RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 H0Y9P7 68 aa10.69□□□□□ -0.7
PDLIM7-203ENST00000359895 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
PDLIM7-203ENST00000359895 PKHD1P08F94 4074 aa10.68□□□□□ -0.7
PDLIM7-203ENST00000359895 Q5XG85 94 aa10.67□□□□□ -0.7
PDLIM7-203ENST00000359895 OXTP01178 125 aa10.65□□□□□ -0.7
PDLIM7-203ENST00000359895 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
PDLIM7-203ENST00000359895 A0A1B0GVY2 172 aa10.65□□□□□ -0.71
PDLIM7-203ENST00000359895 LINC00208Q96KT6 92 aa10.65□□□□□ -0.71
PDLIM7-203ENST00000359895 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
PDLIM7-203ENST00000359895 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-203ENST00000359895 C8orf87E5RJ46 101 aa10.61□□□□□ -0.71
PDLIM7-203ENST00000359895 LIMD2Q9BT23 127 aa10.6□□□□□ -0.71
PDLIM7-203ENST00000359895 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
PDLIM7-203ENST00000359895 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
PDLIM7-203ENST00000359895 C1orf64Q8NEQ6 169 aa10.58□□□□□ -0.72
PDLIM7-203ENST00000359895 NDUFS5O43920 106 aa10.57□□□□□ -0.72
PDLIM7-203ENST00000359895 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
PDLIM7-203ENST00000359895 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
PDLIM7-203ENST00000359895 NOTCH2NLQ7Z3S9 236 aa10.56□□□□□ -0.72
PDLIM7-203ENST00000359895 C1orf195Q5TG92 126 aa10.55□□□□□ -0.72
PDLIM7-203ENST00000359895 LRP1BQ9NZR2 4599 aa10.54□□□□□ -0.72
PDLIM7-203ENST00000359895 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
PDLIM7-203ENST00000359895 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.72
PDLIM7-203ENST00000359895 SPINK1P00995 79 aa10.52□□□□□ -0.73
PDLIM7-203ENST00000359895 SPANXA2-OT1Q8N9U9 137 aa10.52□□□□□ -0.73
PDLIM7-203ENST00000359895 LINC00313P59037 77 aa10.5□□□□□ -0.73
PDLIM7-203ENST00000359895 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
PDLIM7-203ENST00000359895 VPS13BQ7Z7G8 4022 aa10.48□□□□□ -0.73
PDLIM7-203ENST00000359895 HERC2O95714 4834 aa10.47□□□□□ -0.73
PDLIM7-203ENST00000359895 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.74
PDLIM7-203ENST00000359895 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
PDLIM7-203ENST00000359895 KIAA1109Q2LD37 5005 aa10.45□□□□□ -0.74
PDLIM7-203ENST00000359895 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
PDLIM7-203ENST00000359895 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
PDLIM7-203ENST00000359895 APOBP04114 4563 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-203ENST00000359895 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
PDLIM7-203ENST00000359895 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.74
PDLIM7-203ENST00000359895 PRR4Q16378 134 aa10.4□□□□□ -0.74
PDLIM7-203ENST00000359895 RYR1P21817 5038 aa10.4□□□□□ -0.75
PDLIM7-203ENST00000359895 Q8N9P0 234 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-203ENST00000359895 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
PDLIM7-203ENST00000359895 KRTAP13-3Q3SY46 172 aa10.38□□□□□ -0.75
PDLIM7-203ENST00000359895 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
PDLIM7-203ENST00000359895 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
PDLIM7-203ENST00000359895 PCOTHQ58A44 107 aa10.35□□□□□ -0.75
PDLIM7-203ENST00000359895 KRTAP16-1A8MUX0 517 aa10.35□□□□□ -0.75
PDLIM7-203ENST00000359895 Q5W150 140 aa10.35□□□□□ -0.75
PDLIM7-203ENST00000359895 C4orf26Q17RF5 130 aa10.34□□□□□ -0.75
PDLIM7-203ENST00000359895 HSPG2P98160 4391 aa10.34□□□□□ -0.75
PDLIM7-203ENST00000359895 MPLKIPQ8TAP9 179 aa10.24□□□□□ -0.77
PDLIM7-203ENST00000359895 PCLOQ9Y6V0 5065 aa10.23□□□□□ -0.77
PDLIM7-203ENST00000359895 Q1T7F1 81 aa10.22□□□□□ -0.77
PDLIM7-203ENST00000359895 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
PDLIM7-203ENST00000359895 COA5Q86WW8 74 aa10.2□□□□□ -0.78
PDLIM7-203ENST00000359895 KRTAP17-1Q9BYP8 105 aa10.2□□□□□ -0.78
PDLIM7-203ENST00000359895 FAT1Q14517 4588 aa10.2□□□□□ -0.78
PDLIM7-203ENST00000359895 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
PDLIM7-203ENST00000359895 V9GYY9 64 aa10.18□□□□□ -0.78
PDLIM7-203ENST00000359895 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
PDLIM7-203ENST00000359895 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
PDLIM7-203ENST00000359895 HRES1P13985 223 aa10.12□□□□□ -0.79
PDLIM7-203ENST00000359895 Q5VSD8 79 aa10.12□□□□□ -0.79
PDLIM7-203ENST00000359895 Q8N1X5 172 aa10.09□□□□□ -0.79
PDLIM7-203ENST00000359895 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
PDLIM7-203ENST00000359895 ACYP2P14621 99 aa10.08□□□□□ -0.8
PDLIM7-203ENST00000359895 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
PDLIM7-203ENST00000359895 PRO0628Q9UI54 55 aa10.06□□□□□ -0.8
PDLIM7-203ENST00000359895 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
PDLIM7-203ENST00000359895 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
PDLIM7-203ENST00000359895 A8MUU9 505 aa10.05□□□□□ -0.8
PDLIM7-203ENST00000359895 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
PDLIM7-203ENST00000359895 C9orf92A6NGG3 77 aa10.02□□□□□ -0.81
PDLIM7-203ENST00000359895 C7orf65Q6ZTY9 151 aa10.01□□□□□ -0.81
PDLIM7-203ENST00000359895 PSPHP1O15172 72 aa9.98□□□□□ -0.81
PDLIM7-203ENST00000359895 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
PDLIM7-203ENST00000359895 A8MUN3 132 aa9.95□□□□□ -0.82
PDLIM7-203ENST00000359895 CHKB-CPT1BH3BT56 60 aa9.93□□□□□ -0.82
PDLIM7-203ENST00000359895 LINC01558Q9Y6Z2 57 aa9.93□□□□□ -0.82
PDLIM7-203ENST00000359895 PRR15LQ9BU68 103 aa9.92□□□□□ -0.82
PDLIM7-203ENST00000359895 Q75L30 129 aa9.9□□□□□ -0.82
PDLIM7-203ENST00000359895 Q5VV11 94 aa9.89□□□□□ -0.83
PDLIM7-203ENST00000359895 BRK1Q8WUW1 75 aa9.89□□□□□ -0.83
PDLIM7-203ENST00000359895 MYCBP2O75592 4640 aa9.88□□□□□ -0.83
PDLIM7-203ENST00000359895 TNXBP22105 4242 aa9.83□□□□□ -0.84
PDLIM7-203ENST00000359895 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
PDLIM7-203ENST00000359895 FAT3Q8TDW7 4589 aa9.81□□□□□ -0.84
PDLIM7-203ENST00000359895 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
PDLIM7-203ENST00000359895 SPINK7P58062 85 aa9.77□□□□□ -0.85
PDLIM7-203ENST00000359895 HERC1Q15751 4861 aa9.74□□□□□ -0.85
PDLIM7-203ENST00000359895 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
PDLIM7-203ENST00000359895 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
PDLIM7-203ENST00000359895 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
PDLIM7-203ENST00000359895 A6NED7 52 aa9.7□□□□□ -0.86
PDLIM7-203ENST00000359895 XP32Q5T750 250 aa9.67□□□□□ -0.86
PDLIM7-203ENST00000359895 SPTSSBQ8NFR3 76 aa9.67□□□□□ -0.86
PDLIM7-203ENST00000359895 A0A1B0GU69 56 aa9.65□□□□□ -0.86
PDLIM7-203ENST00000359895 J3QL48 77 aa9.63□□□□□ -0.87
PDLIM7-203ENST00000359895 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
PDLIM7-203ENST00000359895 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
PDLIM7-203ENST00000359895 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms