RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CELSR2Q9HCU4 2923 aa6.1□□□□□ -1.43
PRDM1-201ENST00000369089 TYMSOSQ8TAI1 123 aa6.09□□□□□ -1.43
PRDM1-201ENST00000369089 NIPBLQ6KC79 2804 aaeCLIP6.08□□□□□ -1.44
PRDM1-201ENST00000369089 HRNRQ86YZ3 2850 aaPredicted RBP6.08□□□□□ -1.44
PRDM1-201ENST00000369089 STAB2Q8WWQ8 2551 aa6.06□□□□□ -1.44
PRDM1-201ENST00000369089 NF1P21359 2839 aa6.06□□□□□ -1.44
PRDM1-201ENST00000369089 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
PRDM1-201ENST00000369089 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
PRDM1-201ENST00000369089 CRYBG3Q68DQ2 2970 aa6.04□□□□□ -1.44
PRDM1-201ENST00000369089 KMT2BQ9UMN6 2715 aaPredicted RBP6.02□□□□□ -1.45
PRDM1-201ENST00000369089 DCHS2Q6V1P9 2916 aa6.02□□□□□ -1.45
PRDM1-201ENST00000369089 P0C880 135 aa6.01□□□□□ -1.45
PRDM1-201ENST00000369089 FBN2P35556 2912 aa6.01□□□□□ -1.45
PRDM1-201ENST00000369089 Q6ZSA8 131 aa6.01□□□□□ -1.45
PRDM1-201ENST00000369089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
PRDM1-201ENST00000369089 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
PRDM1-201ENST00000369089 H0YAA0 97 aa5.98□□□□□ -1.45
PRDM1-201ENST00000369089 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
PRDM1-201ENST00000369089 TENM4Q6N022 2769 aa5.95□□□□□ -1.46
PRDM1-201ENST00000369089 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
PRDM1-201ENST00000369089 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
PRDM1-201ENST00000369089 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
PRDM1-201ENST00000369089 MXRA5Q9NR99 2828 aa5.91□□□□□ -1.46
PRDM1-201ENST00000369089 RELNP78509 3460 aa5.91□□□□□ -1.46
PRDM1-201ENST00000369089 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
PRDM1-201ENST00000369089 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.47
PRDM1-201ENST00000369089 WDFY3Q8IZQ1 3526 aa5.87□□□□□ -1.47
PRDM1-201ENST00000369089 DCHS1Q96JQ0 3298 aa5.87□□□□□ -1.47
PRDM1-201ENST00000369089 LAMA5O15230 3695 aa5.83□□□□□ -1.48
PRDM1-201ENST00000369089 J3QL48 77 aa5.82□□□□□ -1.48
PRDM1-201ENST00000369089 S4R3F8 94 aa5.82□□□□□ -1.48
PRDM1-201ENST00000369089 ASPMQ8IZT6 3477 aa5.8□□□□□ -1.48
PRDM1-201ENST00000369089 DMDP11532 3685 aa5.76□□□□□ -1.49
PRDM1-201ENST00000369089 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
PRDM1-201ENST00000369089 KRTAP10-1P60331 282 aa5.74□□□□□ -1.49
PRDM1-201ENST00000369089 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
PRDM1-201ENST00000369089 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
PRDM1-201ENST00000369089 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
PRDM1-201ENST00000369089 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
PRDM1-201ENST00000369089 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
PRDM1-201ENST00000369089 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
PRDM1-201ENST00000369089 CELSR1Q9NYQ6 3014 aa5.69□□□□□ -1.5
PRDM1-201ENST00000369089 R4GN34 69 aa5.69□□□□□ -1.5
PRDM1-201ENST00000369089 TENM3Q9P273 2699 aa5.68□□□□□ -1.5
PRDM1-201ENST00000369089 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
PRDM1-201ENST00000369089 M0QZ58 72 aa5.65□□□□□ -1.5
PRDM1-201ENST00000369089 PDZD2O15018 2839 aa5.64□□□□□ -1.51
PRDM1-201ENST00000369089 OTOGQ6ZRI0 2925 aa5.6□□□□□ -1.51
PRDM1-201ENST00000369089 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
PRDM1-201ENST00000369089 VWFP04275 2813 aa5.57□□□□□ -1.52
PRDM1-201ENST00000369089 FBN1P35555 2871 aaKnown RBP5.56□□□□□ -1.52
PRDM1-201ENST00000369089 Q5VSD8 79 aa5.56□□□□□ -1.52
PRDM1-201ENST00000369089 PKD1L1Q8TDX9 2849 aa5.55□□□□□ -1.52
PRDM1-201ENST00000369089 SMG1Q96Q15 3661 aaKnown RBP5.54□□□□□ -1.52
PRDM1-201ENST00000369089 ZFHX3Q15911 3703 aa5.53□□□□□ -1.52
PRDM1-201ENST00000369089 KRTAP21-3Q3LHN1 58 aa5.52□□□□□ -1.53
PRDM1-201ENST00000369089 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
PRDM1-201ENST00000369089 CSMD1Q96PZ7 3565 aa5.51□□□□□ -1.53
PRDM1-201ENST00000369089 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
PRDM1-201ENST00000369089 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
PRDM1-201ENST00000369089 TGP01266 2768 aa5.47□□□□□ -1.53
PRDM1-201ENST00000369089 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
PRDM1-201ENST00000369089 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
PRDM1-201ENST00000369089 SVEP1Q4LDE5 3571 aa5.43□□□□□ -1.54
PRDM1-201ENST00000369089 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
PRDM1-201ENST00000369089 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
PRDM1-201ENST00000369089 CSMD2Q7Z408 3487 aa5.37□□□□□ -1.55
PRDM1-201ENST00000369089 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
PRDM1-201ENST00000369089 CUBNO60494 3623 aa5.35□□□□□ -1.55
PRDM1-201ENST00000369089 TNP1P09430 55 aa5.35□□□□□ -1.55
PRDM1-201ENST00000369089 INE1O15225 51 aa5.32□□□□□ -1.56
PRDM1-201ENST00000369089 XP32Q5T750 250 aa5.3□□□□□ -1.56
PRDM1-201ENST00000369089 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
PRDM1-201ENST00000369089 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
PRDM1-201ENST00000369089 M0R2T5 61 aa5.28□□□□□ -1.56
PRDM1-201ENST00000369089 BSNQ9UPA5 3926 aa5.27□□□□□ -1.57
PRDM1-201ENST00000369089 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
PRDM1-201ENST00000369089 ANK3Q12955 4377 aaKnown RBP5.21□□□□□ -1.58
PRDM1-201ENST00000369089 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
PRDM1-201ENST00000369089 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
PRDM1-201ENST00000369089 TRRAPQ9Y4A5 3859 aa5.2□□□□□ -1.58
PRDM1-201ENST00000369089 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
PRDM1-201ENST00000369089 FBN3Q75N90 2809 aa5.18□□□□□ -1.58
PRDM1-201ENST00000369089 MEGF8Q7Z7M0 2845 aa5.07□□□□□ -1.6
PRDM1-201ENST00000369089 A0A1B0GVY2 172 aa5.07□□□□□ -1.6
PRDM1-201ENST00000369089 COL7A1Q02388 2944 aa5.03□□□□□ -1.6
PRDM1-201ENST00000369089 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
PRDM1-201ENST00000369089 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
PRDM1-201ENST00000369089 VPS13CQ709C8 3753 aa4.96□□□□□ -1.62
PRDM1-201ENST00000369089 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
PRDM1-201ENST00000369089 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
PRDM1-201ENST00000369089 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
PRDM1-201ENST00000369089 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
PRDM1-201ENST00000369089 AKAP9Q99996 3911 aa4.74□□□□□ -1.65
PRDM1-201ENST00000369089 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
PRDM1-201ENST00000369089 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
PRDM1-201ENST00000369089 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
PRDM1-201ENST00000369089 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
PRDM1-201ENST00000369089 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
PRDM1-201ENST00000369089 DNAH9Q9NYC9 4486 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms