RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
HMGN3-202ENST00000344726 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
HMGN3-202ENST00000344726 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
HMGN3-202ENST00000344726 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
HMGN3-202ENST00000344726 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
HMGN3-202ENST00000344726 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
HMGN3-202ENST00000344726 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
HMGN3-202ENST00000344726 M0R2T5 61 aa7.44□□□□□ -1.22
HMGN3-202ENST00000344726 BAALC-AS2P0C853 105 aa7.44□□□□□ -1.22
HMGN3-202ENST00000344726 LINC00313P59037 77 aa7.44□□□□□ -1.22
HMGN3-202ENST00000344726 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
HMGN3-202ENST00000344726 M0R143 59 aa7.43□□□□□ -1.22
HMGN3-202ENST00000344726 VPS25Q9BRG1 176 aa7.43□□□□□ -1.22
HMGN3-202ENST00000344726 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
HMGN3-202ENST00000344726 DSCR8Q96T75 97 aa7.41□□□□□ -1.22
HMGN3-202ENST00000344726 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
HMGN3-202ENST00000344726 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
HMGN3-202ENST00000344726 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
HMGN3-202ENST00000344726 C9JAW5 83 aa7.37□□□□□ -1.23
HMGN3-202ENST00000344726 Q6ZQT0 140 aa7.35□□□□□ -1.23
HMGN3-202ENST00000344726 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
HMGN3-202ENST00000344726 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
HMGN3-202ENST00000344726 LOC110117498A0A087WWA1 95 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 LOC105371267A0A1B0GV96 52 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 C8orf87E5RJ46 101 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 TSTD3H0UI37 97 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 BATFQ16520 125 aa7.31□□□□□ -1.24
HMGN3-202ENST00000344726 TRBV20-1A0A075B6N2 111 aa7.3□□□□□ -1.24
HMGN3-202ENST00000344726 J3KT08 172 aa7.29□□□□□ -1.24
HMGN3-202ENST00000344726 LCE5AQ5TCM9 118 aa7.29□□□□□ -1.24
HMGN3-202ENST00000344726 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
HMGN3-202ENST00000344726 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
HMGN3-202ENST00000344726 HRES1P13985 223 aa7.28□□□□□ -1.24
HMGN3-202ENST00000344726 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
HMGN3-202ENST00000344726 USH2AO75445 5202 aa7.27□□□□□ -1.25
HMGN3-202ENST00000344726 LYRM7Q5U5X0 104 aa7.27□□□□□ -1.25
HMGN3-202ENST00000344726 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
HMGN3-202ENST00000344726 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
HMGN3-202ENST00000344726 A0A1B0GW54 56 aa7.25□□□□□ -1.25
HMGN3-202ENST00000344726 TAX1BP3O14907 124 aa7.24□□□□□ -1.25
HMGN3-202ENST00000344726 PDE6GP18545 87 aa7.24□□□□□ -1.25
HMGN3-202ENST00000344726 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
HMGN3-202ENST00000344726 IGKV3D-7A0A0C4DH55 119 aa7.23□□□□□ -1.25
HMGN3-202ENST00000344726 A8MWP4 228 aa7.23□□□□□ -1.25
HMGN3-202ENST00000344726 NDUFB1O75438 58 aa7.22□□□□□ -1.25
HMGN3-202ENST00000344726 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
HMGN3-202ENST00000344726 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
HMGN3-202ENST00000344726 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
HMGN3-202ENST00000344726 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
HMGN3-202ENST00000344726 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
HMGN3-202ENST00000344726 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
HMGN3-202ENST00000344726 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
HMGN3-202ENST00000344726 H3BT86 120 aa7.18□□□□□ -1.26
HMGN3-202ENST00000344726 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
HMGN3-202ENST00000344726 NREPQ16612 68 aa7.17□□□□□ -1.26
HMGN3-202ENST00000344726 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
HMGN3-202ENST00000344726 MT2AP02795 61 aa7.16□□□□□ -1.26
HMGN3-202ENST00000344726 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
HMGN3-202ENST00000344726 SPINK7P58062 85 aa7.15□□□□□ -1.26
HMGN3-202ENST00000344726 Q6ZVQ6 151 aa7.15□□□□□ -1.26
HMGN3-202ENST00000344726 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
HMGN3-202ENST00000344726 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
HMGN3-202ENST00000344726 K7EQZ3 153 aa7.11□□□□□ -1.27
HMGN3-202ENST00000344726 MT1FP04733 61 aa7.11□□□□□ -1.27
HMGN3-202ENST00000344726 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
HMGN3-202ENST00000344726 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
HMGN3-202ENST00000344726 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
HMGN3-202ENST00000344726 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
HMGN3-202ENST00000344726 hDV103S1A0JD37 113 aa7.06□□□□□ -1.28
HMGN3-202ENST00000344726 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
HMGN3-202ENST00000344726 BPY2O14599 106 aa7.04□□□□□ -1.28
HMGN3-202ENST00000344726 PRO0461Q9UI25 63 aa7.03□□□□□ -1.28
HMGN3-202ENST00000344726 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
HMGN3-202ENST00000344726 Q8N9L7 120 aa7.02□□□□□ -1.29
HMGN3-202ENST00000344726 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
HMGN3-202ENST00000344726 NDUFS5O43920 106 aa7□□□□□ -1.29
HMGN3-202ENST00000344726 K7EP34 96 aa6.99□□□□□ -1.29
HMGN3-202ENST00000344726 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
HMGN3-202ENST00000344726 Q5W150 140 aa6.98□□□□□ -1.29
HMGN3-202ENST00000344726 LINC00846Q9NV44 126 aa6.96□□□□□ -1.3
HMGN3-202ENST00000344726 CASC2Q6XLA1 102 aa6.95□□□□□ -1.3
HMGN3-202ENST00000344726 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
HMGN3-202ENST00000344726 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
HMGN3-202ENST00000344726 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
HMGN3-202ENST00000344726 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
HMGN3-202ENST00000344726 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
HMGN3-202ENST00000344726 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
HMGN3-202ENST00000344726 PCP4L1A6NKN8 68 aa6.87□□□□□ -1.31
HMGN3-202ENST00000344726 CXCL6P80162 114 aa6.85□□□□□ -1.31
HMGN3-202ENST00000344726 GTF2H5Q6ZYL4 71 aa6.85□□□□□ -1.31
HMGN3-202ENST00000344726 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
HMGN3-202ENST00000344726 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
HMGN3-202ENST00000344726 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
HMGN3-202ENST00000344726 F8W1H4 67 aa6.83□□□□□ -1.32
HMGN3-202ENST00000344726 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
HMGN3-202ENST00000344726 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
HMGN3-202ENST00000344726 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.34
HMGN3-202ENST00000344726 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
HMGN3-202ENST00000344726 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms