RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PRKDCP78527 4128 aaKnown RBP14.52□□□□□ -0.09
CPNE1-202ENST00000352393 LOC101927531A0A1B0GV80 90 aa14.5□□□□□ -0.09
CPNE1-202ENST00000352393 CHKB-CPT1BH3BT56 60 aa14.5□□□□□ -0.09
CPNE1-202ENST00000352393 A8MU10 97 aa14.48□□□□□ -0.09
CPNE1-202ENST00000352393 Q75L30 129 aa14.48□□□□□ -0.09
CPNE1-202ENST00000352393 FRAS1Q86XX4 4008 aa14.47□□□□□ -0.09
CPNE1-202ENST00000352393 DNAH2Q9P225 4427 aa14.46□□□□□ -0.09
CPNE1-202ENST00000352393 IGLV7-43P04211 117 aa14.42□□□□□ -0.1
CPNE1-202ENST00000352393 KRTAP21-3Q3LHN1 58 aa14.42□□□□□ -0.1
CPNE1-202ENST00000352393 HRES1P13985 223 aa14.41□□□□□ -0.1
CPNE1-202ENST00000352393 KRTAP13-3Q3SY46 172 aa14.41□□□□□ -0.1
CPNE1-202ENST00000352393 FBN3Q75N90 2809 aa14.4□□□□□ -0.1
CPNE1-202ENST00000352393 SPINK6Q6UWN8 80 aa14.39□□□□□ -0.11
CPNE1-202ENST00000352393 LINC01558Q9Y6Z2 57 aa14.38□□□□□ -0.11
CPNE1-202ENST00000352393 PMAIP1Q13794 54 aa14.36□□□□□ -0.11
CPNE1-202ENST00000352393 Q5W150 140 aa14.36□□□□□ -0.11
CPNE1-202ENST00000352393 KMT2AQ03164 3969 aa14.36□□□□□ -0.11
CPNE1-202ENST00000352393 CIRBP-AS1Q8TBR5 109 aa14.35□□□□□ -0.11
CPNE1-202ENST00000352393 SPAG11AQ6PDA7 123 aa14.33□□□□□ -0.11
CPNE1-202ENST00000352393 C1orf134Q5TEV5 83 aa14.32□□□□□ -0.12
CPNE1-202ENST00000352393 LCA10Q71F78 164 aa14.32□□□□□ -0.12
CPNE1-202ENST00000352393 A6NED7 52 aa14.31□□□□□ -0.12
CPNE1-202ENST00000352393 SSBP3-AS1Q7Z2R9 100 aa14.29□□□□□ -0.12
CPNE1-202ENST00000352393 C8orf87E5RJ46 101 aa14.28□□□□□ -0.12
CPNE1-202ENST00000352393 MEGF8Q7Z7M0 2845 aa14.28□□□□□ -0.12
CPNE1-202ENST00000352393 ALMS1Q8TCU4 4167 aa14.25□□□□□ -0.13
CPNE1-202ENST00000352393 CDC42SE1Q9NRR8 79 aa14.21□□□□□ -0.13
CPNE1-202ENST00000352393 ATP11AUNQ6ZP68 121 aa14.21□□□□□ -0.13
CPNE1-202ENST00000352393 TGP01266 2768 aa14.18□□□□□ -0.14
CPNE1-202ENST00000352393 SPTSSBQ8NFR3 76 aa14.17□□□□□ -0.14
CPNE1-202ENST00000352393 DNAH11Q96DT5 4516 aa14.16□□□□□ -0.14
CPNE1-202ENST00000352393 PRR26Q8N8Z3 221 aa14.14□□□□□ -0.15
CPNE1-202ENST00000352393 DNAH5Q8TE73 4624 aa14.13□□□□□ -0.15
CPNE1-202ENST00000352393 LINC00313P59037 77 aa14.13□□□□□ -0.15
CPNE1-202ENST00000352393 KRTAP10-2P60368 255 aa14.12□□□□□ -0.15
CPNE1-202ENST00000352393 DNAH6Q9C0G6 4158 aa14.11□□□□□ -0.15
CPNE1-202ENST00000352393 KRTAP13-2Q52LG2 175 aa14.11□□□□□ -0.15
CPNE1-202ENST00000352393 FAM229AH3BQW9 127 aa14.11□□□□□ -0.15
CPNE1-202ENST00000352393 ACYP2P14621 99 aa14.11□□□□□ -0.15
CPNE1-202ENST00000352393 SPINK7P58062 85 aa14.11□□□□□ -0.15
CPNE1-202ENST00000352393 LY6G6CO95867 125 aa14.1□□□□□ -0.15
CPNE1-202ENST00000352393 DMAC1Q96GE9 116 aa14.1□□□□□ -0.15
CPNE1-202ENST00000352393 SEC61GP60059 68 aa14.09□□□□□ -0.15
CPNE1-202ENST00000352393 A6NN06 94 aa14.06□□□□□ -0.16
CPNE1-202ENST00000352393 KTN1-AS1Q86SY8 53 aa14.03□□□□□ -0.16
CPNE1-202ENST00000352393 IGKV2-30P06310 120 aa14.03□□□□□ -0.16
CPNE1-202ENST00000352393 KRTAP16-1A8MUX0 517 aa14.02□□□□□ -0.17
CPNE1-202ENST00000352393 Q6ZSA8 131 aa14.02□□□□□ -0.17
CPNE1-202ENST00000352393 RETNLBQ9BQ08 111 aa13.99□□□□□ -0.17
CPNE1-202ENST00000352393 KRTAP10-1P60331 282 aa13.95□□□□□ -0.18
CPNE1-202ENST00000352393 KRTAP1-4P0C5Y4 121 aa13.94□□□□□ -0.18
CPNE1-202ENST00000352393 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
CPNE1-202ENST00000352393 PKD1P98161 4303 aa13.89□□□□□ -0.19
CPNE1-202ENST00000352393 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
CPNE1-202ENST00000352393 C7orf65Q6ZTY9 151 aa13.79□□□□□ -0.2
CPNE1-202ENST00000352393 A0A1B0GU69 56 aa13.78□□□□□ -0.2
CPNE1-202ENST00000352393 IGKV2D-30A0A075B6S6 120 aa13.78□□□□□ -0.2
CPNE1-202ENST00000352393 C4orf48Q5BLP8 95 aa13.71□□□□□ -0.21
CPNE1-202ENST00000352393 RBM12B-AS1Q9P1G2 102 aa13.71□□□□□ -0.21
CPNE1-202ENST00000352393 VPS13BQ7Z7G8 4022 aa13.71□□□□□ -0.21
CPNE1-202ENST00000352393 PLA2G1BP04054 148 aaKnown RBP13.7□□□□□ -0.22
CPNE1-202ENST00000352393 TYMSOSQ8TAI1 123 aa13.7□□□□□ -0.22
CPNE1-202ENST00000352393 SPINK1P00995 79 aa13.7□□□□□ -0.22
CPNE1-202ENST00000352393 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
CPNE1-202ENST00000352393 SPATA8Q6RVD6 105 aa13.65□□□□□ -0.22
CPNE1-202ENST00000352393 UQCR11O14957 56 aa13.56□□□□□ -0.24
CPNE1-202ENST00000352393 RPS29P62273 56 aaKnown RBP13.55□□□□□ -0.24
CPNE1-202ENST00000352393 MIR22HGQ0VDD5 57 aa13.54□□□□□ -0.24
CPNE1-202ENST00000352393 LINC00304Q8N9R0 145 aa13.53□□□□□ -0.24
CPNE1-202ENST00000352393 SACSQ9NZJ4 4579 aa13.51□□□□□ -0.25
CPNE1-202ENST00000352393 Q8N1X5 172 aa13.46□□□□□ -0.25
CPNE1-202ENST00000352393 PRAC1Q96KF2 57 aa13.37□□□□□ -0.27
CPNE1-202ENST00000352393 PKHD1P08F94 4074 aa13.36□□□□□ -0.27
CPNE1-202ENST00000352393 ADM2Q7Z4H4 148 aa13.34□□□□□ -0.27
CPNE1-202ENST00000352393 A8MUU9 505 aa13.33□□□□□ -0.28
CPNE1-202ENST00000352393 C20orf166-AS1Q96NR2 134 aa13.33□□□□□ -0.28
CPNE1-202ENST00000352393 PKHD1L1Q86WI1 4243 aa13.28□□□□□ -0.28
CPNE1-202ENST00000352393 C9orf92A6NGG3 77 aa13.27□□□□□ -0.28
CPNE1-202ENST00000352393 DYNC1H1Q14204 4646 aaKnown RBP13.25□□□□□ -0.29
CPNE1-202ENST00000352393 SMR3BP02814 79 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-202ENST00000352393 KRTAP10-4P60372 401 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-202ENST00000352393 KRTAP3-1Q9BYR8 98 aa13.2□□□□□ -0.3
CPNE1-202ENST00000352393 APOBP04114 4563 aaKnown RBP13.2□□□□□ -0.3
CPNE1-202ENST00000352393 A0A1B0GVY2 172 aa13.14□□□□□ -0.31
CPNE1-202ENST00000352393 H0YAA0 97 aa13.11□□□□□ -0.31
CPNE1-202ENST00000352393 FAT1Q14517 4588 aa13.09□□□□□ -0.31
CPNE1-202ENST00000352393 A0A1B0GU33 70 aa13□□□□□ -0.33
CPNE1-202ENST00000352393 LINC01554Q52M75 96 aa13□□□□□ -0.33
CPNE1-202ENST00000352393 RYR2Q92736 4967 aa12.99□□□□□ -0.33
CPNE1-202ENST00000352393 H1FX-AS1Q4G0G2 97 aa12.98□□□□□ -0.33
CPNE1-202ENST00000352393 CSAG1Q6PB30 78 aa12.97□□□□□ -0.33
CPNE1-202ENST00000352393 COX6B2Q6YFQ2 88 aa12.95□□□□□ -0.34
CPNE1-202ENST00000352393 KMT2CQ8NEZ4 4911 aaKnown RBP12.94□□□□□ -0.34
CPNE1-202ENST00000352393 FLG2Q5D862 2391 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-202ENST00000352393 FAT3Q8TDW7 4589 aa12.78□□□□□ -0.36
CPNE1-202ENST00000352393 RYR3Q15413 4870 aa12.77□□□□□ -0.36
CPNE1-202ENST00000352393 TNXBP22105 4242 aa12.69□□□□□ -0.38
CPNE1-202ENST00000352393 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
CPNE1-202ENST00000352393 RPL37P61927 97 aaKnown RBP12.64□□□□□ -0.39
CPNE1-202ENST00000352393 KRTAP3-3Q9BYR6 98 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms