RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 DSCR8Q96T75 97 aa6.74□□□□□ -1.33
CLCC1-202ENST00000348264 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
CLCC1-202ENST00000348264 A0A1B0GVX0 72 aa6.72□□□□□ -1.33
CLCC1-202ENST00000348264 M0R143 59 aa6.71□□□□□ -1.34
CLCC1-202ENST00000348264 C9JAW5 83 aa6.7□□□□□ -1.34
CLCC1-202ENST00000348264 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
CLCC1-202ENST00000348264 HRES1P13985 223 aa6.69□□□□□ -1.34
CLCC1-202ENST00000348264 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
CLCC1-202ENST00000348264 Q6ZQT0 140 aa6.68□□□□□ -1.34
CLCC1-202ENST00000348264 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
CLCC1-202ENST00000348264 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
CLCC1-202ENST00000348264 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
CLCC1-202ENST00000348264 J3KT08 172 aa6.66□□□□□ -1.34
CLCC1-202ENST00000348264 SMIM6P0DI80 62 aa6.66□□□□□ -1.34
CLCC1-202ENST00000348264 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
CLCC1-202ENST00000348264 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
CLCC1-202ENST00000348264 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
CLCC1-202ENST00000348264 JMJD7-PLA2G4BH0Y9G9 81 aa6.64□□□□□ -1.35
CLCC1-202ENST00000348264 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
CLCC1-202ENST00000348264 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
CLCC1-202ENST00000348264 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
CLCC1-202ENST00000348264 A8MWP4 228 aa6.6□□□□□ -1.35
CLCC1-202ENST00000348264 NDUFB1O75438 58 aa6.6□□□□□ -1.35
CLCC1-202ENST00000348264 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
CLCC1-202ENST00000348264 A0A1B0GW54 56 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 MT2AP02795 61 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 PDE6GP18545 87 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 BATFQ16520 125 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 LYRM7Q5U5X0 104 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
CLCC1-202ENST00000348264 USH2AO75445 5202 aa6.58□□□□□ -1.36
CLCC1-202ENST00000348264 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
CLCC1-202ENST00000348264 TSTD3H0UI37 97 aa6.57□□□□□ -1.36
CLCC1-202ENST00000348264 SSPOA2VEC9 5147 aa6.56□□□□□ -1.36
CLCC1-202ENST00000348264 SPINK7P58062 85 aa6.56□□□□□ -1.36
CLCC1-202ENST00000348264 MT1FP04733 61 aa6.54□□□□□ -1.36
CLCC1-202ENST00000348264 Q6ZVQ6 151 aa6.53□□□□□ -1.36
CLCC1-202ENST00000348264 PRR15Q8IV56 129 aa6.53□□□□□ -1.36
CLCC1-202ENST00000348264 NREPQ16612 68 aa6.52□□□□□ -1.37
CLCC1-202ENST00000348264 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
CLCC1-202ENST00000348264 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
CLCC1-202ENST00000348264 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
CLCC1-202ENST00000348264 H3BT86 120 aa6.5□□□□□ -1.37
CLCC1-202ENST00000348264 TAX1BP3O14907 124 aa6.5□□□□□ -1.37
CLCC1-202ENST00000348264 WFDC13Q8IUB5 93 aa6.5□□□□□ -1.37
CLCC1-202ENST00000348264 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
CLCC1-202ENST00000348264 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
CLCC1-202ENST00000348264 LOC105371267A0A1B0GV96 52 aa6.48□□□□□ -1.37
CLCC1-202ENST00000348264 K7EQZ3 153 aa6.48□□□□□ -1.37
CLCC1-202ENST00000348264 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
CLCC1-202ENST00000348264 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
CLCC1-202ENST00000348264 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
CLCC1-202ENST00000348264 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
CLCC1-202ENST00000348264 hDV103S1A0JD37 113 aa6.44□□□□□ -1.38
CLCC1-202ENST00000348264 BPY2O14599 106 aa6.41□□□□□ -1.38
CLCC1-202ENST00000348264 NDUFS5O43920 106 aa6.41□□□□□ -1.38
CLCC1-202ENST00000348264 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
CLCC1-202ENST00000348264 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
CLCC1-202ENST00000348264 FCGBPQ9Y6R7 5405 aaPredicted RBP6.39□□□□□ -1.39
CLCC1-202ENST00000348264 Q8N9L7 120 aa6.39□□□□□ -1.39
CLCC1-202ENST00000348264 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
CLCC1-202ENST00000348264 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
CLCC1-202ENST00000348264 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
CLCC1-202ENST00000348264 Q5W150 140 aa6.36□□□□□ -1.39
CLCC1-202ENST00000348264 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
CLCC1-202ENST00000348264 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
CLCC1-202ENST00000348264 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
CLCC1-202ENST00000348264 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
CLCC1-202ENST00000348264 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
CLCC1-202ENST00000348264 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
CLCC1-202ENST00000348264 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
CLCC1-202ENST00000348264 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
CLCC1-202ENST00000348264 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
CLCC1-202ENST00000348264 COL5A1-AS1Q5SY13 56 aa6.3□□□□□ -1.4
CLCC1-202ENST00000348264 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
CLCC1-202ENST00000348264 K7EP34 96 aa6.28□□□□□ -1.4
CLCC1-202ENST00000348264 CXCL6P80162 114 aa6.26□□□□□ -1.41
CLCC1-202ENST00000348264 UBL5Q9BZL1 73 aa6.26□□□□□ -1.41
CLCC1-202ENST00000348264 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
CLCC1-202ENST00000348264 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
CLCC1-202ENST00000348264 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
CLCC1-202ENST00000348264 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
CLCC1-202ENST00000348264 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
CLCC1-202ENST00000348264 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
CLCC1-202ENST00000348264 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
CLCC1-202ENST00000348264 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
CLCC1-202ENST00000348264 F8W1H4 67 aa6.13□□□□□ -1.43
CLCC1-202ENST00000348264 PCP4L1A6NKN8 68 aa6.11□□□□□ -1.43
CLCC1-202ENST00000348264 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
CLCC1-202ENST00000348264 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
CLCC1-202ENST00000348264 S4R3F8 94 aa6.11□□□□□ -1.43
CLCC1-202ENST00000348264 LCA10Q71F78 164 aa6.08□□□□□ -1.44
CLCC1-202ENST00000348264 SYNE2Q8WXH0 6885 aaKnown RBP6.07□□□□□ -1.44
CLCC1-202ENST00000348264 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
CLCC1-202ENST00000348264 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
CLCC1-202ENST00000348264 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
CLCC1-202ENST00000348264 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
CLCC1-202ENST00000348264 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
CLCC1-202ENST00000348264 TRAV22A0A0B4J277 110 aa6□□□□□ -1.45
CLCC1-202ENST00000348264 MT1BP07438 61 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms