RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 MRPL34Q9BQ48 92 aaKnown RBP13.44□□□□□ -0.26
R3HDM4-201ENST00000361574 KRTAP13-2Q52LG2 175 aa13.43□□□□□ -0.26
R3HDM4-201ENST00000361574 A0A087X002 238 aa13.42□□□□□ -0.26
R3HDM4-201ENST00000361574 SVIPQ8NHG7 77 aa13.42□□□□□ -0.26
R3HDM4-201ENST00000361574 KRTAP1-4P0C5Y4 121 aa13.4□□□□□ -0.26
R3HDM4-201ENST00000361574 C4orf26Q17RF5 130 aa13.4□□□□□ -0.26
R3HDM4-201ENST00000361574 LRP1BQ9NZR2 4599 aa13.38□□□□□ -0.27
R3HDM4-201ENST00000361574 NOTCH2NLQ7Z3S9 236 aa13.37□□□□□ -0.27
R3HDM4-201ENST00000361574 C8orf87E5RJ46 101 aa13.36□□□□□ -0.27
R3HDM4-201ENST00000361574 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
R3HDM4-201ENST00000361574 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
R3HDM4-201ENST00000361574 NDUFS5O43920 106 aa13.28□□□□□ -0.28
R3HDM4-201ENST00000361574 C1orf195Q5TG92 126 aa13.27□□□□□ -0.28
R3HDM4-201ENST00000361574 IGLV7-46A0A075B6I9 117 aa13.25□□□□□ -0.29
R3HDM4-201ENST00000361574 LIMD2Q9BT23 127 aa13.25□□□□□ -0.29
R3HDM4-201ENST00000361574 SACSQ9NZJ4 4579 aa13.24□□□□□ -0.29
R3HDM4-201ENST00000361574 PRR4Q16378 134 aa13.24□□□□□ -0.29
R3HDM4-201ENST00000361574 KRTAP13-3Q3SY46 172 aa13.24□□□□□ -0.29
R3HDM4-201ENST00000361574 A0A1B0GVY2 172 aa13.2□□□□□ -0.3
R3HDM4-201ENST00000361574 PLA2G1BP04054 148 aaKnown RBP13.2□□□□□ -0.3
R3HDM4-201ENST00000361574 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
R3HDM4-201ENST00000361574 LINC00313P59037 77 aa13.18□□□□□ -0.3
R3HDM4-201ENST00000361574 LOC101927531A0A1B0GV80 90 aa13.17□□□□□ -0.3
R3HDM4-201ENST00000361574 Q1T7F1 81 aa13.17□□□□□ -0.3
R3HDM4-201ENST00000361574 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
R3HDM4-201ENST00000361574 SPINK1P00995 79 aa13.15□□□□□ -0.3
R3HDM4-201ENST00000361574 Q5W150 140 aa13.14□□□□□ -0.31
R3HDM4-201ENST00000361574 TYMSOSQ8TAI1 123 aa13.14□□□□□ -0.31
R3HDM4-201ENST00000361574 RPS29P62273 56 aaKnown RBP13.13□□□□□ -0.31
R3HDM4-201ENST00000361574 MPLKIPQ8TAP9 179 aa13.11□□□□□ -0.31
R3HDM4-201ENST00000361574 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
R3HDM4-201ENST00000361574 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
R3HDM4-201ENST00000361574 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
R3HDM4-201ENST00000361574 FAM229AH3BQW9 127 aa13.07□□□□□ -0.32
R3HDM4-201ENST00000361574 PKHD1P08F94 4074 aa13.05□□□□□ -0.32
R3HDM4-201ENST00000361574 SPAG11AQ6PDA7 123 aa13.04□□□□□ -0.32
R3HDM4-201ENST00000361574 V9GYY9 64 aa13.04□□□□□ -0.32
R3HDM4-201ENST00000361574 KRTAP10-4P60372 401 aaPredicted RBP13.02□□□□□ -0.32
R3HDM4-201ENST00000361574 COA5Q86WW8 74 aa13.02□□□□□ -0.32
R3HDM4-201ENST00000361574 DYNC1H1Q14204 4646 aaKnown RBP13.02□□□□□ -0.32
R3HDM4-201ENST00000361574 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
R3HDM4-201ENST00000361574 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
R3HDM4-201ENST00000361574 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
R3HDM4-201ENST00000361574 IGKV2-30P06310 120 aa12.91□□□□□ -0.34
R3HDM4-201ENST00000361574 APOBP04114 4563 aaKnown RBP12.9□□□□□ -0.34
R3HDM4-201ENST00000361574 HRES1P13985 223 aa12.89□□□□□ -0.35
R3HDM4-201ENST00000361574 RYR2Q92736 4967 aa12.89□□□□□ -0.35
R3HDM4-201ENST00000361574 PRO0628Q9UI54 55 aa12.88□□□□□ -0.35
R3HDM4-201ENST00000361574 KMT2CQ8NEZ4 4911 aaKnown RBP12.84□□□□□ -0.35
R3HDM4-201ENST00000361574 PKHD1L1Q86WI1 4243 aa12.82□□□□□ -0.36
R3HDM4-201ENST00000361574 DMAC1Q96GE9 116 aa12.81□□□□□ -0.36
R3HDM4-201ENST00000361574 PSPHP1O15172 72 aa12.8□□□□□ -0.36
R3HDM4-201ENST00000361574 A8MUN3 132 aa12.78□□□□□ -0.36
R3HDM4-201ENST00000361574 ACYP2P14621 99 aa12.78□□□□□ -0.36
R3HDM4-201ENST00000361574 Q5VV11 94 aa12.76□□□□□ -0.37
R3HDM4-201ENST00000361574 RETNLBQ9BQ08 111 aa12.76□□□□□ -0.37
R3HDM4-201ENST00000361574 BRK1Q8WUW1 75 aa12.76□□□□□ -0.37
R3HDM4-201ENST00000361574 LINC01558Q9Y6Z2 57 aa12.74□□□□□ -0.37
R3HDM4-201ENST00000361574 FAT1Q14517 4588 aa12.72□□□□□ -0.37
R3HDM4-201ENST00000361574 Q75L30 129 aa12.67□□□□□ -0.38
R3HDM4-201ENST00000361574 PRR15LQ9BU68 103 aa12.67□□□□□ -0.38
R3HDM4-201ENST00000361574 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
R3HDM4-201ENST00000361574 IGKV2D-30A0A075B6S6 120 aa12.65□□□□□ -0.39
R3HDM4-201ENST00000361574 A8MUU9 505 aa12.65□□□□□ -0.39
R3HDM4-201ENST00000361574 RYR3Q15413 4870 aa12.64□□□□□ -0.39
R3HDM4-201ENST00000361574 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
R3HDM4-201ENST00000361574 CHKB-CPT1BH3BT56 60 aa12.56□□□□□ -0.4
R3HDM4-201ENST00000361574 KRTAP10-8P60410 259 aa12.53□□□□□ -0.4
R3HDM4-201ENST00000361574 C9orf92A6NGG3 77 aa12.5□□□□□ -0.41
R3HDM4-201ENST00000361574 FLG2Q5D862 2391 aaPredicted RBP12.48□□□□□ -0.41
R3HDM4-201ENST00000361574 Q5VSD8 79 aa12.47□□□□□ -0.41
R3HDM4-201ENST00000361574 Q8N1X5 172 aa12.46□□□□□ -0.42
R3HDM4-201ENST00000361574 HSPG2P98160 4391 aa12.41□□□□□ -0.42
R3HDM4-201ENST00000361574 A6NED7 52 aa12.4□□□□□ -0.42
R3HDM4-201ENST00000361574 TNXBP22105 4242 aa12.37□□□□□ -0.43
R3HDM4-201ENST00000361574 LCA10Q71F78 164 aa12.36□□□□□ -0.43
R3HDM4-201ENST00000361574 CDC42SE1Q9NRR8 79 aa12.36□□□□□ -0.43
R3HDM4-201ENST00000361574 A8MU10 97 aa12.32□□□□□ -0.44
R3HDM4-201ENST00000361574 SPINK7P58062 85 aa12.3□□□□□ -0.44
R3HDM4-201ENST00000361574 FAT3Q8TDW7 4589 aa12.29□□□□□ -0.44
R3HDM4-201ENST00000361574 RYR1P21817 5038 aa12.29□□□□□ -0.44
R3HDM4-201ENST00000361574 ATP11AUNQ6ZP68 121 aa12.26□□□□□ -0.45
R3HDM4-201ENST00000361574 A0A1B0GU69 56 aa12.25□□□□□ -0.45
R3HDM4-201ENST00000361574 KRTAP17-1Q9BYP8 105 aa12.25□□□□□ -0.45
R3HDM4-201ENST00000361574 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
R3HDM4-201ENST00000361574 KRTAP3-1Q9BYR8 98 aa12.21□□□□□ -0.46
R3HDM4-201ENST00000361574 EPPK1P58107 5090 aaKnown RBP12.2□□□□□ -0.46
R3HDM4-201ENST00000361574 SPTSSBQ8NFR3 76 aa12.18□□□□□ -0.46
R3HDM4-201ENST00000361574 MT1HL1P0DM35 61 aa12.17□□□□□ -0.46
R3HDM4-201ENST00000361574 RPL37P61927 97 aaKnown RBP12.15□□□□□ -0.46
R3HDM4-201ENST00000361574 COX6B2Q6YFQ2 88 aa12.11□□□□□ -0.47
R3HDM4-201ENST00000361574 PMAIP1Q13794 54 aa12.09□□□□□ -0.47
R3HDM4-201ENST00000361574 XP32Q5T750 250 aa12.09□□□□□ -0.47
R3HDM4-201ENST00000361574 SPATA8Q6RVD6 105 aa12.07□□□□□ -0.48
R3HDM4-201ENST00000361574 UQCR11O14957 56 aa12.04□□□□□ -0.48
R3HDM4-201ENST00000361574 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
R3HDM4-201ENST00000361574 A6NN06 94 aa12.01□□□□□ -0.49
R3HDM4-201ENST00000361574 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
R3HDM4-201ENST00000361574 SEC61GP60059 68 aa11.98□□□□□ -0.49
R3HDM4-201ENST00000361574 BIRC6Q9NR09 4857 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms