RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TNRC18O15417 2968 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC11-202ENST00000357207 FBN2P35556 2912 aa9.08□□□□□ -0.96
TRAPPC11-202ENST00000357207 S4R3F8 94 aa9.07□□□□□ -0.96
TRAPPC11-202ENST00000357207 A8MU10 97 aa9.06□□□□□ -0.96
TRAPPC11-202ENST00000357207 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
TRAPPC11-202ENST00000357207 DMXL1Q9Y485 3027 aa9.04□□□□□ -0.96
TRAPPC11-202ENST00000357207 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
TRAPPC11-202ENST00000357207 HRNRQ86YZ3 2850 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC11-202ENST00000357207 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
TRAPPC11-202ENST00000357207 ROMO1P60602 79 aa9.01□□□□□ -0.97
TRAPPC11-202ENST00000357207 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
TRAPPC11-202ENST00000357207 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC11-202ENST00000357207 R4GN34 69 aa8.92□□□□□ -0.98
TRAPPC11-202ENST00000357207 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
TRAPPC11-202ENST00000357207 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
TRAPPC11-202ENST00000357207 CRYBG3Q68DQ2 2970 aa8.89□□□□□ -0.99
TRAPPC11-202ENST00000357207 USP34Q70CQ2 3546 aa8.85□□□□□ -0.99
TRAPPC11-202ENST00000357207 MXRA5Q9NR99 2828 aa8.83□□□□□ -1
TRAPPC11-202ENST00000357207 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
TRAPPC11-202ENST00000357207 MYO15AQ9UKN7 3530 aa8.81□□□□□ -1
TRAPPC11-202ENST00000357207 KRTAP25-1Q3LHN0 102 aa8.81□□□□□ -1
TRAPPC11-202ENST00000357207 SPTBN5Q9NRC6 3674 aaKnown RBP8.8□□□□□ -1
TRAPPC11-202ENST00000357207 M0QZ58 72 aa8.77□□□□□ -1.01
TRAPPC11-202ENST00000357207 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
TRAPPC11-202ENST00000357207 A0A0A0MQY5 61 aa8.76□□□□□ -1.01
TRAPPC11-202ENST00000357207 Q5VSD8 79 aa8.76□□□□□ -1.01
TRAPPC11-202ENST00000357207 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
TRAPPC11-202ENST00000357207 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
TRAPPC11-202ENST00000357207 M0R2T5 61 aa8.65□□□□□ -1.03
TRAPPC11-202ENST00000357207 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
TRAPPC11-202ENST00000357207 TENM1Q9UKZ4 2725 aa8.59□□□□□ -1.03
TRAPPC11-202ENST00000357207 DCHS1Q96JQ0 3298 aa8.57□□□□□ -1.04
TRAPPC11-202ENST00000357207 A8MUU9 505 aa8.55□□□□□ -1.04
TRAPPC11-202ENST00000357207 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
TRAPPC11-202ENST00000357207 TGP01266 2768 aa8.52□□□□□ -1.05
TRAPPC11-202ENST00000357207 WDFY3Q8IZQ1 3526 aa8.52□□□□□ -1.05
TRAPPC11-202ENST00000357207 PDZD2O15018 2839 aa8.52□□□□□ -1.05
TRAPPC11-202ENST00000357207 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
TRAPPC11-202ENST00000357207 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
TRAPPC11-202ENST00000357207 RELNP78509 3460 aa8.5□□□□□ -1.05
TRAPPC11-202ENST00000357207 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
TRAPPC11-202ENST00000357207 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
TRAPPC11-202ENST00000357207 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
TRAPPC11-202ENST00000357207 H0YAA0 97 aa8.39□□□□□ -1.07
TRAPPC11-202ENST00000357207 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
TRAPPC11-202ENST00000357207 VWFP04275 2813 aa8.29□□□□□ -1.08
TRAPPC11-202ENST00000357207 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
TRAPPC11-202ENST00000357207 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
TRAPPC11-202ENST00000357207 ASPMQ8IZT6 3477 aa8.27□□□□□ -1.09
TRAPPC11-202ENST00000357207 ZFHX4Q86UP3 3567 aa8.27□□□□□ -1.09
TRAPPC11-202ENST00000357207 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
TRAPPC11-202ENST00000357207 FBN1P35555 2871 aaKnown RBP8.26□□□□□ -1.09
TRAPPC11-202ENST00000357207 LAMA5O15230 3695 aa8.22□□□□□ -1.09
TRAPPC11-202ENST00000357207 CSMD1Q96PZ7 3565 aa8.21□□□□□ -1.09
TRAPPC11-202ENST00000357207 DMDP11532 3685 aa8.21□□□□□ -1.09
TRAPPC11-202ENST00000357207 XP32Q5T750 250 aa8.18□□□□□ -1.1
TRAPPC11-202ENST00000357207 TNP1P09430 55 aa8.15□□□□□ -1.11
TRAPPC11-202ENST00000357207 P0C880 135 aa8.09□□□□□ -1.11
TRAPPC11-202ENST00000357207 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
TRAPPC11-202ENST00000357207 SMG1Q96Q15 3661 aaKnown RBP8.06□□□□□ -1.12
TRAPPC11-202ENST00000357207 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
TRAPPC11-202ENST00000357207 SRRM2Q9UQ35 2752 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-202ENST00000357207 FBN3Q75N90 2809 aa8.01□□□□□ -1.13
TRAPPC11-202ENST00000357207 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
TRAPPC11-202ENST00000357207 CUBNO60494 3623 aa7.96□□□□□ -1.13
TRAPPC11-202ENST00000357207 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
TRAPPC11-202ENST00000357207 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
TRAPPC11-202ENST00000357207 SVEP1Q4LDE5 3571 aa7.91□□□□□ -1.14
TRAPPC11-202ENST00000357207 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
TRAPPC11-202ENST00000357207 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
TRAPPC11-202ENST00000357207 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
TRAPPC11-202ENST00000357207 A0A1B0GVY2 172 aa7.78□□□□□ -1.16
TRAPPC11-202ENST00000357207 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
TRAPPC11-202ENST00000357207 NBPF19A0A087WUL8 3843 aa7.74□□□□□ -1.17
TRAPPC11-202ENST00000357207 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
TRAPPC11-202ENST00000357207 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
TRAPPC11-202ENST00000357207 CSMD2Q7Z408 3487 aa7.67□□□□□ -1.18
TRAPPC11-202ENST00000357207 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC11-202ENST00000357207 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
TRAPPC11-202ENST00000357207 TRRAPQ9Y4A5 3859 aa7.56□□□□□ -1.2
TRAPPC11-202ENST00000357207 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
TRAPPC11-202ENST00000357207 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
TRAPPC11-202ENST00000357207 ANK3Q12955 4377 aaKnown RBP7.48□□□□□ -1.21
TRAPPC11-202ENST00000357207 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
TRAPPC11-202ENST00000357207 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
TRAPPC11-202ENST00000357207 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
TRAPPC11-202ENST00000357207 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
TRAPPC11-202ENST00000357207 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
TRAPPC11-202ENST00000357207 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
TRAPPC11-202ENST00000357207 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
TRAPPC11-202ENST00000357207 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC11-202ENST00000357207 HUWE1Q7Z6Z7 4374 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-202ENST00000357207 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
TRAPPC11-202ENST00000357207 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC11-202ENST00000357207 INE1O15225 51 aa6.84□□□□□ -1.31
TRAPPC11-202ENST00000357207 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
TRAPPC11-202ENST00000357207 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC11-202ENST00000357207 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
TRAPPC11-202ENST00000357207 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
TRAPPC11-202ENST00000357207 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms