RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KMT2CQ8NEZ4 4911 aaKnown RBP3.59□□□□□ -1.84
CLCN3-201ENST00000347613 A8MU10 97 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 A8MWP4 228 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
CLCN3-201ENST00000347613 IGLV5-52A0A0A0MRZ9 124 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 CASC2Q6XLA1 102 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
CLCN3-201ENST00000347613 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
CLCN3-201ENST00000347613 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
CLCN3-201ENST00000347613 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
CLCN3-201ENST00000347613 H0Y9P7 68 aa3.56□□□□□ -1.84
CLCN3-201ENST00000347613 PLAC8Q9NZF1 115 aa3.56□□□□□ -1.84
CLCN3-201ENST00000347613 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
CLCN3-201ENST00000347613 Q5W150 140 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 ZNF861PO60384 105 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 RYR3Q15413 4870 aa3.54□□□□□ -1.84
CLCN3-201ENST00000347613 PSPHP1O15172 72 aa3.53□□□□□ -1.84
CLCN3-201ENST00000347613 LY6G6CO95867 125 aa3.53□□□□□ -1.84
CLCN3-201ENST00000347613 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
CLCN3-201ENST00000347613 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
CLCN3-201ENST00000347613 RYR2Q92736 4967 aa3.53□□□□□ -1.84
CLCN3-201ENST00000347613 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
CLCN3-201ENST00000347613 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
CLCN3-201ENST00000347613 SPINK6Q6UWN8 80 aa3.52□□□□□ -1.85
CLCN3-201ENST00000347613 KRTAP10-1P60331 282 aa3.51□□□□□ -1.85
CLCN3-201ENST00000347613 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
CLCN3-201ENST00000347613 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
CLCN3-201ENST00000347613 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
CLCN3-201ENST00000347613 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
CLCN3-201ENST00000347613 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
CLCN3-201ENST00000347613 A0A1B0GVX0 72 aa3.5□□□□□ -1.85
CLCN3-201ENST00000347613 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
CLCN3-201ENST00000347613 A6NN06 94 aa3.49□□□□□ -1.85
CLCN3-201ENST00000347613 MP68P56378 58 aa3.49□□□□□ -1.85
CLCN3-201ENST00000347613 Q1T7F1 81 aa3.49□□□□□ -1.85
CLCN3-201ENST00000347613 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
CLCN3-201ENST00000347613 NDUFS5O43920 106 aa3.48□□□□□ -1.85
CLCN3-201ENST00000347613 Q5VV11 94 aa3.47□□□□□ -1.85
CLCN3-201ENST00000347613 HSPG2P98160 4391 aa3.47□□□□□ -1.85
CLCN3-201ENST00000347613 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CLCN3-201ENST00000347613 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.85
CLCN3-201ENST00000347613 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.85
CLCN3-201ENST00000347613 NDUFB1O75438 58 aa3.46□□□□□ -1.86
CLCN3-201ENST00000347613 COA5Q86WW8 74 aa3.46□□□□□ -1.86
CLCN3-201ENST00000347613 Q6ZSA8 131 aa3.45□□□□□ -1.86
CLCN3-201ENST00000347613 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
CLCN3-201ENST00000347613 HRES1P13985 223 aa3.45□□□□□ -1.86
CLCN3-201ENST00000347613 LCA10Q71F78 164 aa3.44□□□□□ -1.86
CLCN3-201ENST00000347613 MYCBP2O75592 4640 aa3.44□□□□□ -1.86
CLCN3-201ENST00000347613 ZNF706Q9Y5V0 76 aaPredicted RBP3.44□□□□□ -1.86
CLCN3-201ENST00000347613 TNXBP22105 4242 aa3.44□□□□□ -1.86
CLCN3-201ENST00000347613 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
CLCN3-201ENST00000347613 H3BPC8 53 aa3.43□□□□□ -1.86
CLCN3-201ENST00000347613 FAT3Q8TDW7 4589 aa3.42□□□□□ -1.86
CLCN3-201ENST00000347613 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
CLCN3-201ENST00000347613 LPAP08519 4548 aa3.42□□□□□ -1.86
CLCN3-201ENST00000347613 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
CLCN3-201ENST00000347613 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
CLCN3-201ENST00000347613 PRR15LQ9BU68 103 aa3.4□□□□□ -1.86
CLCN3-201ENST00000347613 LINC01554Q52M75 96 aa3.4□□□□□ -1.86
CLCN3-201ENST00000347613 LCE2BO14633 110 aa3.4□□□□□ -1.87
CLCN3-201ENST00000347613 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.87
CLCN3-201ENST00000347613 CDK2AP2O75956 126 aa3.39□□□□□ -1.87
CLCN3-201ENST00000347613 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
CLCN3-201ENST00000347613 SPINK7P58062 85 aa3.38□□□□□ -1.87
CLCN3-201ENST00000347613 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
CLCN3-201ENST00000347613 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
CLCN3-201ENST00000347613 LOC101927531A0A1B0GV80 90 aa3.36□□□□□ -1.87
CLCN3-201ENST00000347613 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
CLCN3-201ENST00000347613 KRTAP10-4P60372 401 aaPredicted RBP3.36□□□□□ -1.87
CLCN3-201ENST00000347613 SEC61BP60468 96 aaKnown RBP3.35□□□□□ -1.87
CLCN3-201ENST00000347613 EPPK1P58107 5090 aaKnown RBP3.35□□□□□ -1.87
CLCN3-201ENST00000347613 IGKV2-30P06310 120 aa3.34□□□□□ -1.87
CLCN3-201ENST00000347613 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
CLCN3-201ENST00000347613 KIAA1109Q2LD37 5005 aa3.34□□□□□ -1.87
CLCN3-201ENST00000347613 LIMD2Q9BT23 127 aa3.34□□□□□ -1.88
CLCN3-201ENST00000347613 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
CLCN3-201ENST00000347613 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
CLCN3-201ENST00000347613 RYR1P21817 5038 aa3.32□□□□□ -1.88
CLCN3-201ENST00000347613 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
CLCN3-201ENST00000347613 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
CLCN3-201ENST00000347613 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
CLCN3-201ENST00000347613 A6NED7 52 aa3.31□□□□□ -1.88
CLCN3-201ENST00000347613 C9orf92A6NGG3 77 aa3.31□□□□□ -1.88
CLCN3-201ENST00000347613 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
CLCN3-201ENST00000347613 FAM229AH3BQW9 127 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 Q8N1X5 172 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 FLG2Q5D862 2391 aaPredicted RBP3.29□□□□□ -1.88
CLCN3-201ENST00000347613 KRTAP3-1Q9BYR8 98 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 LRP2P98164 4655 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 P0C880 135 aa3.29□□□□□ -1.88
CLCN3-201ENST00000347613 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms