RNA–Protein interactions for RNA: ENST00000369864.4

AMIGO1-202, Transcript of adhesion molecule with Ig like domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMIGO1, Length 5,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO1-202ENST00000369864 HIVEP1P15822 2718 aa10.77□□□□□ -0.69
AMIGO1-202ENST00000369864 M0QZ58 72 aa10.75□□□□□ -0.69
AMIGO1-202ENST00000369864 NIPBLQ6KC79 2804 aaeCLIP10.74□□□□□ -0.69
AMIGO1-202ENST00000369864 APCP25054 2843 aa10.73□□□□□ -0.69
AMIGO1-202ENST00000369864 KRTAP11-1Q8IUC1 163 aa10.71□□□□□ -0.69
AMIGO1-202ENST00000369864 KRTAP7-1Q8IUC3 87 aa10.7□□□□□ -0.7
AMIGO1-202ENST00000369864 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
AMIGO1-202ENST00000369864 NDUFAF8A1L188 74 aa10.66□□□□□ -0.7
AMIGO1-202ENST00000369864 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
AMIGO1-202ENST00000369864 DMXL1Q9Y485 3027 aa10.64□□□□□ -0.71
AMIGO1-202ENST00000369864 LOC400499M0QZD8 3231 aa10.64□□□□□ -0.71
AMIGO1-202ENST00000369864 KMT2BQ9UMN6 2715 aaPredicted RBP10.63□□□□□ -0.71
AMIGO1-202ENST00000369864 M0R2T5 61 aa10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 DCHS2Q6V1P9 2916 aa10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 NF1P21359 2839 aa10.53□□□□□ -0.72
AMIGO1-202ENST00000369864 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
AMIGO1-202ENST00000369864 SEC61BP60468 96 aaKnown RBP10.52□□□□□ -0.73
AMIGO1-202ENST00000369864 HRNRQ86YZ3 2850 aaPredicted RBP10.5□□□□□ -0.73
AMIGO1-202ENST00000369864 FBN2P35556 2912 aa10.5□□□□□ -0.73
AMIGO1-202ENST00000369864 TNRC18O15417 2968 aaPredicted RBP10.49□□□□□ -0.73
AMIGO1-202ENST00000369864 KRTAP13-1Q8IUC0 172 aa10.49□□□□□ -0.73
AMIGO1-202ENST00000369864 CRYBG3Q68DQ2 2970 aa10.48□□□□□ -0.73
AMIGO1-202ENST00000369864 TENM4Q6N022 2769 aa10.47□□□□□ -0.73
AMIGO1-202ENST00000369864 A8MUU9 505 aa10.46□□□□□ -0.73
AMIGO1-202ENST00000369864 MYO15AQ9UKN7 3530 aa10.44□□□□□ -0.74
AMIGO1-202ENST00000369864 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
AMIGO1-202ENST00000369864 Q5VSD8 79 aa10.41□□□□□ -0.74
AMIGO1-202ENST00000369864 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
AMIGO1-202ENST00000369864 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
AMIGO1-202ENST00000369864 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
AMIGO1-202ENST00000369864 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.77
AMIGO1-202ENST00000369864 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
AMIGO1-202ENST00000369864 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
AMIGO1-202ENST00000369864 H0YAA0 97 aa10.12□□□□□ -0.79
AMIGO1-202ENST00000369864 RELNP78509 3460 aa10.12□□□□□ -0.79
AMIGO1-202ENST00000369864 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
AMIGO1-202ENST00000369864 TENM3Q9P273 2699 aa10.1□□□□□ -0.79
AMIGO1-202ENST00000369864 DCHS1Q96JQ0 3298 aa10.08□□□□□ -0.8
AMIGO1-202ENST00000369864 CELSR1Q9NYQ6 3014 aa10.03□□□□□ -0.8
AMIGO1-202ENST00000369864 TNP1P09430 55 aa10.02□□□□□ -0.81
AMIGO1-202ENST00000369864 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
AMIGO1-202ENST00000369864 P0C880 135 aa9.96□□□□□ -0.82
AMIGO1-202ENST00000369864 PP632Q6XCG6 107 aa9.92□□□□□ -0.82
AMIGO1-202ENST00000369864 ASPMQ8IZT6 3477 aa9.9□□□□□ -0.82
AMIGO1-202ENST00000369864 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
AMIGO1-202ENST00000369864 LAMA5O15230 3695 aa9.86□□□□□ -0.83
AMIGO1-202ENST00000369864 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
AMIGO1-202ENST00000369864 PKD1L1Q8TDX9 2849 aa9.81□□□□□ -0.84
AMIGO1-202ENST00000369864 PDZD2O15018 2839 aa9.79□□□□□ -0.84
AMIGO1-202ENST00000369864 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
AMIGO1-202ENST00000369864 TGP01266 2768 aa9.73□□□□□ -0.85
AMIGO1-202ENST00000369864 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
AMIGO1-202ENST00000369864 MUC3AQ02505 3323 aa9.72□□□□□ -0.85
AMIGO1-202ENST00000369864 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
AMIGO1-202ENST00000369864 XP32Q5T750 250 aa9.67□□□□□ -0.86
AMIGO1-202ENST00000369864 FBN1P35555 2871 aaKnown RBP9.66□□□□□ -0.86
AMIGO1-202ENST00000369864 CSMD1Q96PZ7 3565 aa9.64□□□□□ -0.87
AMIGO1-202ENST00000369864 VWFP04275 2813 aa9.64□□□□□ -0.87
AMIGO1-202ENST00000369864 DMDP11532 3685 aa9.59□□□□□ -0.88
AMIGO1-202ENST00000369864 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
AMIGO1-202ENST00000369864 KRTAP21-3Q3LHN1 58 aa9.52□□□□□ -0.88
AMIGO1-202ENST00000369864 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
AMIGO1-202ENST00000369864 CUBNO60494 3623 aa9.41□□□□□ -0.9
AMIGO1-202ENST00000369864 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
AMIGO1-202ENST00000369864 NBPF19A0A087WUL8 3843 aa9.34□□□□□ -0.91
AMIGO1-202ENST00000369864 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
AMIGO1-202ENST00000369864 ZFHX3Q15911 3703 aa9.3□□□□□ -0.92
AMIGO1-202ENST00000369864 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
AMIGO1-202ENST00000369864 FBN3Q75N90 2809 aa9.22□□□□□ -0.93
AMIGO1-202ENST00000369864 CSMD2Q7Z408 3487 aa9.18□□□□□ -0.94
AMIGO1-202ENST00000369864 KRTAP3-1Q9BYR8 98 aa9.16□□□□□ -0.94
AMIGO1-202ENST00000369864 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.95
AMIGO1-202ENST00000369864 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
AMIGO1-202ENST00000369864 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
AMIGO1-202ENST00000369864 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
AMIGO1-202ENST00000369864 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
AMIGO1-202ENST00000369864 COL7A1Q02388 2944 aa8.99□□□□□ -0.97
AMIGO1-202ENST00000369864 KRTAP10-6P60371 365 aaPredicted RBP8.98□□□□□ -0.97
AMIGO1-202ENST00000369864 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
AMIGO1-202ENST00000369864 ANK3Q12955 4377 aaKnown RBP8.9□□□□□ -0.98
AMIGO1-202ENST00000369864 KRTAP15-1Q3LI76 137 aa8.89□□□□□ -0.99
AMIGO1-202ENST00000369864 BSNQ9UPA5 3926 aa8.86□□□□□ -0.99
AMIGO1-202ENST00000369864 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
AMIGO1-202ENST00000369864 INE1O15225 51 aa8.59□□□□□ -1.03
AMIGO1-202ENST00000369864 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
AMIGO1-202ENST00000369864 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
AMIGO1-202ENST00000369864 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
AMIGO1-202ENST00000369864 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
AMIGO1-202ENST00000369864 CSMD3Q7Z407 3707 aa8.29□□□□□ -1.08
AMIGO1-202ENST00000369864 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
AMIGO1-202ENST00000369864 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
AMIGO1-202ENST00000369864 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
AMIGO1-202ENST00000369864 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
AMIGO1-202ENST00000369864 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
AMIGO1-202ENST00000369864 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
AMIGO1-202ENST00000369864 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 337.8 ms