RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 A8MU10 97 aa4.36□□□□□ -1.71
SSR2-202ENST00000368311 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
SSR2-202ENST00000368311 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
SSR2-202ENST00000368311 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
SSR2-202ENST00000368311 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
SSR2-202ENST00000368311 NBEAL1Q6ZS30 2694 aa4.29□□□□□ -1.72
SSR2-202ENST00000368311 TNP1P09430 55 aa4.29□□□□□ -1.72
SSR2-202ENST00000368311 HUWE1Q7Z6Z7 4374 aaKnown RBP4.29□□□□□ -1.72
SSR2-202ENST00000368311 NIPBLQ6KC79 2804 aaeCLIP4.28□□□□□ -1.72
SSR2-202ENST00000368311 MT1HL1P0DM35 61 aa4.27□□□□□ -1.73
SSR2-202ENST00000368311 UNC80Q8N2C7 3258 aa4.27□□□□□ -1.73
SSR2-202ENST00000368311 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
SSR2-202ENST00000368311 H0YAA0 97 aa4.25□□□□□ -1.73
SSR2-202ENST00000368311 MYO15AQ9UKN7 3530 aa4.24□□□□□ -1.73
SSR2-202ENST00000368311 FBN3Q75N90 2809 aa4.24□□□□□ -1.73
SSR2-202ENST00000368311 ANK3Q12955 4377 aaKnown RBP4.23□□□□□ -1.73
SSR2-202ENST00000368311 COL6A3P12111 3177 aa4.23□□□□□ -1.73
SSR2-202ENST00000368311 LAMA1P25391 3075 aa4.21□□□□□ -1.74
SSR2-202ENST00000368311 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.74
SSR2-202ENST00000368311 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
SSR2-202ENST00000368311 WDFY4Q6ZS81 3184 aa4.2□□□□□ -1.74
SSR2-202ENST00000368311 TRIOO75962 3097 aa4.2□□□□□ -1.74
SSR2-202ENST00000368311 DNAH14Q0VDD8 3507 aa4.19□□□□□ -1.74
SSR2-202ENST00000368311 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
SSR2-202ENST00000368311 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
SSR2-202ENST00000368311 OTOGQ6ZRI0 2925 aa4.18□□□□□ -1.74
SSR2-202ENST00000368311 MXRA5Q9NR99 2828 aa4.17□□□□□ -1.74
SSR2-202ENST00000368311 BSNQ9UPA5 3926 aa4.17□□□□□ -1.74
SSR2-202ENST00000368311 LRBAP50851 2863 aa4.17□□□□□ -1.74
SSR2-202ENST00000368311 FBN2P35556 2912 aa4.16□□□□□ -1.74
SSR2-202ENST00000368311 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
SSR2-202ENST00000368311 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
SSR2-202ENST00000368311 DMXL1Q9Y485 3027 aa4.14□□□□□ -1.75
SSR2-202ENST00000368311 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
SSR2-202ENST00000368311 DMXL2Q8TDJ6 3036 aa4.13□□□□□ -1.75
SSR2-202ENST00000368311 HRNRQ86YZ3 2850 aaPredicted RBP4.12□□□□□ -1.75
SSR2-202ENST00000368311 COL12A1Q99715 3063 aa4.1□□□□□ -1.75
SSR2-202ENST00000368311 TENM2Q9NT68 2774 aa4.1□□□□□ -1.75
SSR2-202ENST00000368311 VPS13AQ96RL7 3174 aa4.1□□□□□ -1.75
SSR2-202ENST00000368311 FRYQ5TBA9 3013 aa4.1□□□□□ -1.75
SSR2-202ENST00000368311 DMDP11532 3685 aa4.09□□□□□ -1.75
SSR2-202ENST00000368311 ATMQ13315 3056 aa4.08□□□□□ -1.76
SSR2-202ENST00000368311 FRYLO94915 3013 aa4.08□□□□□ -1.76
SSR2-202ENST00000368311 KALRNO60229 2985 aa4.07□□□□□ -1.76
SSR2-202ENST00000368311 VCANP13611 3396 aa4.07□□□□□ -1.76
SSR2-202ENST00000368311 KRTAP4-5Q9BYR2 181 aa4.07□□□□□ -1.76
SSR2-202ENST00000368311 DNAH1Q9P2D7 4330 aa4.06□□□□□ -1.76
SSR2-202ENST00000368311 FLG2Q5D862 2391 aaPredicted RBP4.05□□□□□ -1.76
SSR2-202ENST00000368311 NBEAL2Q6ZNJ1 2754 aa3.99□□□□□ -1.77
SSR2-202ENST00000368311 ZFHX4Q86UP3 3567 aa3.99□□□□□ -1.77
SSR2-202ENST00000368311 P0C880 135 aa3.98□□□□□ -1.77
SSR2-202ENST00000368311 AKAP9Q99996 3911 aa3.98□□□□□ -1.77
SSR2-202ENST00000368311 FREM2Q5SZK8 3169 aa3.97□□□□□ -1.77
SSR2-202ENST00000368311 CELSR3Q9NYQ7 3312 aa3.97□□□□□ -1.77
SSR2-202ENST00000368311 CELSR2Q9HCU4 2923 aa3.97□□□□□ -1.77
SSR2-202ENST00000368311 NF1P21359 2839 aa3.97□□□□□ -1.77
SSR2-202ENST00000368311 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.78
SSR2-202ENST00000368311 SPENQ96T58 3664 aaKnown RBP3.95□□□□□ -1.78
SSR2-202ENST00000368311 TENM3Q9P273 2699 aa3.95□□□□□ -1.78
SSR2-202ENST00000368311 BOD1L1Q8NFC6 3051 aa3.95□□□□□ -1.78
SSR2-202ENST00000368311 DNAH11Q96DT5 4516 aa3.95□□□□□ -1.78
SSR2-202ENST00000368311 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
SSR2-202ENST00000368311 TACC2O95359 2948 aa3.93□□□□□ -1.78
SSR2-202ENST00000368311 ZZEF1O43149 2961 aa3.93□□□□□ -1.78
SSR2-202ENST00000368311 CRYBG3Q68DQ2 2970 aa3.93□□□□□ -1.78
SSR2-202ENST00000368311 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
SSR2-202ENST00000368311 DCHS1Q96JQ0 3298 aa3.9□□□□□ -1.78
SSR2-202ENST00000368311 FBN1P35555 2871 aaKnown RBP3.89□□□□□ -1.79
SSR2-202ENST00000368311 TENM1Q9UKZ4 2725 aa3.89□□□□□ -1.79
SSR2-202ENST00000368311 DYNC2H1Q8NCM8 4307 aaKnown RBP3.87□□□□□ -1.79
SSR2-202ENST00000368311 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
SSR2-202ENST00000368311 DNAH9Q9NYC9 4486 aa3.86□□□□□ -1.79
SSR2-202ENST00000368311 LOC400499M0QZD8 3231 aa3.86□□□□□ -1.79
SSR2-202ENST00000368311 ZANQ9Y493 2812 aa3.86□□□□□ -1.79
SSR2-202ENST00000368311 SPEGQ15772 3267 aa3.85□□□□□ -1.79
SSR2-202ENST00000368311 ANK2Q01484 3957 aa3.85□□□□□ -1.79
SSR2-202ENST00000368311 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
SSR2-202ENST00000368311 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
SSR2-202ENST00000368311 DNAH3Q8TD57 4116 aa3.83□□□□□ -1.8
SSR2-202ENST00000368311 DCHS2Q6V1P9 2916 aa3.82□□□□□ -1.8
SSR2-202ENST00000368311 ASPMQ8IZT6 3477 aa3.82□□□□□ -1.8
SSR2-202ENST00000368311 DYNC1H1Q14204 4646 aaKnown RBP3.82□□□□□ -1.8
SSR2-202ENST00000368311 RELNP78509 3460 aa3.82□□□□□ -1.8
SSR2-202ENST00000368311 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
SSR2-202ENST00000368311 VWFP04275 2813 aa3.81□□□□□ -1.8
SSR2-202ENST00000368311 NBPF19A0A087WUL8 3843 aa3.8□□□□□ -1.8
SSR2-202ENST00000368311 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
SSR2-202ENST00000368311 CFAP47Q6ZTR5 3102 aa3.8□□□□□ -1.8
SSR2-202ENST00000368311 LAMA5O15230 3695 aa3.79□□□□□ -1.8
SSR2-202ENST00000368311 HERC1Q15751 4861 aa3.79□□□□□ -1.8
SSR2-202ENST00000368311 CSMD2Q7Z408 3487 aa3.77□□□□□ -1.81
SSR2-202ENST00000368311 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
SSR2-202ENST00000368311 CMYA5Q8N3K9 4069 aa3.77□□□□□ -1.81
SSR2-202ENST00000368311 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
SSR2-202ENST00000368311 CSMD1Q96PZ7 3565 aa3.75□□□□□ -1.81
SSR2-202ENST00000368311 MT1HP80294 61 aa3.74□□□□□ -1.81
SSR2-202ENST00000368311 CELSR1Q9NYQ6 3014 aa3.73□□□□□ -1.81
SSR2-202ENST00000368311 LCE2DQ5TA82 110 aaPredicted RBP3.71□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
SSR2-202ENST00000368311 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms