RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 TENM1Q9UKZ4 2725 aa6.44□□□□□ -1.38
GFRA1-203ENST00000369236 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
GFRA1-203ENST00000369236 PRUNE2Q8WUY3 3088 aa6.44□□□□□ -1.38
GFRA1-203ENST00000369236 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
GFRA1-203ENST00000369236 NF1P21359 2839 aa6.43□□□□□ -1.38
GFRA1-203ENST00000369236 XIRP2A4UGR9 3374 aa6.41□□□□□ -1.38
GFRA1-203ENST00000369236 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
GFRA1-203ENST00000369236 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.39
GFRA1-203ENST00000369236 PDZD2O15018 2839 aa6.39□□□□□ -1.39
GFRA1-203ENST00000369236 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
GFRA1-203ENST00000369236 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
GFRA1-203ENST00000369236 CRYBG3Q68DQ2 2970 aa6.34□□□□□ -1.4
GFRA1-203ENST00000369236 DMXL2Q8TDJ6 3036 aa6.33□□□□□ -1.4
GFRA1-203ENST00000369236 MKI67P46013 3256 aaKnown RBP6.33□□□□□ -1.4
GFRA1-203ENST00000369236 CELSR3Q9NYQ7 3312 aa6.32□□□□□ -1.4
GFRA1-203ENST00000369236 FLNCQ14315 2725 aa6.3□□□□□ -1.4
GFRA1-203ENST00000369236 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
GFRA1-203ENST00000369236 LAMA1P25391 3075 aa6.26□□□□□ -1.41
GFRA1-203ENST00000369236 INE1O15225 51 aa6.26□□□□□ -1.41
GFRA1-203ENST00000369236 USP34Q70CQ2 3546 aa6.23□□□□□ -1.41
GFRA1-203ENST00000369236 DNAH14Q0VDD8 3507 aa6.22□□□□□ -1.41
GFRA1-203ENST00000369236 XP32Q5T750 250 aa6.22□□□□□ -1.41
GFRA1-203ENST00000369236 ZZEF1O43149 2961 aa6.21□□□□□ -1.42
GFRA1-203ENST00000369236 DMXL1Q9Y485 3027 aa6.21□□□□□ -1.42
GFRA1-203ENST00000369236 TNRC18O15417 2968 aaPredicted RBP6.2□□□□□ -1.42
GFRA1-203ENST00000369236 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
GFRA1-203ENST00000369236 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
GFRA1-203ENST00000369236 DCHS2Q6V1P9 2916 aa6.17□□□□□ -1.42
GFRA1-203ENST00000369236 BOD1L1Q8NFC6 3051 aa6.16□□□□□ -1.42
GFRA1-203ENST00000369236 COL6A3P12111 3177 aa6.15□□□□□ -1.42
GFRA1-203ENST00000369236 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
GFRA1-203ENST00000369236 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
GFRA1-203ENST00000369236 CELSR1Q9NYQ6 3014 aa6.11□□□□□ -1.43
GFRA1-203ENST00000369236 ATMQ13315 3056 aa6.09□□□□□ -1.43
GFRA1-203ENST00000369236 HTTP42858 3142 aa6.08□□□□□ -1.44
GFRA1-203ENST00000369236 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
GFRA1-203ENST00000369236 FBN2P35556 2912 aa6.07□□□□□ -1.44
GFRA1-203ENST00000369236 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
GFRA1-203ENST00000369236 ADGRG4Q8IZF6 3080 aa6.05□□□□□ -1.44
GFRA1-203ENST00000369236 MXRA5Q9NR99 2828 aa6.05□□□□□ -1.44
GFRA1-203ENST00000369236 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
GFRA1-203ENST00000369236 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
GFRA1-203ENST00000369236 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
GFRA1-203ENST00000369236 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
GFRA1-203ENST00000369236 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
GFRA1-203ENST00000369236 LAMA3Q16787 3333 aa5.98□□□□□ -1.45
GFRA1-203ENST00000369236 TENM4Q6N022 2769 aa5.98□□□□□ -1.45
GFRA1-203ENST00000369236 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
GFRA1-203ENST00000369236 BRCA2P51587 3418 aa5.93□□□□□ -1.46
GFRA1-203ENST00000369236 VWFP04275 2813 aa5.93□□□□□ -1.46
GFRA1-203ENST00000369236 VCANP13611 3396 aa5.93□□□□□ -1.46
GFRA1-203ENST00000369236 CFAP47Q6ZTR5 3102 aa5.92□□□□□ -1.46
GFRA1-203ENST00000369236 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
GFRA1-203ENST00000369236 TENM2Q9NT68 2774 aa5.89□□□□□ -1.47
GFRA1-203ENST00000369236 CDH23Q9H251 3354 aa5.87□□□□□ -1.47
GFRA1-203ENST00000369236 SPEGQ15772 3267 aa5.83□□□□□ -1.48
GFRA1-203ENST00000369236 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
GFRA1-203ENST00000369236 SPTBN5Q9NRC6 3674 aaKnown RBP5.76□□□□□ -1.49
GFRA1-203ENST00000369236 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
GFRA1-203ENST00000369236 WDFY3Q8IZQ1 3526 aa5.74□□□□□ -1.49
GFRA1-203ENST00000369236 ZFHX4Q86UP3 3567 aa5.72□□□□□ -1.49
GFRA1-203ENST00000369236 NBPF19A0A087WUL8 3843 aa5.67□□□□□ -1.5
GFRA1-203ENST00000369236 KRTAP21-3Q3LHN1 58 aa5.63□□□□□ -1.51
GFRA1-203ENST00000369236 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
GFRA1-203ENST00000369236 LAMA5O15230 3695 aa5.61□□□□□ -1.51
GFRA1-203ENST00000369236 SZT2Q5T011 3432 aa5.61□□□□□ -1.51
GFRA1-203ENST00000369236 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
GFRA1-203ENST00000369236 SMG1Q96Q15 3661 aaKnown RBP5.59□□□□□ -1.51
GFRA1-203ENST00000369236 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
GFRA1-203ENST00000369236 MYO15AQ9UKN7 3530 aa5.57□□□□□ -1.52
GFRA1-203ENST00000369236 LOC400499M0QZD8 3231 aa5.55□□□□□ -1.52
GFRA1-203ENST00000369236 DMDP11532 3685 aa5.55□□□□□ -1.52
GFRA1-203ENST00000369236 ASPMQ8IZT6 3477 aa5.55□□□□□ -1.52
GFRA1-203ENST00000369236 FBN3Q75N90 2809 aa5.54□□□□□ -1.52
GFRA1-203ENST00000369236 SPENQ96T58 3664 aaKnown RBP5.54□□□□□ -1.52
GFRA1-203ENST00000369236 EYSQ5T1H1 3165 aa5.52□□□□□ -1.53
GFRA1-203ENST00000369236 OTOGQ6ZRI0 2925 aa5.52□□□□□ -1.53
GFRA1-203ENST00000369236 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
GFRA1-203ENST00000369236 CSMD1Q96PZ7 3565 aa5.49□□□□□ -1.53
GFRA1-203ENST00000369236 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.54
GFRA1-203ENST00000369236 AKAP9Q99996 3911 aa5.45□□□□□ -1.54
GFRA1-203ENST00000369236 DCHS1Q96JQ0 3298 aa5.45□□□□□ -1.54
GFRA1-203ENST00000369236 RELNP78509 3460 aa5.44□□□□□ -1.54
GFRA1-203ENST00000369236 VPS13CQ709C8 3753 aa5.38□□□□□ -1.55
GFRA1-203ENST00000369236 FBN1P35555 2871 aaKnown RBP5.37□□□□□ -1.55
GFRA1-203ENST00000369236 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
GFRA1-203ENST00000369236 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
GFRA1-203ENST00000369236 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
GFRA1-203ENST00000369236 TRRAPQ9Y4A5 3859 aa5.25□□□□□ -1.57
GFRA1-203ENST00000369236 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
GFRA1-203ENST00000369236 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
GFRA1-203ENST00000369236 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
GFRA1-203ENST00000369236 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
GFRA1-203ENST00000369236 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
GFRA1-203ENST00000369236 CMYA5Q8N3K9 4069 aa5.08□□□□□ -1.6
GFRA1-203ENST00000369236 CUBNO60494 3623 aa5.06□□□□□ -1.6
GFRA1-203ENST00000369236 MUC3AQ02505 3323 aa5.03□□□□□ -1.6
GFRA1-203ENST00000369236 BSNQ9UPA5 3926 aa4.95□□□□□ -1.62
GFRA1-203ENST00000369236 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
GFRA1-203ENST00000369236 LYSTQ99698 3801 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms