RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
VPS13B-201ENST00000355155 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
VPS13B-201ENST00000355155 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
VPS13B-201ENST00000355155 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
VPS13B-201ENST00000355155 C5orf47Q569G3 176 aa9.83□□□□□ -0.84
VPS13B-201ENST00000355155 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
VPS13B-201ENST00000355155 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
VPS13B-201ENST00000355155 RYR1P21817 5038 aa9.81□□□□□ -0.84
VPS13B-201ENST00000355155 CYSTM1Q9H1C7 97 aa9.81□□□□□ -0.84
VPS13B-201ENST00000355155 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
VPS13B-201ENST00000355155 NDUFC1O43677 76 aa9.8□□□□□ -0.84
VPS13B-201ENST00000355155 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
VPS13B-201ENST00000355155 TP53AIP1Q9HCN2 124 aa9.79□□□□□ -0.84
VPS13B-201ENST00000355155 H3BPC8 53 aa9.78□□□□□ -0.84
VPS13B-201ENST00000355155 IGHV6-1A0A0B4J1U7 121 aa9.78□□□□□ -0.84
VPS13B-201ENST00000355155 Q5VSD8 79 aa9.77□□□□□ -0.85
VPS13B-201ENST00000355155 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
VPS13B-201ENST00000355155 TMEM258P61165 79 aa9.77□□□□□ -0.85
VPS13B-201ENST00000355155 H7BZZ5 65 aa9.75□□□□□ -0.85
VPS13B-201ENST00000355155 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
VPS13B-201ENST00000355155 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
VPS13B-201ENST00000355155 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
VPS13B-201ENST00000355155 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.86
VPS13B-201ENST00000355155 Q8N1X5 172 aa9.7□□□□□ -0.86
VPS13B-201ENST00000355155 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-201ENST00000355155 TNXBP22105 4242 aa9.69□□□□□ -0.86
VPS13B-201ENST00000355155 LINC00313P59037 77 aa9.69□□□□□ -0.86
VPS13B-201ENST00000355155 SNURFQ9Y675 71 aa9.69□□□□□ -0.86
VPS13B-201ENST00000355155 MP68P56378 58 aa9.66□□□□□ -0.86
VPS13B-201ENST00000355155 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
VPS13B-201ENST00000355155 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.86
VPS13B-201ENST00000355155 H0Y9P7 68 aa9.64□□□□□ -0.87
VPS13B-201ENST00000355155 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
VPS13B-201ENST00000355155 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-201ENST00000355155 RPS28P62857 69 aaKnown RBP9.59□□□□□ -0.87
VPS13B-201ENST00000355155 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
VPS13B-201ENST00000355155 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
VPS13B-201ENST00000355155 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
VPS13B-201ENST00000355155 EPPK1P58107 5090 aaKnown RBP9.55□□□□□ -0.88
VPS13B-201ENST00000355155 C1orf64Q8NEQ6 169 aa9.55□□□□□ -0.88
VPS13B-201ENST00000355155 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
VPS13B-201ENST00000355155 SPANXA2-OT1Q8N9U9 137 aa9.53□□□□□ -0.88
VPS13B-201ENST00000355155 NDUFS5O43920 106 aa9.52□□□□□ -0.88
VPS13B-201ENST00000355155 Q5W150 140 aa9.51□□□□□ -0.89
VPS13B-201ENST00000355155 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-201ENST00000355155 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
VPS13B-201ENST00000355155 OXTP01178 125 aa9.5□□□□□ -0.89
VPS13B-201ENST00000355155 CYP4F30PQ9H0H9 118 aa9.5□□□□□ -0.89
VPS13B-201ENST00000355155 KIAA1109Q2LD37 5005 aa9.5□□□□□ -0.89
VPS13B-201ENST00000355155 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
VPS13B-201ENST00000355155 A8MUU9 505 aa9.47□□□□□ -0.89
VPS13B-201ENST00000355155 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.89
VPS13B-201ENST00000355155 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
VPS13B-201ENST00000355155 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-201ENST00000355155 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
VPS13B-201ENST00000355155 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
VPS13B-201ENST00000355155 Q75L30 129 aa9.37□□□□□ -0.91
VPS13B-201ENST00000355155 RETNLBQ9BQ08 111 aa9.36□□□□□ -0.91
VPS13B-201ENST00000355155 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
VPS13B-201ENST00000355155 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
VPS13B-201ENST00000355155 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
VPS13B-201ENST00000355155 PCOTHQ58A44 107 aa9.27□□□□□ -0.92
VPS13B-201ENST00000355155 HERC2O95714 4834 aa9.26□□□□□ -0.93
VPS13B-201ENST00000355155 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
VPS13B-201ENST00000355155 HRES1P13985 223 aa9.22□□□□□ -0.93
VPS13B-201ENST00000355155 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
VPS13B-201ENST00000355155 MYCBP2O75592 4640 aa9.22□□□□□ -0.93
VPS13B-201ENST00000355155 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.93
VPS13B-201ENST00000355155 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
VPS13B-201ENST00000355155 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
VPS13B-201ENST00000355155 XP32Q5T750 250 aa9.19□□□□□ -0.94
VPS13B-201ENST00000355155 PRR4Q16378 134 aa9.16□□□□□ -0.94
VPS13B-201ENST00000355155 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
VPS13B-201ENST00000355155 COA5Q86WW8 74 aa9.12□□□□□ -0.95
VPS13B-201ENST00000355155 ACYP2P14621 99 aa9.1□□□□□ -0.95
VPS13B-201ENST00000355155 A8MUN3 132 aa9.09□□□□□ -0.95
VPS13B-201ENST00000355155 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
VPS13B-201ENST00000355155 ABCA13Q86UQ4 5058 aa9.07□□□□□ -0.96
VPS13B-201ENST00000355155 Q1T7F1 81 aa9.06□□□□□ -0.96
VPS13B-201ENST00000355155 SPINK7P58062 85 aa9.06□□□□□ -0.96
VPS13B-201ENST00000355155 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-201ENST00000355155 V9GYY9 64 aa8.99□□□□□ -0.97
VPS13B-201ENST00000355155 J3QL48 77 aa8.98□□□□□ -0.97
VPS13B-201ENST00000355155 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
VPS13B-201ENST00000355155 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
VPS13B-201ENST00000355155 C4orf26Q17RF5 130 aa8.91□□□□□ -0.98
VPS13B-201ENST00000355155 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.98
VPS13B-201ENST00000355155 MUC17Q685J3 4493 aa8.9□□□□□ -0.98
VPS13B-201ENST00000355155 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
VPS13B-201ENST00000355155 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
VPS13B-201ENST00000355155 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
VPS13B-201ENST00000355155 LPAP08519 4548 aa8.78□□□□□ -1
VPS13B-201ENST00000355155 LRP2P98164 4655 aa8.77□□□□□ -1.01
VPS13B-201ENST00000355155 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
VPS13B-201ENST00000355155 Q5VV11 94 aa8.75□□□□□ -1.01
VPS13B-201ENST00000355155 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
VPS13B-201ENST00000355155 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
VPS13B-201ENST00000355155 PSPHP1O15172 72 aa8.67□□□□□ -1.02
VPS13B-201ENST00000355155 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
VPS13B-201ENST00000355155 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms