RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
RBM38-202ENST00000344785 FAM229BQ4G0N7 80 aa10.72□□□□□ -0.69
RBM38-202ENST00000344785 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
RBM38-202ENST00000344785 LINC00208Q96KT6 92 aa10.71□□□□□ -0.69
RBM38-202ENST00000344785 H0Y9P7 68 aa10.7□□□□□ -0.7
RBM38-202ENST00000344785 SERP1Q9Y6X1 66 aa10.7□□□□□ -0.7
RBM38-202ENST00000344785 SMR3BP02814 79 aaPredicted RBP10.7□□□□□ -0.7
RBM38-202ENST00000344785 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
RBM38-202ENST00000344785 MP68P56378 58 aa10.69□□□□□ -0.7
RBM38-202ENST00000344785 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
RBM38-202ENST00000344785 Q5XG85 94 aa10.66□□□□□ -0.7
RBM38-202ENST00000344785 TRAV22A0A0B4J277 110 aa10.65□□□□□ -0.7
RBM38-202ENST00000344785 ATP5EP56381 51 aaPredicted RBP10.65□□□□□ -0.71
RBM38-202ENST00000344785 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
RBM38-202ENST00000344785 MRPL34Q9BQ48 92 aaKnown RBP10.63□□□□□ -0.71
RBM38-202ENST00000344785 PRR4Q16378 134 aa10.62□□□□□ -0.71
RBM38-202ENST00000344785 NDUFS5O43920 106 aa10.61□□□□□ -0.71
RBM38-202ENST00000344785 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
RBM38-202ENST00000344785 RYR3Q15413 4870 aa10.6□□□□□ -0.71
RBM38-202ENST00000344785 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
RBM38-202ENST00000344785 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
RBM38-202ENST00000344785 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
RBM38-202ENST00000344785 H3BPC8 53 aa10.58□□□□□ -0.72
RBM38-202ENST00000344785 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
RBM38-202ENST00000344785 TYMSOSQ8TAI1 123 aa10.57□□□□□ -0.72
RBM38-202ENST00000344785 PKHD1L1Q86WI1 4243 aa10.55□□□□□ -0.72
RBM38-202ENST00000344785 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
RBM38-202ENST00000344785 Q5W150 140 aa10.53□□□□□ -0.72
RBM38-202ENST00000344785 LINC00313P59037 77 aa10.49□□□□□ -0.73
RBM38-202ENST00000344785 KRTAP13-3Q3SY46 172 aa10.49□□□□□ -0.73
RBM38-202ENST00000344785 CYP4F30PQ9H0H9 118 aa10.49□□□□□ -0.73
RBM38-202ENST00000344785 SMIM26A0A096LP01 95 aa10.49□□□□□ -0.73
RBM38-202ENST00000344785 C8orf87E5RJ46 101 aa10.48□□□□□ -0.73
RBM38-202ENST00000344785 PCOTHQ58A44 107 aa10.48□□□□□ -0.73
RBM38-202ENST00000344785 C4orf48Q5BLP8 95 aa10.47□□□□□ -0.73
RBM38-202ENST00000344785 LIMD2Q9BT23 127 aa10.47□□□□□ -0.73
RBM38-202ENST00000344785 SPINK1P00995 79 aa10.46□□□□□ -0.74
RBM38-202ENST00000344785 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
RBM38-202ENST00000344785 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
RBM38-202ENST00000344785 HSPG2P98160 4391 aa10.44□□□□□ -0.74
RBM38-202ENST00000344785 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
RBM38-202ENST00000344785 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
RBM38-202ENST00000344785 RETNLBQ9BQ08 111 aa10.39□□□□□ -0.75
RBM38-202ENST00000344785 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
RBM38-202ENST00000344785 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
RBM38-202ENST00000344785 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
RBM38-202ENST00000344785 RYR1P21817 5038 aa10.36□□□□□ -0.75
RBM38-202ENST00000344785 TNXBP22105 4242 aa10.32□□□□□ -0.76
RBM38-202ENST00000344785 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
RBM38-202ENST00000344785 RPS29P62273 56 aaKnown RBP10.32□□□□□ -0.76
RBM38-202ENST00000344785 SPAG11AQ6PDA7 123 aa10.31□□□□□ -0.76
RBM38-202ENST00000344785 KRTAP17-1Q9BYP8 105 aa10.29□□□□□ -0.76
RBM38-202ENST00000344785 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
RBM38-202ENST00000344785 KIAA1109Q2LD37 5005 aa10.27□□□□□ -0.77
RBM38-202ENST00000344785 COA5Q86WW8 74 aa10.24□□□□□ -0.77
RBM38-202ENST00000344785 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
RBM38-202ENST00000344785 FAT3Q8TDW7 4589 aa10.21□□□□□ -0.77
RBM38-202ENST00000344785 EPPK1P58107 5090 aaKnown RBP10.21□□□□□ -0.77
RBM38-202ENST00000344785 IGKV2-30P06310 120 aa10.21□□□□□ -0.77
RBM38-202ENST00000344785 Q1T7F1 81 aa10.2□□□□□ -0.78
RBM38-202ENST00000344785 HRES1P13985 223 aa10.19□□□□□ -0.78
RBM38-202ENST00000344785 Q5VSD8 79 aa10.19□□□□□ -0.78
RBM38-202ENST00000344785 PRO0628Q9UI54 55 aa10.18□□□□□ -0.78
RBM38-202ENST00000344785 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
RBM38-202ENST00000344785 Q8N1X5 172 aa10.17□□□□□ -0.78
RBM38-202ENST00000344785 MYCBP2O75592 4640 aa10.15□□□□□ -0.78
RBM38-202ENST00000344785 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
RBM38-202ENST00000344785 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
RBM38-202ENST00000344785 PSPHP1O15172 72 aa10.11□□□□□ -0.79
RBM38-202ENST00000344785 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
RBM38-202ENST00000344785 DMBT1Q9UGM3 2413 aaPredicted RBP10.08□□□□□ -0.8
RBM38-202ENST00000344785 A8MUN3 132 aa10.07□□□□□ -0.8
RBM38-202ENST00000344785 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
RBM38-202ENST00000344785 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
RBM38-202ENST00000344785 A8MUU9 505 aa10.05□□□□□ -0.8
RBM38-202ENST00000344785 ACYP2P14621 99 aa10.01□□□□□ -0.81
RBM38-202ENST00000344785 Q5VV11 94 aa9.99□□□□□ -0.81
RBM38-202ENST00000344785 V9GYY9 64 aa9.99□□□□□ -0.81
RBM38-202ENST00000344785 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
RBM38-202ENST00000344785 PRR15LQ9BU68 103 aa9.95□□□□□ -0.82
RBM38-202ENST00000344785 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
RBM38-202ENST00000344785 LINC01558Q9Y6Z2 57 aa9.91□□□□□ -0.82
RBM38-202ENST00000344785 Q75L30 129 aa9.87□□□□□ -0.83
RBM38-202ENST00000344785 A8MU10 97 aa9.86□□□□□ -0.83
RBM38-202ENST00000344785 CHKB-CPT1BH3BT56 60 aa9.86□□□□□ -0.83
RBM38-202ENST00000344785 BIRC6Q9NR09 4857 aa9.85□□□□□ -0.83
RBM38-202ENST00000344785 SPINK7P58062 85 aa9.84□□□□□ -0.83
RBM38-202ENST00000344785 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
RBM38-202ENST00000344785 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
RBM38-202ENST00000344785 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
RBM38-202ENST00000344785 XP32Q5T750 250 aa9.75□□□□□ -0.85
RBM38-202ENST00000344785 LCA10Q71F78 164 aa9.71□□□□□ -0.85
RBM38-202ENST00000344785 SEC61GP60059 68 aa9.71□□□□□ -0.86
RBM38-202ENST00000344785 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.86
RBM38-202ENST00000344785 A6NED7 52 aa9.7□□□□□ -0.86
RBM38-202ENST00000344785 LRP2P98164 4655 aa9.69□□□□□ -0.86
RBM38-202ENST00000344785 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
RBM38-202ENST00000344785 LPAP08519 4548 aa9.68□□□□□ -0.86
RBM38-202ENST00000344785 HERC2O95714 4834 aa9.67□□□□□ -0.86
RBM38-202ENST00000344785 A0A1B0GU69 56 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms