RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 MYO15AQ9UKN7 3530 aa5.78□□□□□ -1.48
FXR1-202ENST00000357559 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
FXR1-202ENST00000357559 WDFY3Q8IZQ1 3526 aa5.77□□□□□ -1.49
FXR1-202ENST00000357559 ZNF292O60281 2723 aa5.77□□□□□ -1.49
FXR1-202ENST00000357559 ASPMQ8IZT6 3477 aa5.76□□□□□ -1.49
FXR1-202ENST00000357559 P0C880 135 aa5.76□□□□□ -1.49
FXR1-202ENST00000357559 COL12A1Q99715 3063 aa5.76□□□□□ -1.49
FXR1-202ENST00000357559 KMT2BQ9UMN6 2715 aaPredicted RBP5.75□□□□□ -1.49
FXR1-202ENST00000357559 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
FXR1-202ENST00000357559 ATMQ13315 3056 aa5.73□□□□□ -1.49
FXR1-202ENST00000357559 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
FXR1-202ENST00000357559 Q6ZRN7 208 aaPredicted RBP5.72□□□□□ -1.49
FXR1-202ENST00000357559 KRTAP7-1Q8IUC3 87 aa5.72□□□□□ -1.49
FXR1-202ENST00000357559 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
FXR1-202ENST00000357559 UBR5O95071 2799 aaPredicted RBP5.7□□□□□ -1.5
FXR1-202ENST00000357559 UTP20O75691 2785 aaKnown RBP5.68□□□□□ -1.5
FXR1-202ENST00000357559 BOD1L1Q8NFC6 3051 aa5.68□□□□□ -1.5
FXR1-202ENST00000357559 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
FXR1-202ENST00000357559 DCHS1Q96JQ0 3298 aa5.65□□□□□ -1.5
FXR1-202ENST00000357559 ZZEF1O43149 2961 aa5.65□□□□□ -1.51
FXR1-202ENST00000357559 FRYLO94915 3013 aa5.65□□□□□ -1.51
FXR1-202ENST00000357559 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
FXR1-202ENST00000357559 ADGRG4Q8IZF6 3080 aa5.63□□□□□ -1.51
FXR1-202ENST00000357559 LOC400499M0QZD8 3231 aa5.63□□□□□ -1.51
FXR1-202ENST00000357559 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
FXR1-202ENST00000357559 ITPR1Q14643 2758 aa5.61□□□□□ -1.51
FXR1-202ENST00000357559 XP32Q5T750 250 aa5.6□□□□□ -1.51
FXR1-202ENST00000357559 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
FXR1-202ENST00000357559 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
FXR1-202ENST00000357559 H0YAA0 97 aa5.59□□□□□ -1.51
FXR1-202ENST00000357559 LAMA5O15230 3695 aa5.58□□□□□ -1.52
FXR1-202ENST00000357559 NBPF19A0A087WUL8 3843 aa5.58□□□□□ -1.52
FXR1-202ENST00000357559 CHD9Q3L8U1 2897 aa5.57□□□□□ -1.52
FXR1-202ENST00000357559 ZFHX4Q86UP3 3567 aa5.54□□□□□ -1.52
FXR1-202ENST00000357559 TACC2O95359 2948 aa5.53□□□□□ -1.52
FXR1-202ENST00000357559 TNRC18O15417 2968 aaPredicted RBP5.5□□□□□ -1.53
FXR1-202ENST00000357559 EYSQ5T1H1 3165 aa5.49□□□□□ -1.53
FXR1-202ENST00000357559 NBEAQ8NFP9 2946 aa5.49□□□□□ -1.53
FXR1-202ENST00000357559 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
FXR1-202ENST00000357559 CSMD1Q96PZ7 3565 aa5.48□□□□□ -1.53
FXR1-202ENST00000357559 CELSR2Q9HCU4 2923 aa5.44□□□□□ -1.54
FXR1-202ENST00000357559 CELSR1Q9NYQ6 3014 aa5.43□□□□□ -1.54
FXR1-202ENST00000357559 RELNP78509 3460 aa5.42□□□□□ -1.54
FXR1-202ENST00000357559 TENM1Q9UKZ4 2725 aa5.38□□□□□ -1.55
FXR1-202ENST00000357559 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
FXR1-202ENST00000357559 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
FXR1-202ENST00000357559 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
FXR1-202ENST00000357559 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
FXR1-202ENST00000357559 SMG1Q96Q15 3661 aaKnown RBP5.33□□□□□ -1.56
FXR1-202ENST00000357559 TGP01266 2768 aa5.3□□□□□ -1.56
FXR1-202ENST00000357559 DCHS2Q6V1P9 2916 aa5.29□□□□□ -1.56
FXR1-202ENST00000357559 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
FXR1-202ENST00000357559 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
FXR1-202ENST00000357559 NF1P21359 2839 aa5.27□□□□□ -1.57
FXR1-202ENST00000357559 DMDP11532 3685 aa5.26□□□□□ -1.57
FXR1-202ENST00000357559 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
FXR1-202ENST00000357559 FLNCQ14315 2725 aa5.23□□□□□ -1.57
FXR1-202ENST00000357559 TENM3Q9P273 2699 aa5.22□□□□□ -1.57
FXR1-202ENST00000357559 NIPBLQ6KC79 2804 aaeCLIP5.21□□□□□ -1.58
FXR1-202ENST00000357559 FBN2P35556 2912 aa5.19□□□□□ -1.58
FXR1-202ENST00000357559 ZANQ9Y493 2812 aa5.18□□□□□ -1.58
FXR1-202ENST00000357559 VWFP04275 2813 aa5.17□□□□□ -1.58
FXR1-202ENST00000357559 CUBNO60494 3623 aa5.16□□□□□ -1.58
FXR1-202ENST00000357559 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
FXR1-202ENST00000357559 TENM4Q6N022 2769 aa5.15□□□□□ -1.58
FXR1-202ENST00000357559 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
FXR1-202ENST00000357559 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
FXR1-202ENST00000357559 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
FXR1-202ENST00000357559 PDZD2O15018 2839 aa5.11□□□□□ -1.59
FXR1-202ENST00000357559 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
FXR1-202ENST00000357559 TENM2Q9NT68 2774 aa5.09□□□□□ -1.59
FXR1-202ENST00000357559 KRTAP12-1P59990 96 aa5.09□□□□□ -1.6
FXR1-202ENST00000357559 HRNRQ86YZ3 2850 aaPredicted RBP5.04□□□□□ -1.6
FXR1-202ENST00000357559 MXRA5Q9NR99 2828 aa5.03□□□□□ -1.6
FXR1-202ENST00000357559 VPS13CQ709C8 3753 aa4.96□□□□□ -1.61
FXR1-202ENST00000357559 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
FXR1-202ENST00000357559 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
FXR1-202ENST00000357559 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
FXR1-202ENST00000357559 CSMD2Q7Z408 3487 aa4.86□□□□□ -1.63
FXR1-202ENST00000357559 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
FXR1-202ENST00000357559 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
FXR1-202ENST00000357559 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
FXR1-202ENST00000357559 TRRAPQ9Y4A5 3859 aa4.82□□□□□ -1.64
FXR1-202ENST00000357559 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
FXR1-202ENST00000357559 INE1O15225 51 aa4.78□□□□□ -1.64
FXR1-202ENST00000357559 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
FXR1-202ENST00000357559 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
FXR1-202ENST00000357559 AKAP9Q99996 3911 aa4.7□□□□□ -1.66
FXR1-202ENST00000357559 BSNQ9UPA5 3926 aa4.7□□□□□ -1.66
FXR1-202ENST00000357559 FBN3Q75N90 2809 aa4.68□□□□□ -1.66
FXR1-202ENST00000357559 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
FXR1-202ENST00000357559 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
FXR1-202ENST00000357559 FBN1P35555 2871 aaKnown RBP4.63□□□□□ -1.67
FXR1-202ENST00000357559 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
FXR1-202ENST00000357559 ANK3Q12955 4377 aaKnown RBP4.57□□□□□ -1.68
FXR1-202ENST00000357559 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
FXR1-202ENST00000357559 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
FXR1-202ENST00000357559 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
FXR1-202ENST00000357559 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
FXR1-202ENST00000357559 HUWE1Q7Z6Z7 4374 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms