RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 C1orf195Q5TG92 126 aa13.1□□□□□ -0.31
SCAMP3-202ENST00000355379 RYR1P21817 5038 aa13.09□□□□□ -0.31
SCAMP3-202ENST00000355379 C8orf17Q9NRJ1 99 aa13.08□□□□□ -0.31
SCAMP3-202ENST00000355379 IGHV6-1A0A0B4J1U7 121 aa13.06□□□□□ -0.32
SCAMP3-202ENST00000355379 hDV103S1A0JD37 113 aa13.04□□□□□ -0.32
SCAMP3-202ENST00000355379 C8orf87E5RJ46 101 aa13.01□□□□□ -0.33
SCAMP3-202ENST00000355379 Q8N1X5 172 aa13.01□□□□□ -0.33
SCAMP3-202ENST00000355379 KRTAP17-1Q9BYP8 105 aa12.98□□□□□ -0.33
SCAMP3-202ENST00000355379 TMEM254Q8TBM7 123 aa12.98□□□□□ -0.33
SCAMP3-202ENST00000355379 C20orf197Q8N268 126 aa12.96□□□□□ -0.33
SCAMP3-202ENST00000355379 NOTCH2NLQ7Z3S9 236 aa12.94□□□□□ -0.34
SCAMP3-202ENST00000355379 KRTAP10-8P60410 259 aa12.93□□□□□ -0.34
SCAMP3-202ENST00000355379 MRPL34Q9BQ48 92 aaKnown RBP12.93□□□□□ -0.34
SCAMP3-202ENST00000355379 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
SCAMP3-202ENST00000355379 C5orf47Q569G3 176 aa12.92□□□□□ -0.34
SCAMP3-202ENST00000355379 EPPK1P58107 5090 aaKnown RBP12.91□□□□□ -0.34
SCAMP3-202ENST00000355379 LINC00313P59037 77 aa12.89□□□□□ -0.35
SCAMP3-202ENST00000355379 TP53AIP1Q9HCN2 124 aa12.88□□□□□ -0.35
SCAMP3-202ENST00000355379 A0A0U1RQV1 116 aa12.87□□□□□ -0.35
SCAMP3-202ENST00000355379 CYSTM1Q9H1C7 97 aa12.86□□□□□ -0.35
SCAMP3-202ENST00000355379 KIAA1109Q2LD37 5005 aa12.86□□□□□ -0.35
SCAMP3-202ENST00000355379 SNURFQ9Y675 71 aa12.83□□□□□ -0.35
SCAMP3-202ENST00000355379 NDUFC1O43677 76 aa12.8□□□□□ -0.36
SCAMP3-202ENST00000355379 TNXBP22105 4242 aa12.8□□□□□ -0.36
SCAMP3-202ENST00000355379 NDUFS5O43920 106 aa12.79□□□□□ -0.36
SCAMP3-202ENST00000355379 MP68P56378 58 aa12.79□□□□□ -0.36
SCAMP3-202ENST00000355379 H3BPC8 53 aa12.78□□□□□ -0.36
SCAMP3-202ENST00000355379 FAT3Q8TDW7 4589 aa12.78□□□□□ -0.36
SCAMP3-202ENST00000355379 KRTAP16-1A8MUX0 517 aa12.78□□□□□ -0.36
SCAMP3-202ENST00000355379 H0Y9P7 68 aa12.77□□□□□ -0.37
SCAMP3-202ENST00000355379 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-202ENST00000355379 TRAV22A0A0B4J277 110 aa12.76□□□□□ -0.37
SCAMP3-202ENST00000355379 Q8N9P0 234 aaPredicted RBP12.76□□□□□ -0.37
SCAMP3-202ENST00000355379 H7BZZ5 65 aa12.74□□□□□ -0.37
SCAMP3-202ENST00000355379 TMEM258P61165 79 aa12.74□□□□□ -0.37
SCAMP3-202ENST00000355379 LRP1Q07954 4544 aaKnown RBP12.73□□□□□ -0.37
SCAMP3-202ENST00000355379 FLG2Q5D862 2391 aaPredicted RBP12.7□□□□□ -0.38
SCAMP3-202ENST00000355379 MT1HL1P0DM35 61 aa12.69□□□□□ -0.38
SCAMP3-202ENST00000355379 LINC00208Q96KT6 92 aa12.69□□□□□ -0.38
SCAMP3-202ENST00000355379 OXTP01178 125 aa12.68□□□□□ -0.38
SCAMP3-202ENST00000355379 RETNLBQ9BQ08 111 aa12.65□□□□□ -0.38
SCAMP3-202ENST00000355379 C1orf64Q8NEQ6 169 aa12.64□□□□□ -0.39
SCAMP3-202ENST00000355379 KRTAP13-3Q3SY46 172 aa12.62□□□□□ -0.39
SCAMP3-202ENST00000355379 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
SCAMP3-202ENST00000355379 KRTAP4-5Q9BYR2 181 aa12.6□□□□□ -0.39
SCAMP3-202ENST00000355379 Q5W150 140 aa12.59□□□□□ -0.39
SCAMP3-202ENST00000355379 FAM236DA0A1B0GTK5 79 aa12.57□□□□□ -0.4
SCAMP3-202ENST00000355379 FAM236CP0DP71 79 aa12.57□□□□□ -0.4
SCAMP3-202ENST00000355379 ATP5EP56381 51 aaPredicted RBP12.54□□□□□ -0.4
SCAMP3-202ENST00000355379 LOC101927531A0A1B0GV80 90 aa12.52□□□□□ -0.4
SCAMP3-202ENST00000355379 C9orf92A6NGG3 77 aa12.52□□□□□ -0.4
SCAMP3-202ENST00000355379 C20orf166-AS1Q96NR2 134 aa12.51□□□□□ -0.41
SCAMP3-202ENST00000355379 A8MUU9 505 aa12.5□□□□□ -0.41
SCAMP3-202ENST00000355379 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
SCAMP3-202ENST00000355379 MYCBP2O75592 4640 aa12.44□□□□□ -0.42
SCAMP3-202ENST00000355379 SPANXA2-OT1Q8N9U9 137 aa12.44□□□□□ -0.42
SCAMP3-202ENST00000355379 IGLV7-46A0A075B6I9 117 aa12.43□□□□□ -0.42
SCAMP3-202ENST00000355379 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
SCAMP3-202ENST00000355379 DMBT1Q9UGM3 2413 aaPredicted RBP12.41□□□□□ -0.42
SCAMP3-202ENST00000355379 IGKV2-30P06310 120 aa12.41□□□□□ -0.42
SCAMP3-202ENST00000355379 RPS28P62857 69 aaKnown RBP12.4□□□□□ -0.42
SCAMP3-202ENST00000355379 Q75L30 129 aa12.38□□□□□ -0.43
SCAMP3-202ENST00000355379 PCOTHQ58A44 107 aa12.37□□□□□ -0.43
SCAMP3-202ENST00000355379 HERC2O95714 4834 aa12.37□□□□□ -0.43
SCAMP3-202ENST00000355379 SERP1Q9Y6X1 66 aa12.35□□□□□ -0.43
SCAMP3-202ENST00000355379 PRR4Q16378 134 aa12.29□□□□□ -0.44
SCAMP3-202ENST00000355379 IGKV2D-30A0A075B6S6 120 aa12.25□□□□□ -0.45
SCAMP3-202ENST00000355379 J3QL48 77 aa12.24□□□□□ -0.45
SCAMP3-202ENST00000355379 XP32Q5T750 250 aa12.24□□□□□ -0.45
SCAMP3-202ENST00000355379 C7orf65Q6ZTY9 151 aa12.24□□□□□ -0.45
SCAMP3-202ENST00000355379 RPL37P61927 97 aaKnown RBP12.22□□□□□ -0.45
SCAMP3-202ENST00000355379 ABCA13Q86UQ4 5058 aa12.22□□□□□ -0.45
SCAMP3-202ENST00000355379 TPRXLQ17RH7 258 aa12.21□□□□□ -0.45
SCAMP3-202ENST00000355379 HRES1P13985 223 aa12.21□□□□□ -0.46
SCAMP3-202ENST00000355379 ATP11AUNQ6ZP68 121 aa12.16□□□□□ -0.46
SCAMP3-202ENST00000355379 SPINK7P58062 85 aa12.07□□□□□ -0.48
SCAMP3-202ENST00000355379 DMAC1Q96GE9 116 aa12.07□□□□□ -0.48
SCAMP3-202ENST00000355379 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
SCAMP3-202ENST00000355379 ACYP2P14621 99 aa12.02□□□□□ -0.48
SCAMP3-202ENST00000355379 COA5Q86WW8 74 aa12.02□□□□□ -0.48
SCAMP3-202ENST00000355379 A8MUN3 132 aa11.94□□□□□ -0.5
SCAMP3-202ENST00000355379 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
SCAMP3-202ENST00000355379 LPAP08519 4548 aa11.84□□□□□ -0.51
SCAMP3-202ENST00000355379 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
SCAMP3-202ENST00000355379 CHKB-CPT1BH3BT56 60 aa11.8□□□□□ -0.52
SCAMP3-202ENST00000355379 KRTAP3-1Q9BYR8 98 aa11.8□□□□□ -0.52
SCAMP3-202ENST00000355379 LRP2P98164 4655 aa11.79□□□□□ -0.52
SCAMP3-202ENST00000355379 SEC61BP60468 96 aaKnown RBP11.79□□□□□ -0.52
SCAMP3-202ENST00000355379 Q1T7F1 81 aa11.79□□□□□ -0.52
SCAMP3-202ENST00000355379 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
SCAMP3-202ENST00000355379 V9GYY9 64 aa11.76□□□□□ -0.53
SCAMP3-202ENST00000355379 PCLOQ9Y6V0 5065 aa11.71□□□□□ -0.53
SCAMP3-202ENST00000355379 MUC17Q685J3 4493 aa11.64□□□□□ -0.55
SCAMP3-202ENST00000355379 LINC01558Q9Y6Z2 57 aa11.62□□□□□ -0.55
SCAMP3-202ENST00000355379 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
SCAMP3-202ENST00000355379 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
SCAMP3-202ENST00000355379 PSPHP1O15172 72 aa11.5□□□□□ -0.57
SCAMP3-202ENST00000355379 H1FX-AS1Q4G0G2 97 aa11.5□□□□□ -0.57
SCAMP3-202ENST00000355379 PRR15LQ9BU68 103 aa11.49□□□□□ -0.57
SCAMP3-202ENST00000355379 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms