RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
LDB3-204ENST00000372066 OXTP01178 125 aa8.44□□□□□ -1.06
LDB3-204ENST00000372066 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
LDB3-204ENST00000372066 A0A0U1RQV1 116 aa8.42□□□□□ -1.06
LDB3-204ENST00000372066 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
LDB3-204ENST00000372066 SNURFQ9Y675 71 aa8.41□□□□□ -1.06
LDB3-204ENST00000372066 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
LDB3-204ENST00000372066 NDUFB1O75438 58 aa8.39□□□□□ -1.07
LDB3-204ENST00000372066 MOBPQ13875 183 aa8.39□□□□□ -1.07
LDB3-204ENST00000372066 DEFB116Q30KQ4 102 aa8.39□□□□□ -1.07
LDB3-204ENST00000372066 Q5XG85 94 aa8.38□□□□□ -1.07
LDB3-204ENST00000372066 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
LDB3-204ENST00000372066 SMIM26A0A096LP01 95 aa8.36□□□□□ -1.07
LDB3-204ENST00000372066 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
LDB3-204ENST00000372066 CD164Q04900 197 aa8.35□□□□□ -1.07
LDB3-204ENST00000372066 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
LDB3-204ENST00000372066 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
LDB3-204ENST00000372066 Q96NJ1 140 aa8.35□□□□□ -1.07
LDB3-204ENST00000372066 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
LDB3-204ENST00000372066 H3BPC8 53 aa8.31□□□□□ -1.08
LDB3-204ENST00000372066 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
LDB3-204ENST00000372066 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
LDB3-204ENST00000372066 MP68P56378 58 aa8.31□□□□□ -1.08
LDB3-204ENST00000372066 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
LDB3-204ENST00000372066 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
LDB3-204ENST00000372066 ANAPC11Q9NYG5 84 aa8.29□□□□□ -1.08
LDB3-204ENST00000372066 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
LDB3-204ENST00000372066 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
LDB3-204ENST00000372066 A0A1B0GVX0 72 aa8.27□□□□□ -1.09
LDB3-204ENST00000372066 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
LDB3-204ENST00000372066 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
LDB3-204ENST00000372066 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
LDB3-204ENST00000372066 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
LDB3-204ENST00000372066 H0Y9P7 68 aa8.22□□□□□ -1.09
LDB3-204ENST00000372066 TRAV22A0A0B4J277 110 aa8.2□□□□□ -1.1
LDB3-204ENST00000372066 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
LDB3-204ENST00000372066 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
LDB3-204ENST00000372066 LINC00208Q96KT6 92 aa8.18□□□□□ -1.1
LDB3-204ENST00000372066 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
LDB3-204ENST00000372066 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
LDB3-204ENST00000372066 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
LDB3-204ENST00000372066 A0A087X002 238 aa8.16□□□□□ -1.1
LDB3-204ENST00000372066 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
LDB3-204ENST00000372066 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
LDB3-204ENST00000372066 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
LDB3-204ENST00000372066 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
LDB3-204ENST00000372066 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
LDB3-204ENST00000372066 C1orf64Q8NEQ6 169 aa8.14□□□□□ -1.11
LDB3-204ENST00000372066 TNXBP22105 4242 aa8.13□□□□□ -1.11
LDB3-204ENST00000372066 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
LDB3-204ENST00000372066 LRP2P98164 4655 aa8.12□□□□□ -1.11
LDB3-204ENST00000372066 NDUFS5O43920 106 aa8.1□□□□□ -1.11
LDB3-204ENST00000372066 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
LDB3-204ENST00000372066 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
LDB3-204ENST00000372066 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
LDB3-204ENST00000372066 SPINK1P00995 79 aa8.06□□□□□ -1.12
LDB3-204ENST00000372066 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
LDB3-204ENST00000372066 Q1T7F1 81 aa8.06□□□□□ -1.12
LDB3-204ENST00000372066 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
LDB3-204ENST00000372066 RPS29P62273 56 aaKnown RBP8.05□□□□□ -1.12
LDB3-204ENST00000372066 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
LDB3-204ENST00000372066 LINC00313P59037 77 aa8.04□□□□□ -1.12
LDB3-204ENST00000372066 V9GYY9 64 aa8.03□□□□□ -1.12
LDB3-204ENST00000372066 LOC101927531A0A1B0GV80 90 aa8.02□□□□□ -1.13
LDB3-204ENST00000372066 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
LDB3-204ENST00000372066 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
LDB3-204ENST00000372066 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
LDB3-204ENST00000372066 KRTAP13-3Q3SY46 172 aa7.97□□□□□ -1.13
LDB3-204ENST00000372066 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
LDB3-204ENST00000372066 PRR4Q16378 134 aa7.97□□□□□ -1.13
LDB3-204ENST00000372066 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
LDB3-204ENST00000372066 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
LDB3-204ENST00000372066 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
LDB3-204ENST00000372066 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
LDB3-204ENST00000372066 Q5W150 140 aa7.92□□□□□ -1.14
LDB3-204ENST00000372066 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
LDB3-204ENST00000372066 LPAP08519 4548 aa7.88□□□□□ -1.15
LDB3-204ENST00000372066 COA5Q86WW8 74 aa7.86□□□□□ -1.15
LDB3-204ENST00000372066 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
LDB3-204ENST00000372066 HRES1P13985 223 aa7.76□□□□□ -1.17
LDB3-204ENST00000372066 ACYP2P14621 99 aa7.76□□□□□ -1.17
LDB3-204ENST00000372066 Q5VV11 94 aa7.76□□□□□ -1.17
LDB3-204ENST00000372066 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
LDB3-204ENST00000372066 PSPHP1O15172 72 aa7.74□□□□□ -1.17
LDB3-204ENST00000372066 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
LDB3-204ENST00000372066 A8MUN3 132 aa7.73□□□□□ -1.17
LDB3-204ENST00000372066 Q75L30 129 aa7.73□□□□□ -1.17
LDB3-204ENST00000372066 MUC2Q02817 5179 aa7.71□□□□□ -1.18
LDB3-204ENST00000372066 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.18
LDB3-204ENST00000372066 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
LDB3-204ENST00000372066 A8MUU9 505 aa7.7□□□□□ -1.18
LDB3-204ENST00000372066 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
LDB3-204ENST00000372066 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
LDB3-204ENST00000372066 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
LDB3-204ENST00000372066 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
LDB3-204ENST00000372066 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
LDB3-204ENST00000372066 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
LDB3-204ENST00000372066 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
LDB3-204ENST00000372066 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.2
LDB3-204ENST00000372066 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms