST00000372285 KRTAP16-1A8MUX0 517 aa10.06□□□□□ -0.8
CD40-202ENST00000372285 OXTP01178 125 aa10.06□□□□□ -0.8
CD40-202ENST00000372285 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
CD40-202ENST00000372285 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
CD40-202ENST00000372285 NDUFS5O43920 106 aa10.04□□□□□ -0.8
CD40-202ENST00000372285 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
CD40-202ENST00000372285 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.8
CD40-202ENST00000372285 RETNLBQ9BQ08 111 aa10.02□□□□□ -0.8
CD40-202ENST00000372285 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
CD40-202ENST00000372285 MYCBP2O75592 4640 aa10□□□□□ -0.81
CD40-202ENST00000372285 H0Y9P7 68 aa10□□□□□ -0.81
CD40-202ENST00000372285 MP68P56378 58 aa10□□□□□ -0.81
CD40-202ENST00000372285 TRAV22A0A0B4J277 110 aa9.99□□□□□ -0.81
CD40-202ENST00000372285 H3BPC8 53 aa9.98□□□□□ -0.81
CD40-202ENST00000372285 ZCCHC13Q8WW36 166 aaKnown RBP9.98□□□□□ -0.81
CD40-202ENST00000372285 NDUFC1O43677 76 aa9.96□□□□□ -0.82
CD40-202ENST00000372285 H7BZZ5 65 aa9.94□□□□□ -0.82
CD40-202ENST00000372285 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
CD40-202ENST00000372285 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
CD40-202ENST00000372285 KRTAP13-3Q3SY46 172 aa9.93□□□□□ -0.82
CD40-202ENST00000372285 Q5W150 140 aa9.91□□□□□ -0.82
CD40-202ENST00000372285 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
CD40-202ENST00000372285 TMEM258P61165 79 aa9.9□□□□□ -0.83
CD40-202ENST00000372285 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.83
CD40-202ENST00000372285 HERC2O95714 4834 aa9.89□□□□□ -0.83
CD40-202ENST00000372285 C20orf166-AS1Q96NR2 134 aa9.85□□□□□ -0.83
CD40-202ENST00000372285 A8MUU9 505 aa9.85□□□□□ -0.83
CD40-202ENST00000372285 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
CD40-202ENST00000372285 ABCA13Q86UQ4 5058 aa9.81□□□□□ -0.84
CD40-202ENST00000372285 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
CD40-202ENST00000372285 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
CD40-202ENST00000372285 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
CD40-202ENST00000372285 Q75L30 129 aa9.76□□□□□ -0.85
CD40-202ENST00000372285 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
CD40-202ENST00000372285 PRR4Q16378 134 aa9.74□□□□□ -0.85
CD40-202ENST00000372285 CYP4F30PQ9H0H9 118 aa9.74□□□□□ -0.85
CD40-202ENST00000372285 J3QL48 77 aa9.73□□□□□ -0.85
CD40-202ENST00000372285 IGKV2-30P06310 120 aa9.73□□□□□ -0.85
CD40-202ENST00000372285 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
CD40-202ENST00000372285 SPANXA2-OT1Q8N9U9 137 aa9.7□□□□□ -0.86
CD40-202ENST00000372285 XP32Q5T750 250 aa9.68□□□□□ -0.86
CD40-202ENST00000372285 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
CD40-202ENST00000372285 RPL37P61927 97 aaKnown RBP9.65□□□□□ -0.87
CD40-202ENST00000372285 PCLOQ9Y6V0 5065 aa9.64□□□□□ -0.87
CD40-202ENST00000372285 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
CD40-202ENST00000372285 C7orf65Q6ZTY9 151 aa9.61□□□□□ -0.87
CD40-202ENST00000372285 RPS28P62857 69 aaKnown RBP9.6□□□□□ -0.87
CD40-202ENST00000372285 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
CD40-202ENST00000372285 ATP11AUNQ6ZP68 121 aa9.59□□□□□ -0.87
CD40-202ENST00000372285 HRES1P13985 223 aa9.58□□□□□ -0.88
CD40-202ENST00000372285 SPINK7P58062 85 aa9.51□□□□□ -0.89
CD40-202ENST00000372285 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
CD40-202ENST00000372285 COA5Q86WW8 74 aa9.4□□□□□ -0.9
CD40-202ENST00000372285 ACYP2P14621 99 aa9.39□□□□□ -0.91
CD40-202ENST00000372285 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
CD40-202ENST00000372285 LPAP08519 4548 aa9.39□□□□□ -0.91
CD40-202ENST00000372285 LRP2P98164 4655 aa9.38□□□□□ -0.91
CD40-202ENST00000372285 SMIM26A0A096LP01 95 aa9.35□□□□□ -0.91
CD40-202ENST00000372285 A8MUN3 132 aa9.34□□□□□ -0.91
CD40-202ENST00000372285 SEC61BP60468 96 aaKnown RBP9.32□□□□□ -0.92
CD40-202ENST00000372285 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
CD40-202ENST00000372285 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
CD40-202ENST00000372285 HERC1Q15751 4861 aa9.23□□□□□ -0.93
CD40-202ENST00000372285 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
CD40-202ENST00000372285 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
CD40-202ENST00000372285 Q1T7F1 81 aa9.17□□□□□ -0.94
CD40-202ENST00000372285 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.94
CD40-202ENST00000372285 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
CD40-202ENST00000372285 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
CD40-202ENST00000372285 V9GYY9 64 aa9.12□□□□□ -0.95
CD40-202ENST00000372285 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
CD40-202ENST00000372285 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
CD40-202ENST00000372285 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
CD40-202ENST00000372285 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms