RNA–Protein interactions for RNA: ENST00000369893.9

SFXN2-201, Transcript of sideroflexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN2, Length 6,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-201ENST00000369893 TEX15Q9BXT5 2789 aa5.96□□□□□ -1.46
SFXN2-201ENST00000369893 KALRNO60229 2985 aa5.95□□□□□ -1.46
SFXN2-201ENST00000369893 LCE6AA0A183 80 aa5.93□□□□□ -1.46
SFXN2-201ENST00000369893 TNP1P09430 55 aa5.93□□□□□ -1.46
SFXN2-201ENST00000369893 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
SFXN2-201ENST00000369893 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
SFXN2-201ENST00000369893 RPS29P62273 56 aaKnown RBP5.88□□□□□ -1.47
SFXN2-201ENST00000369893 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
SFXN2-201ENST00000369893 SETXQ7Z333 2677 aaKnown RBP5.87□□□□□ -1.47
SFXN2-201ENST00000369893 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
SFXN2-201ENST00000369893 ZZEF1O43149 2961 aa5.86□□□□□ -1.47
SFXN2-201ENST00000369893 TACC2O95359 2948 aa5.86□□□□□ -1.47
SFXN2-201ENST00000369893 GCN1Q92616 2671 aaKnown RBP5.86□□□□□ -1.47
SFXN2-201ENST00000369893 CHD6Q8TD26 2715 aa5.85□□□□□ -1.47
SFXN2-201ENST00000369893 KRTAP11-1Q8IUC1 163 aa5.84□□□□□ -1.48
SFXN2-201ENST00000369893 ITPR2Q14571 2701 aa5.79□□□□□ -1.48
SFXN2-201ENST00000369893 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
SFXN2-201ENST00000369893 UNC79Q9P2D8 2635 aa5.78□□□□□ -1.48
SFXN2-201ENST00000369893 SVEP1Q4LDE5 3571 aa5.78□□□□□ -1.48
SFXN2-201ENST00000369893 COL6A5A8TX70 2615 aa5.77□□□□□ -1.49
SFXN2-201ENST00000369893 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
SFXN2-201ENST00000369893 ASH1LQ9NR48 2969 aaKnown RBP5.75□□□□□ -1.49
SFXN2-201ENST00000369893 FLNCQ14315 2725 aa5.74□□□□□ -1.49
SFXN2-201ENST00000369893 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
SFXN2-201ENST00000369893 BSNQ9UPA5 3926 aa5.71□□□□□ -1.49
SFXN2-201ENST00000369893 CELSR2Q9HCU4 2923 aa5.71□□□□□ -1.5
SFXN2-201ENST00000369893 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
SFXN2-201ENST00000369893 ITPR1Q14643 2758 aa5.68□□□□□ -1.5
SFXN2-201ENST00000369893 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
SFXN2-201ENST00000369893 FLG2Q5D862 2391 aaPredicted RBP5.67□□□□□ -1.5
SFXN2-201ENST00000369893 APCP25054 2843 aa5.67□□□□□ -1.5
SFXN2-201ENST00000369893 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
SFXN2-201ENST00000369893 HIVEP1P15822 2718 aa5.66□□□□□ -1.5
SFXN2-201ENST00000369893 STAB1Q9NY15 2570 aa5.66□□□□□ -1.5
SFXN2-201ENST00000369893 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.51
SFXN2-201ENST00000369893 ZFHX3Q15911 3703 aa5.65□□□□□ -1.51
SFXN2-201ENST00000369893 NBEAL2Q6ZNJ1 2754 aa5.64□□□□□ -1.51
SFXN2-201ENST00000369893 P0C880 135 aa5.64□□□□□ -1.51
SFXN2-201ENST00000369893 UBR5O95071 2799 aaPredicted RBP5.63□□□□□ -1.51
SFXN2-201ENST00000369893 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
SFXN2-201ENST00000369893 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
SFXN2-201ENST00000369893 HRNRQ86YZ3 2850 aaPredicted RBP5.6□□□□□ -1.51
SFXN2-201ENST00000369893 CUBNO60494 3623 aa5.6□□□□□ -1.51
SFXN2-201ENST00000369893 KRTAP21-3Q3LHN1 58 aa5.58□□□□□ -1.52
SFXN2-201ENST00000369893 TENM4Q6N022 2769 aa5.56□□□□□ -1.52
SFXN2-201ENST00000369893 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
SFXN2-201ENST00000369893 H0YAA0 97 aa5.56□□□□□ -1.52
SFXN2-201ENST00000369893 VPS13CQ709C8 3753 aa5.56□□□□□ -1.52
SFXN2-201ENST00000369893 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
SFXN2-201ENST00000369893 DMBT1Q9UGM3 2413 aaPredicted RBP5.56□□□□□ -1.52
SFXN2-201ENST00000369893 NBEAL1Q6ZS30 2694 aa5.54□□□□□ -1.52
SFXN2-201ENST00000369893 CELSR1Q9NYQ6 3014 aa5.51□□□□□ -1.53
SFXN2-201ENST00000369893 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
SFXN2-201ENST00000369893 KMT2BQ9UMN6 2715 aaPredicted RBP5.5□□□□□ -1.53
SFXN2-201ENST00000369893 FBN2P35556 2912 aa5.49□□□□□ -1.53
SFXN2-201ENST00000369893 NIPBLQ6KC79 2804 aaeCLIP5.48□□□□□ -1.53
SFXN2-201ENST00000369893 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
SFXN2-201ENST00000369893 XP32Q5T750 250 aa5.47□□□□□ -1.53
SFXN2-201ENST00000369893 NSD1Q96L73 2696 aaPredicted RBP5.44□□□□□ -1.54
SFXN2-201ENST00000369893 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
SFXN2-201ENST00000369893 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
SFXN2-201ENST00000369893 NF1P21359 2839 aa5.36□□□□□ -1.55
SFXN2-201ENST00000369893 PDZD2O15018 2839 aa5.33□□□□□ -1.56
SFXN2-201ENST00000369893 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
SFXN2-201ENST00000369893 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
SFXN2-201ENST00000369893 STAB2Q8WWQ8 2551 aa5.31□□□□□ -1.56
SFXN2-201ENST00000369893 ZNF469Q96JG9 3925 aaPredicted RBP5.28□□□□□ -1.56
SFXN2-201ENST00000369893 TRRAPQ9Y4A5 3859 aa5.27□□□□□ -1.57
SFXN2-201ENST00000369893 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
SFXN2-201ENST00000369893 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
SFXN2-201ENST00000369893 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
SFXN2-201ENST00000369893 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
SFXN2-201ENST00000369893 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
SFXN2-201ENST00000369893 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
SFXN2-201ENST00000369893 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
SFXN2-201ENST00000369893 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
SFXN2-201ENST00000369893 PKD1L1Q8TDX9 2849 aa5.12□□□□□ -1.59
SFXN2-201ENST00000369893 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
SFXN2-201ENST00000369893 TENM1Q9UKZ4 2725 aa5.1□□□□□ -1.59
SFXN2-201ENST00000369893 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
SFXN2-201ENST00000369893 VWFP04275 2813 aa5.04□□□□□ -1.6
SFXN2-201ENST00000369893 INE1O15225 51 aa5.02□□□□□ -1.61
SFXN2-201ENST00000369893 HUWE1Q7Z6Z7 4374 aaKnown RBP5.02□□□□□ -1.61
SFXN2-201ENST00000369893 CSMD3Q7Z407 3707 aa5□□□□□ -1.61
SFXN2-201ENST00000369893 TENM3Q9P273 2699 aa4.95□□□□□ -1.62
SFXN2-201ENST00000369893 TGP01266 2768 aa4.93□□□□□ -1.62
SFXN2-201ENST00000369893 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
SFXN2-201ENST00000369893 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
SFXN2-201ENST00000369893 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
SFXN2-201ENST00000369893 COL7A1Q02388 2944 aa4.8□□□□□ -1.64
SFXN2-201ENST00000369893 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
SFXN2-201ENST00000369893 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
SFXN2-201ENST00000369893 DNAH9Q9NYC9 4486 aa4.77□□□□□ -1.65
SFXN2-201ENST00000369893 CMYA5Q8N3K9 4069 aa4.75□□□□□ -1.65
SFXN2-201ENST00000369893 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
SFXN2-201ENST00000369893 LYSTQ99698 3801 aa4.62□□□□□ -1.67
SFXN2-201ENST00000369893 ANK2Q01484 3957 aa4.62□□□□□ -1.67
SFXN2-201ENST00000369893 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
SFXN2-201ENST00000369893 PRKDCP78527 4128 aaKnown RBP4.6□□□□□ -1.67
SFXN2-201ENST00000369893 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms