RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 COL6A5A8TX70 2615 aa5.74□□□□□ -1.49
COL11A1-201ENST00000353414 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
COL11A1-201ENST00000353414 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
COL11A1-201ENST00000353414 ZZEF1O43149 2961 aa5.73□□□□□ -1.49
COL11A1-201ENST00000353414 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
COL11A1-201ENST00000353414 SPRR1BP22528 89 aa5.72□□□□□ -1.49
COL11A1-201ENST00000353414 RELNP78509 3460 aa5.72□□□□□ -1.49
COL11A1-201ENST00000353414 CSMD1Q96PZ7 3565 aa5.72□□□□□ -1.49
COL11A1-201ENST00000353414 NBEAQ8NFP9 2946 aa5.7□□□□□ -1.5
COL11A1-201ENST00000353414 TACC2O95359 2948 aa5.69□□□□□ -1.5
COL11A1-201ENST00000353414 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
COL11A1-201ENST00000353414 SETXQ7Z333 2677 aaKnown RBP5.69□□□□□ -1.5
COL11A1-201ENST00000353414 NBEAL2Q6ZNJ1 2754 aa5.66□□□□□ -1.5
COL11A1-201ENST00000353414 ZNF292O60281 2723 aa5.64□□□□□ -1.51
COL11A1-201ENST00000353414 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
COL11A1-201ENST00000353414 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
COL11A1-201ENST00000353414 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
COL11A1-201ENST00000353414 MUC3AQ02505 3323 aa5.61□□□□□ -1.51
COL11A1-201ENST00000353414 ASB16-AS1Q495Z4 193 aa5.6□□□□□ -1.51
COL11A1-201ENST00000353414 ITPR2Q14571 2701 aa5.6□□□□□ -1.51
COL11A1-201ENST00000353414 A6NN06 94 aa5.59□□□□□ -1.51
COL11A1-201ENST00000353414 SPENQ96T58 3664 aaKnown RBP5.59□□□□□ -1.51
COL11A1-201ENST00000353414 TNP1P09430 55 aa5.57□□□□□ -1.52
COL11A1-201ENST00000353414 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
COL11A1-201ENST00000353414 KRTAP4-16G5E9R7 235 aaPredicted RBP5.56□□□□□ -1.52
COL11A1-201ENST00000353414 UTP20O75691 2785 aaKnown RBP5.56□□□□□ -1.52
COL11A1-201ENST00000353414 APCP25054 2843 aa5.54□□□□□ -1.52
COL11A1-201ENST00000353414 IGSF10Q6WRI0 2623 aa5.53□□□□□ -1.52
COL11A1-201ENST00000353414 SMG1Q96Q15 3661 aaKnown RBP5.53□□□□□ -1.52
COL11A1-201ENST00000353414 NOTCH1P46531 2555 aa5.52□□□□□ -1.53
COL11A1-201ENST00000353414 CUBNO60494 3623 aa5.52□□□□□ -1.53
COL11A1-201ENST00000353414 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
COL11A1-201ENST00000353414 SVEP1Q4LDE5 3571 aa5.5□□□□□ -1.53
COL11A1-201ENST00000353414 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
COL11A1-201ENST00000353414 ITPR1Q14643 2758 aa5.48□□□□□ -1.53
COL11A1-201ENST00000353414 KRTAP7-1Q8IUC3 87 aa5.48□□□□□ -1.53
COL11A1-201ENST00000353414 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
COL11A1-201ENST00000353414 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.53
COL11A1-201ENST00000353414 UBR5O95071 2799 aaPredicted RBP5.44□□□□□ -1.54
COL11A1-201ENST00000353414 NSD1Q96L73 2696 aaPredicted RBP5.44□□□□□ -1.54
COL11A1-201ENST00000353414 KMT2BQ9UMN6 2715 aaPredicted RBP5.44□□□□□ -1.54
COL11A1-201ENST00000353414 CELSR2Q9HCU4 2923 aa5.42□□□□□ -1.54
COL11A1-201ENST00000353414 HIVEP1P15822 2718 aa5.42□□□□□ -1.54
COL11A1-201ENST00000353414 ZFHX3Q15911 3703 aa5.39□□□□□ -1.55
COL11A1-201ENST00000353414 CSMD2Q7Z408 3487 aa5.34□□□□□ -1.55
COL11A1-201ENST00000353414 P0C880 135 aa5.34□□□□□ -1.55
COL11A1-201ENST00000353414 XP32Q5T750 250 aa5.34□□□□□ -1.55
COL11A1-201ENST00000353414 FBN2P35556 2912 aa5.32□□□□□ -1.56
COL11A1-201ENST00000353414 FLNCQ14315 2725 aa5.32□□□□□ -1.56
COL11A1-201ENST00000353414 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
COL11A1-201ENST00000353414 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
COL11A1-201ENST00000353414 DCHS2Q6V1P9 2916 aa5.29□□□□□ -1.56
COL11A1-201ENST00000353414 ZANQ9Y493 2812 aa5.26□□□□□ -1.57
COL11A1-201ENST00000353414 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
COL11A1-201ENST00000353414 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
COL11A1-201ENST00000353414 H0YAA0 97 aa5.21□□□□□ -1.58
COL11A1-201ENST00000353414 BSNQ9UPA5 3926 aa5.21□□□□□ -1.58
COL11A1-201ENST00000353414 HRNRQ86YZ3 2850 aaPredicted RBP5.2□□□□□ -1.58
COL11A1-201ENST00000353414 NIPBLQ6KC79 2804 aaeCLIP5.2□□□□□ -1.58
COL11A1-201ENST00000353414 TENM4Q6N022 2769 aa5.19□□□□□ -1.58
COL11A1-201ENST00000353414 VPS13CQ709C8 3753 aa5.18□□□□□ -1.58
COL11A1-201ENST00000353414 KRTAP1-4P0C5Y4 121 aa5.16□□□□□ -1.58
COL11A1-201ENST00000353414 TPRXLQ17RH7 258 aa5.15□□□□□ -1.59
COL11A1-201ENST00000353414 NF1P21359 2839 aa5.15□□□□□ -1.59
COL11A1-201ENST00000353414 TENM1Q9UKZ4 2725 aa5.13□□□□□ -1.59
COL11A1-201ENST00000353414 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
COL11A1-201ENST00000353414 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
COL11A1-201ENST00000353414 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
COL11A1-201ENST00000353414 VWFP04275 2813 aa5.02□□□□□ -1.61
COL11A1-201ENST00000353414 TENM2Q9NT68 2774 aa5.01□□□□□ -1.61
COL11A1-201ENST00000353414 KRTAP12-2P59991 146 aa5□□□□□ -1.61
COL11A1-201ENST00000353414 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
COL11A1-201ENST00000353414 TRRAPQ9Y4A5 3859 aa4.99□□□□□ -1.61
COL11A1-201ENST00000353414 ANK3Q12955 4377 aaKnown RBP4.96□□□□□ -1.62
COL11A1-201ENST00000353414 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
COL11A1-201ENST00000353414 TGP01266 2768 aa4.93□□□□□ -1.62
COL11A1-201ENST00000353414 AKAP9Q99996 3911 aa4.9□□□□□ -1.62
COL11A1-201ENST00000353414 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
COL11A1-201ENST00000353414 ZNF469Q96JG9 3925 aaPredicted RBP4.88□□□□□ -1.63
COL11A1-201ENST00000353414 PDZD2O15018 2839 aa4.87□□□□□ -1.63
COL11A1-201ENST00000353414 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
COL11A1-201ENST00000353414 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
COL11A1-201ENST00000353414 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
COL11A1-201ENST00000353414 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
COL11A1-201ENST00000353414 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
COL11A1-201ENST00000353414 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
COL11A1-201ENST00000353414 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
COL11A1-201ENST00000353414 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
COL11A1-201ENST00000353414 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
COL11A1-201ENST00000353414 MEGF8Q7Z7M0 2845 aa4.63□□□□□ -1.67
COL11A1-201ENST00000353414 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
COL11A1-201ENST00000353414 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
COL11A1-201ENST00000353414 INE1O15225 51 aa4.61□□□□□ -1.67
COL11A1-201ENST00000353414 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
COL11A1-201ENST00000353414 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
COL11A1-201ENST00000353414 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
COL11A1-201ENST00000353414 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
COL11A1-201ENST00000353414 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
COL11A1-201ENST00000353414 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
COL11A1-201ENST00000353414 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms