RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.18
RTFDC1-202ENST00000357348 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-202ENST00000357348 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
RTFDC1-202ENST00000357348 LIMD2Q9BT23 127 aa7.69□□□□□ -1.18
RTFDC1-202ENST00000357348 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
RTFDC1-202ENST00000357348 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
RTFDC1-202ENST00000357348 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
RTFDC1-202ENST00000357348 Q6ZSA8 131 aa7.66□□□□□ -1.18
RTFDC1-202ENST00000357348 IGLV7-46A0A075B6I9 117 aa7.66□□□□□ -1.18
RTFDC1-202ENST00000357348 SEC61GP60059 68 aa7.66□□□□□ -1.18
RTFDC1-202ENST00000357348 EPPK1P58107 5090 aaKnown RBP7.64□□□□□ -1.19
RTFDC1-202ENST00000357348 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
RTFDC1-202ENST00000357348 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
RTFDC1-202ENST00000357348 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
RTFDC1-202ENST00000357348 Q75L30 129 aa7.61□□□□□ -1.19
RTFDC1-202ENST00000357348 Q96NJ1 140 aa7.61□□□□□ -1.19
RTFDC1-202ENST00000357348 APOBP04114 4563 aaKnown RBP7.61□□□□□ -1.19
RTFDC1-202ENST00000357348 A8MU10 97 aa7.6□□□□□ -1.19
RTFDC1-202ENST00000357348 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
RTFDC1-202ENST00000357348 COA5Q86WW8 74 aa7.6□□□□□ -1.19
RTFDC1-202ENST00000357348 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
RTFDC1-202ENST00000357348 CHKB-CPT1BH3BT56 60 aa7.59□□□□□ -1.19
RTFDC1-202ENST00000357348 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
RTFDC1-202ENST00000357348 MOBPQ13875 183 aa7.58□□□□□ -1.2
RTFDC1-202ENST00000357348 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
RTFDC1-202ENST00000357348 FAT1Q14517 4588 aa7.56□□□□□ -1.2
RTFDC1-202ENST00000357348 CD164Q04900 197 aa7.55□□□□□ -1.2
RTFDC1-202ENST00000357348 LCA10Q71F78 164 aa7.54□□□□□ -1.2
RTFDC1-202ENST00000357348 C8orf17Q9NRJ1 99 aa7.54□□□□□ -1.2
RTFDC1-202ENST00000357348 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
RTFDC1-202ENST00000357348 LINC00483Q53H64 154 aa7.54□□□□□ -1.2
RTFDC1-202ENST00000357348 ATP11AUNQ6ZP68 121 aa7.54□□□□□ -1.2
RTFDC1-202ENST00000357348 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
RTFDC1-202ENST00000357348 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
RTFDC1-202ENST00000357348 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
RTFDC1-202ENST00000357348 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
RTFDC1-202ENST00000357348 CDC42SE1Q9NRR8 79 aa7.5□□□□□ -1.21
RTFDC1-202ENST00000357348 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
RTFDC1-202ENST00000357348 ZNF861PO60384 105 aa7.49□□□□□ -1.21
RTFDC1-202ENST00000357348 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
RTFDC1-202ENST00000357348 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
RTFDC1-202ENST00000357348 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
RTFDC1-202ENST00000357348 HSPG2P98160 4391 aa7.48□□□□□ -1.21
RTFDC1-202ENST00000357348 A6NED7 52 aa7.47□□□□□ -1.21
RTFDC1-202ENST00000357348 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
RTFDC1-202ENST00000357348 A6NN06 94 aa7.47□□□□□ -1.21
RTFDC1-202ENST00000357348 MRPL34Q9BQ48 92 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-202ENST00000357348 HRES1P13985 223 aa7.46□□□□□ -1.22
RTFDC1-202ENST00000357348 RYR1P21817 5038 aa7.46□□□□□ -1.22
RTFDC1-202ENST00000357348 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-202ENST00000357348 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
RTFDC1-202ENST00000357348 NDUFS5O43920 106 aa7.43□□□□□ -1.22
RTFDC1-202ENST00000357348 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
RTFDC1-202ENST00000357348 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
RTFDC1-202ENST00000357348 KRTAP13-3Q3SY46 172 aa7.41□□□□□ -1.22
RTFDC1-202ENST00000357348 CDK2AP2O75956 126 aa7.4□□□□□ -1.22
RTFDC1-202ENST00000357348 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.23
RTFDC1-202ENST00000357348 A0A087X002 238 aa7.39□□□□□ -1.23
RTFDC1-202ENST00000357348 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
RTFDC1-202ENST00000357348 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-202ENST00000357348 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
RTFDC1-202ENST00000357348 Q5VSD8 79 aa7.37□□□□□ -1.23
RTFDC1-202ENST00000357348 SPINK7P58062 85 aa7.36□□□□□ -1.23
RTFDC1-202ENST00000357348 Q5W150 140 aa7.34□□□□□ -1.23
RTFDC1-202ENST00000357348 RBM12B-AS1Q9P1G2 102 aa7.34□□□□□ -1.23
RTFDC1-202ENST00000357348 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-202ENST00000357348 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
RTFDC1-202ENST00000357348 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
RTFDC1-202ENST00000357348 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
RTFDC1-202ENST00000357348 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
RTFDC1-202ENST00000357348 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-202ENST00000357348 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
RTFDC1-202ENST00000357348 ACYP2P14621 99 aa7.29□□□□□ -1.24
RTFDC1-202ENST00000357348 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-202ENST00000357348 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
RTFDC1-202ENST00000357348 Q8N1X5 172 aa7.28□□□□□ -1.24
RTFDC1-202ENST00000357348 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
RTFDC1-202ENST00000357348 BIRC6Q9NR09 4857 aa7.27□□□□□ -1.24
RTFDC1-202ENST00000357348 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
RTFDC1-202ENST00000357348 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
RTFDC1-202ENST00000357348 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
RTFDC1-202ENST00000357348 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
RTFDC1-202ENST00000357348 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
RTFDC1-202ENST00000357348 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
RTFDC1-202ENST00000357348 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
RTFDC1-202ENST00000357348 LINC00313P59037 77 aa7.17□□□□□ -1.26
RTFDC1-202ENST00000357348 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
RTFDC1-202ENST00000357348 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
RTFDC1-202ENST00000357348 HERC2O95714 4834 aa7.15□□□□□ -1.26
RTFDC1-202ENST00000357348 A0A1B0GU69 56 aa7.13□□□□□ -1.27
RTFDC1-202ENST00000357348 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
RTFDC1-202ENST00000357348 TNXBP22105 4242 aa7.13□□□□□ -1.27
RTFDC1-202ENST00000357348 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
RTFDC1-202ENST00000357348 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
RTFDC1-202ENST00000357348 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
RTFDC1-202ENST00000357348 UQCR11O14957 56 aa7.07□□□□□ -1.28
RTFDC1-202ENST00000357348 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
RTFDC1-202ENST00000357348 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
RTFDC1-202ENST00000357348 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
RTFDC1-202ENST00000357348 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms