RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 DSCR10P59022 87 aa10.59□□□□□ -0.71
NPAS3-202ENST00000356141 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
NPAS3-202ENST00000356141 PRR4Q16378 134 aa10.58□□□□□ -0.72
NPAS3-202ENST00000356141 SPRR1BP22528 89 aa10.56□□□□□ -0.72
NPAS3-202ENST00000356141 WFDC13Q8IUB5 93 aa10.56□□□□□ -0.72
NPAS3-202ENST00000356141 IGLV8-61A0A075B6I0 122 aa10.53□□□□□ -0.72
NPAS3-202ENST00000356141 OCR1Q9BZK8 76 aa10.52□□□□□ -0.73
NPAS3-202ENST00000356141 LINC00313P59037 77 aa10.51□□□□□ -0.73
NPAS3-202ENST00000356141 SPINK6Q6UWN8 80 aa10.51□□□□□ -0.73
NPAS3-202ENST00000356141 LCE6AA0A183 80 aa10.5□□□□□ -0.73
NPAS3-202ENST00000356141 A0A087X002 238 aa10.48□□□□□ -0.73
NPAS3-202ENST00000356141 NDUFS5O43920 106 aa10.48□□□□□ -0.73
NPAS3-202ENST00000356141 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
NPAS3-202ENST00000356141 Q6ZSA8 131 aa10.48□□□□□ -0.73
NPAS3-202ENST00000356141 ZNF706Q9Y5V0 76 aaPredicted RBP10.48□□□□□ -0.73
NPAS3-202ENST00000356141 LINC00483Q53H64 154 aa10.46□□□□□ -0.74
NPAS3-202ENST00000356141 Q5VV11 94 aa10.44□□□□□ -0.74
NPAS3-202ENST00000356141 HCG22E2RYF7 251 aa10.43□□□□□ -0.74
NPAS3-202ENST00000356141 LCA10Q71F78 164 aa10.43□□□□□ -0.74
NPAS3-202ENST00000356141 LINC00472Q9H8W2 130 aa10.41□□□□□ -0.74
NPAS3-202ENST00000356141 APOBP04114 4563 aaKnown RBP10.4□□□□□ -0.74
NPAS3-202ENST00000356141 A6NN06 94 aa10.39□□□□□ -0.75
NPAS3-202ENST00000356141 A0A1B0GW54 56 aa10.38□□□□□ -0.75
NPAS3-202ENST00000356141 IGHV6-1A0A0B4J1U7 121 aa10.37□□□□□ -0.75
NPAS3-202ENST00000356141 KRTAP13-2Q52LG2 175 aa10.37□□□□□ -0.75
NPAS3-202ENST00000356141 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
NPAS3-202ENST00000356141 C7orf65Q6ZTY9 151 aa10.36□□□□□ -0.75
NPAS3-202ENST00000356141 PRR15LQ9BU68 103 aa10.36□□□□□ -0.75
NPAS3-202ENST00000356141 Q96NJ1 140 aa10.35□□□□□ -0.75
NPAS3-202ENST00000356141 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
NPAS3-202ENST00000356141 A6NED7 52 aa10.33□□□□□ -0.76
NPAS3-202ENST00000356141 PLA2G1BP04054 148 aaKnown RBP10.33□□□□□ -0.76
NPAS3-202ENST00000356141 A8MWP4 228 aa10.32□□□□□ -0.76
NPAS3-202ENST00000356141 MP68P56378 58 aa10.31□□□□□ -0.76
NPAS3-202ENST00000356141 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
NPAS3-202ENST00000356141 A0A1B0GVY2 172 aa10.29□□□□□ -0.76
NPAS3-202ENST00000356141 LINC01554Q52M75 96 aa10.29□□□□□ -0.76
NPAS3-202ENST00000356141 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
NPAS3-202ENST00000356141 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
NPAS3-202ENST00000356141 NDUFB1O75438 58 aa10.26□□□□□ -0.77
NPAS3-202ENST00000356141 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
NPAS3-202ENST00000356141 J3QL48 77 aa10.24□□□□□ -0.77
NPAS3-202ENST00000356141 CYP4F30PQ9H0H9 118 aa10.24□□□□□ -0.77
NPAS3-202ENST00000356141 Q8N9P0 234 aaPredicted RBP10.23□□□□□ -0.77
NPAS3-202ENST00000356141 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
NPAS3-202ENST00000356141 MMP24-AS1A0A0U1RRL7 71 aa10.23□□□□□ -0.77
NPAS3-202ENST00000356141 PRAC1Q96KF2 57 aa10.23□□□□□ -0.77
NPAS3-202ENST00000356141 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
NPAS3-202ENST00000356141 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
NPAS3-202ENST00000356141 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
NPAS3-202ENST00000356141 TYMSOSQ8TAI1 123 aa10.21□□□□□ -0.77
NPAS3-202ENST00000356141 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
NPAS3-202ENST00000356141 RETNLBQ9BQ08 111 aa10.19□□□□□ -0.78
NPAS3-202ENST00000356141 C8orf17Q9NRJ1 99 aa10.18□□□□□ -0.78
NPAS3-202ENST00000356141 A0A1B0GVX0 72 aa10.17□□□□□ -0.78
NPAS3-202ENST00000356141 SSBP3-AS1Q7Z2R9 100 aa10.17□□□□□ -0.78
NPAS3-202ENST00000356141 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
NPAS3-202ENST00000356141 HSPG2P98160 4391 aa10.13□□□□□ -0.79
NPAS3-202ENST00000356141 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
NPAS3-202ENST00000356141 H0Y9P7 68 aa10.12□□□□□ -0.79
NPAS3-202ENST00000356141 Q75L30 129 aa10.11□□□□□ -0.79
NPAS3-202ENST00000356141 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
NPAS3-202ENST00000356141 MYCBP2O75592 4640 aa10.09□□□□□ -0.79
NPAS3-202ENST00000356141 PKHD1L1Q86WI1 4243 aa10.08□□□□□ -0.8
NPAS3-202ENST00000356141 PCOTHQ58A44 107 aa10.06□□□□□ -0.8
NPAS3-202ENST00000356141 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-202ENST00000356141 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
NPAS3-202ENST00000356141 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
NPAS3-202ENST00000356141 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
NPAS3-202ENST00000356141 LOC101927531A0A1B0GV80 90 aa10.03□□□□□ -0.8
NPAS3-202ENST00000356141 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
NPAS3-202ENST00000356141 RYR1P21817 5038 aa10.02□□□□□ -0.81
NPAS3-202ENST00000356141 SPAG11AQ6PDA7 123 aa10□□□□□ -0.81
NPAS3-202ENST00000356141 Q5W150 140 aa9.99□□□□□ -0.81
NPAS3-202ENST00000356141 SPINK7P58062 85 aa9.97□□□□□ -0.81
NPAS3-202ENST00000356141 Q5VSD8 79 aa9.97□□□□□ -0.81
NPAS3-202ENST00000356141 COA5Q86WW8 74 aa9.97□□□□□ -0.81
NPAS3-202ENST00000356141 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
NPAS3-202ENST00000356141 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
NPAS3-202ENST00000356141 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
NPAS3-202ENST00000356141 SPINK1P00995 79 aa9.92□□□□□ -0.82
NPAS3-202ENST00000356141 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
NPAS3-202ENST00000356141 BIRC6Q9NR09 4857 aa9.89□□□□□ -0.83
NPAS3-202ENST00000356141 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
NPAS3-202ENST00000356141 TNXBP22105 4242 aa9.85□□□□□ -0.83
NPAS3-202ENST00000356141 Q8N1X5 172 aa9.85□□□□□ -0.83
NPAS3-202ENST00000356141 TP53AIP1Q9HCN2 124 aa9.84□□□□□ -0.83
NPAS3-202ENST00000356141 FAT3Q8TDW7 4589 aa9.83□□□□□ -0.84
NPAS3-202ENST00000356141 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
NPAS3-202ENST00000356141 PCLOQ9Y6V0 5065 aa9.82□□□□□ -0.84
NPAS3-202ENST00000356141 KRTAP16-1A8MUX0 517 aa9.8□□□□□ -0.84
NPAS3-202ENST00000356141 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
NPAS3-202ENST00000356141 IGKV2D-30A0A075B6S6 120 aa9.79□□□□□ -0.84
NPAS3-202ENST00000356141 IGKV2-30P06310 120 aa9.79□□□□□ -0.84
NPAS3-202ENST00000356141 HERC2O95714 4834 aa9.74□□□□□ -0.85
NPAS3-202ENST00000356141 IGLV7-46A0A075B6I9 117 aa9.73□□□□□ -0.85
NPAS3-202ENST00000356141 H3BPC8 53 aa9.72□□□□□ -0.85
NPAS3-202ENST00000356141 KRTAP13-3Q3SY46 172 aa9.72□□□□□ -0.85
NPAS3-202ENST00000356141 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
NPAS3-202ENST00000356141 HRES1P13985 223 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms