RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 Q96NJ1 140 aa12.19□□□□□ -0.46
CBWD3-201ENST00000360171 MOBPQ13875 183 aa12.18□□□□□ -0.46
CBWD3-201ENST00000360171 LRP1BQ9NZR2 4599 aa12.18□□□□□ -0.46
CBWD3-201ENST00000360171 DYNC1H1Q14204 4646 aaKnown RBP12.17□□□□□ -0.46
CBWD3-201ENST00000360171 TP53AIP1Q9HCN2 124 aa12.17□□□□□ -0.46
CBWD3-201ENST00000360171 RYR3Q15413 4870 aa12.16□□□□□ -0.46
CBWD3-201ENST00000360171 ZNF706Q9Y5V0 76 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-201ENST00000360171 IGLV9-49A0A0B4J1Y8 123 aa12.12□□□□□ -0.47
CBWD3-201ENST00000360171 PSPHP1O15172 72 aa12.12□□□□□ -0.47
CBWD3-201ENST00000360171 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
CBWD3-201ENST00000360171 IGLV7-46A0A075B6I9 117 aa12.11□□□□□ -0.47
CBWD3-201ENST00000360171 C8orf17Q9NRJ1 99 aa12.09□□□□□ -0.47
CBWD3-201ENST00000360171 ZNF861PO60384 105 aa12.09□□□□□ -0.47
CBWD3-201ENST00000360171 IGLV7-43P04211 117 aa12.08□□□□□ -0.48
CBWD3-201ENST00000360171 LIMD2Q9BT23 127 aa12.08□□□□□ -0.48
CBWD3-201ENST00000360171 Q8N9P0 234 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-201ENST00000360171 A8MUN3 132 aa12.06□□□□□ -0.48
CBWD3-201ENST00000360171 A0A1B0GVX0 72 aa12.05□□□□□ -0.48
CBWD3-201ENST00000360171 Q5VV11 94 aa12.03□□□□□ -0.48
CBWD3-201ENST00000360171 APOBP04114 4563 aaKnown RBP12.02□□□□□ -0.49
CBWD3-201ENST00000360171 COA5Q86WW8 74 aa12.01□□□□□ -0.49
CBWD3-201ENST00000360171 VPS13BQ7Z7G8 4022 aa11.99□□□□□ -0.49
CBWD3-201ENST00000360171 CDK2AP2O75956 126 aa11.98□□□□□ -0.49
CBWD3-201ENST00000360171 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
CBWD3-201ENST00000360171 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
CBWD3-201ENST00000360171 CD164Q04900 197 aa11.96□□□□□ -0.49
CBWD3-201ENST00000360171 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
CBWD3-201ENST00000360171 PCOTHQ58A44 107 aa11.94□□□□□ -0.5
CBWD3-201ENST00000360171 LOC101927531A0A1B0GV80 90 aa11.94□□□□□ -0.5
CBWD3-201ENST00000360171 SMR3BP02814 79 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-201ENST00000360171 NDUFS5O43920 106 aa11.91□□□□□ -0.5
CBWD3-201ENST00000360171 Q75L30 129 aa11.9□□□□□ -0.5
CBWD3-201ENST00000360171 PRR15LQ9BU68 103 aa11.9□□□□□ -0.5
CBWD3-201ENST00000360171 CHKB-CPT1BH3BT56 60 aa11.88□□□□□ -0.51
CBWD3-201ENST00000360171 A0A087X002 238 aa11.85□□□□□ -0.51
CBWD3-201ENST00000360171 NOTCH2NLQ7Z3S9 236 aa11.85□□□□□ -0.51
CBWD3-201ENST00000360171 FAT1Q14517 4588 aa11.84□□□□□ -0.51
CBWD3-201ENST00000360171 LINC01558Q9Y6Z2 57 aa11.83□□□□□ -0.52
CBWD3-201ENST00000360171 PMAIP1Q13794 54 aa11.81□□□□□ -0.52
CBWD3-201ENST00000360171 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-201ENST00000360171 KRTAP13-3Q3SY46 172 aa11.8□□□□□ -0.52
CBWD3-201ENST00000360171 KRTAP1-4P0C5Y4 121 aa11.79□□□□□ -0.52
CBWD3-201ENST00000360171 HRES1P13985 223 aa11.79□□□□□ -0.52
CBWD3-201ENST00000360171 C8orf87E5RJ46 101 aa11.77□□□□□ -0.53
CBWD3-201ENST00000360171 SSBP3-AS1Q7Z2R9 100 aa11.77□□□□□ -0.53
CBWD3-201ENST00000360171 A8MU10 97 aa11.76□□□□□ -0.53
CBWD3-201ENST00000360171 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
CBWD3-201ENST00000360171 KRTAP13-2Q52LG2 175 aa11.74□□□□□ -0.53
CBWD3-201ENST00000360171 A6NED7 52 aa11.72□□□□□ -0.53
CBWD3-201ENST00000360171 Q5W150 140 aa11.72□□□□□ -0.53
CBWD3-201ENST00000360171 HSPG2P98160 4391 aa11.72□□□□□ -0.53
CBWD3-201ENST00000360171 EPPK1P58107 5090 aaKnown RBP11.72□□□□□ -0.53
CBWD3-201ENST00000360171 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
CBWD3-201ENST00000360171 LCA10Q71F78 164 aa11.71□□□□□ -0.53
CBWD3-201ENST00000360171 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.54
CBWD3-201ENST00000360171 RYR1P21817 5038 aa11.7□□□□□ -0.54
CBWD3-201ENST00000360171 CDC42SE1Q9NRR8 79 aa11.69□□□□□ -0.54
CBWD3-201ENST00000360171 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
CBWD3-201ENST00000360171 PKHD1L1Q86WI1 4243 aa11.63□□□□□ -0.55
CBWD3-201ENST00000360171 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
CBWD3-201ENST00000360171 KIAA1109Q2LD37 5005 aa11.62□□□□□ -0.55
CBWD3-201ENST00000360171 FAM229AH3BQW9 127 aa11.62□□□□□ -0.55
CBWD3-201ENST00000360171 ACYP2P14621 99 aa11.62□□□□□ -0.55
CBWD3-201ENST00000360171 LINC00313P59037 77 aa11.6□□□□□ -0.55
CBWD3-201ENST00000360171 Q5VSD8 79 aa11.6□□□□□ -0.55
CBWD3-201ENST00000360171 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
CBWD3-201ENST00000360171 DMAC1Q96GE9 116 aa11.58□□□□□ -0.56
CBWD3-201ENST00000360171 SPTSSBQ8NFR3 76 aa11.57□□□□□ -0.56
CBWD3-201ENST00000360171 SEC61GP60059 68 aa11.57□□□□□ -0.56
CBWD3-201ENST00000360171 TYMSOSQ8TAI1 123 aa11.55□□□□□ -0.56
CBWD3-201ENST00000360171 KTN1-AS1Q86SY8 53 aa11.54□□□□□ -0.56
CBWD3-201ENST00000360171 A6NN06 94 aa11.53□□□□□ -0.56
CBWD3-201ENST00000360171 SPINK7P58062 85 aa11.51□□□□□ -0.57
CBWD3-201ENST00000360171 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
CBWD3-201ENST00000360171 KRTAP16-1A8MUX0 517 aa11.47□□□□□ -0.57
CBWD3-201ENST00000360171 Q8N1X5 172 aa11.45□□□□□ -0.58
CBWD3-201ENST00000360171 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
CBWD3-201ENST00000360171 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
CBWD3-201ENST00000360171 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
CBWD3-201ENST00000360171 SPINK1P00995 79 aa11.38□□□□□ -0.59
CBWD3-201ENST00000360171 RETNLBQ9BQ08 111 aa11.35□□□□□ -0.59
CBWD3-201ENST00000360171 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
CBWD3-201ENST00000360171 C7orf65Q6ZTY9 151 aa11.33□□□□□ -0.6
CBWD3-201ENST00000360171 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-201ENST00000360171 A0A1B0GU69 56 aa11.31□□□□□ -0.6
CBWD3-201ENST00000360171 TNXBP22105 4242 aa11.31□□□□□ -0.6
CBWD3-201ENST00000360171 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
CBWD3-201ENST00000360171 KRTAP10-8P60410 259 aa11.3□□□□□ -0.6
CBWD3-201ENST00000360171 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
CBWD3-201ENST00000360171 MYCBP2O75592 4640 aa11.26□□□□□ -0.61
CBWD3-201ENST00000360171 BIRC6Q9NR09 4857 aa11.25□□□□□ -0.61
CBWD3-201ENST00000360171 IGKV2D-30A0A075B6S6 120 aa11.24□□□□□ -0.61
CBWD3-201ENST00000360171 SPATA8Q6RVD6 105 aa11.23□□□□□ -0.61
CBWD3-201ENST00000360171 RBM12B-AS1Q9P1G2 102 aa11.23□□□□□ -0.61
CBWD3-201ENST00000360171 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
CBWD3-201ENST00000360171 UQCR11O14957 56 aa11.16□□□□□ -0.62
CBWD3-201ENST00000360171 HERC2O95714 4834 aa11.13□□□□□ -0.63
CBWD3-201ENST00000360171 MIR22HGQ0VDD5 57 aa11.11□□□□□ -0.63
CBWD3-201ENST00000360171 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
CBWD3-201ENST00000360171 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms