RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 WDFY3Q8IZQ1 3526 aa7.11□□□□□ -1.27
TRAF3-201ENST00000347662 LCE6AA0A183 80 aa7.11□□□□□ -1.27
TRAF3-201ENST00000347662 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
TRAF3-201ENST00000347662 OXTP01178 125 aa7.09□□□□□ -1.28
TRAF3-201ENST00000347662 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
TRAF3-201ENST00000347662 NF1P21359 2839 aa7.07□□□□□ -1.28
TRAF3-201ENST00000347662 DCHS1Q96JQ0 3298 aa7.07□□□□□ -1.28
TRAF3-201ENST00000347662 FBN2P35556 2912 aa7.06□□□□□ -1.28
TRAF3-201ENST00000347662 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
TRAF3-201ENST00000347662 TENM1Q9UKZ4 2725 aa7.03□□□□□ -1.28
TRAF3-201ENST00000347662 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
TRAF3-201ENST00000347662 A8MUU9 505 aa6.99□□□□□ -1.29
TRAF3-201ENST00000347662 PKD1L1Q8TDX9 2849 aa6.99□□□□□ -1.29
TRAF3-201ENST00000347662 ASPMQ8IZT6 3477 aa6.98□□□□□ -1.29
TRAF3-201ENST00000347662 RELNP78509 3460 aa6.98□□□□□ -1.29
TRAF3-201ENST00000347662 SPRR1BP22528 89 aa6.97□□□□□ -1.29
TRAF3-201ENST00000347662 Q5XG85 94 aa6.96□□□□□ -1.29
TRAF3-201ENST00000347662 Q6ZR54 194 aa6.96□□□□□ -1.3
TRAF3-201ENST00000347662 PANO1I0J062 215 aa6.96□□□□□ -1.3
TRAF3-201ENST00000347662 TENM3Q9P273 2699 aa6.95□□□□□ -1.3
TRAF3-201ENST00000347662 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
TRAF3-201ENST00000347662 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
TRAF3-201ENST00000347662 LAMA5O15230 3695 aa6.93□□□□□ -1.3
TRAF3-201ENST00000347662 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
TRAF3-201ENST00000347662 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
TRAF3-201ENST00000347662 TNP1P09430 55 aa6.9□□□□□ -1.31
TRAF3-201ENST00000347662 A8MU10 97 aa6.88□□□□□ -1.31
TRAF3-201ENST00000347662 P0C880 135 aa6.88□□□□□ -1.31
TRAF3-201ENST00000347662 SPRR1AP35321 89 aa6.87□□□□□ -1.31
TRAF3-201ENST00000347662 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
TRAF3-201ENST00000347662 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
TRAF3-201ENST00000347662 MUC3AQ02505 3323 aa6.85□□□□□ -1.31
TRAF3-201ENST00000347662 NBPF19A0A087WUL8 3843 aa6.84□□□□□ -1.31
TRAF3-201ENST00000347662 HRNRQ86YZ3 2850 aaPredicted RBP6.84□□□□□ -1.31
TRAF3-201ENST00000347662 VWFP04275 2813 aa6.83□□□□□ -1.32
TRAF3-201ENST00000347662 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
TRAF3-201ENST00000347662 A0A087X002 238 aa6.79□□□□□ -1.32
TRAF3-201ENST00000347662 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
TRAF3-201ENST00000347662 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
TRAF3-201ENST00000347662 MXRA5Q9NR99 2828 aa6.74□□□□□ -1.33
TRAF3-201ENST00000347662 TENM2Q9NT68 2774 aa6.72□□□□□ -1.33
TRAF3-201ENST00000347662 ZFHX4Q86UP3 3567 aa6.7□□□□□ -1.34
TRAF3-201ENST00000347662 DMDP11532 3685 aa6.7□□□□□ -1.34
TRAF3-201ENST00000347662 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
TRAF3-201ENST00000347662 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
TRAF3-201ENST00000347662 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-201ENST00000347662 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
TRAF3-201ENST00000347662 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.35
TRAF3-201ENST00000347662 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
TRAF3-201ENST00000347662 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
TRAF3-201ENST00000347662 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
TRAF3-201ENST00000347662 PDZD2O15018 2839 aa6.61□□□□□ -1.35
TRAF3-201ENST00000347662 CUBNO60494 3623 aa6.58□□□□□ -1.36
TRAF3-201ENST00000347662 TGP01266 2768 aa6.56□□□□□ -1.36
TRAF3-201ENST00000347662 SMG1Q96Q15 3661 aaKnown RBP6.55□□□□□ -1.36
TRAF3-201ENST00000347662 CSMD1Q96PZ7 3565 aa6.54□□□□□ -1.36
TRAF3-201ENST00000347662 A6NN06 94 aa6.53□□□□□ -1.36
TRAF3-201ENST00000347662 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
TRAF3-201ENST00000347662 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
TRAF3-201ENST00000347662 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
TRAF3-201ENST00000347662 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
TRAF3-201ENST00000347662 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
TRAF3-201ENST00000347662 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
TRAF3-201ENST00000347662 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
TRAF3-201ENST00000347662 CSMD2Q7Z408 3487 aa6.44□□□□□ -1.38
TRAF3-201ENST00000347662 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
TRAF3-201ENST00000347662 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.39
TRAF3-201ENST00000347662 SPENQ96T58 3664 aaKnown RBP6.36□□□□□ -1.39
TRAF3-201ENST00000347662 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
TRAF3-201ENST00000347662 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
TRAF3-201ENST00000347662 XP32Q5T750 250 aa6.2□□□□□ -1.42
TRAF3-201ENST00000347662 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
TRAF3-201ENST00000347662 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
TRAF3-201ENST00000347662 FBN3Q75N90 2809 aa6.15□□□□□ -1.42
TRAF3-201ENST00000347662 H0YAA0 97 aa6.13□□□□□ -1.43
TRAF3-201ENST00000347662 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
TRAF3-201ENST00000347662 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
TRAF3-201ENST00000347662 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
TRAF3-201ENST00000347662 BSNQ9UPA5 3926 aa5.99□□□□□ -1.45
TRAF3-201ENST00000347662 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.45
TRAF3-201ENST00000347662 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
TRAF3-201ENST00000347662 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
TRAF3-201ENST00000347662 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
TRAF3-201ENST00000347662 ANK3Q12955 4377 aaKnown RBP5.84□□□□□ -1.48
TRAF3-201ENST00000347662 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
TRAF3-201ENST00000347662 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
TRAF3-201ENST00000347662 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
TRAF3-201ENST00000347662 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
TRAF3-201ENST00000347662 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
TRAF3-201ENST00000347662 INE1O15225 51 aa5.56□□□□□ -1.52
TRAF3-201ENST00000347662 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
TRAF3-201ENST00000347662 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
TRAF3-201ENST00000347662 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
TRAF3-201ENST00000347662 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
TRAF3-201ENST00000347662 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
TRAF3-201ENST00000347662 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
TRAF3-201ENST00000347662 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
TRAF3-201ENST00000347662 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
TRAF3-201ENST00000347662 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
TRAF3-201ENST00000347662 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms