RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 DNAH17Q9UFH2 4485 aa13.72□□□□□ -0.21
NKX2-3-201ENST00000344586 A8MU10 97 aa13.71□□□□□ -0.21
NKX2-3-201ENST00000344586 CHKB-CPT1BH3BT56 60 aa13.7□□□□□ -0.22
NKX2-3-201ENST00000344586 DNAH2Q9P225 4427 aa13.69□□□□□ -0.22
NKX2-3-201ENST00000344586 KRTAP21-3Q3LHN1 58 aa13.68□□□□□ -0.22
NKX2-3-201ENST00000344586 LOC101927531A0A1B0GV80 90 aa13.66□□□□□ -0.22
NKX2-3-201ENST00000344586 Q75L30 129 aa13.65□□□□□ -0.22
NKX2-3-201ENST00000344586 KMT2AQ03164 3969 aa13.6□□□□□ -0.23
NKX2-3-201ENST00000344586 HRES1P13985 223 aa13.59□□□□□ -0.23
NKX2-3-201ENST00000344586 IGLV7-43P04211 117 aa13.59□□□□□ -0.23
NKX2-3-201ENST00000344586 SPINK6Q6UWN8 80 aa13.59□□□□□ -0.23
NKX2-3-201ENST00000344586 FBN3Q75N90 2809 aa13.58□□□□□ -0.23
NKX2-3-201ENST00000344586 KRTAP13-3Q3SY46 172 aa13.57□□□□□ -0.24
NKX2-3-201ENST00000344586 PMAIP1Q13794 54 aa13.56□□□□□ -0.24
NKX2-3-201ENST00000344586 Q5W150 140 aa13.55□□□□□ -0.24
NKX2-3-201ENST00000344586 SPAG11AQ6PDA7 123 aa13.55□□□□□ -0.24
NKX2-3-201ENST00000344586 LINC01558Q9Y6Z2 57 aa13.55□□□□□ -0.24
NKX2-3-201ENST00000344586 CIRBP-AS1Q8TBR5 109 aa13.54□□□□□ -0.24
NKX2-3-201ENST00000344586 LCA10Q71F78 164 aa13.52□□□□□ -0.24
NKX2-3-201ENST00000344586 A6NED7 52 aa13.51□□□□□ -0.25
NKX2-3-201ENST00000344586 ALMS1Q8TCU4 4167 aa13.5□□□□□ -0.25
NKX2-3-201ENST00000344586 C1orf134Q5TEV5 83 aa13.48□□□□□ -0.25
NKX2-3-201ENST00000344586 DNHD1Q96M86 4753 aa13.48□□□□□ -0.25
NKX2-3-201ENST00000344586 C8orf87E5RJ46 101 aa13.43□□□□□ -0.26
NKX2-3-201ENST00000344586 SSBP3-AS1Q7Z2R9 100 aa13.43□□□□□ -0.26
NKX2-3-201ENST00000344586 CDC42SE1Q9NRR8 79 aa13.4□□□□□ -0.26
NKX2-3-201ENST00000344586 DNAH11Q96DT5 4516 aa13.4□□□□□ -0.26
NKX2-3-201ENST00000344586 ATP11AUNQ6ZP68 121 aa13.4□□□□□ -0.27
NKX2-3-201ENST00000344586 SPTSSBQ8NFR3 76 aa13.4□□□□□ -0.27
NKX2-3-201ENST00000344586 MEGF8Q7Z7M0 2845 aa13.39□□□□□ -0.27
NKX2-3-201ENST00000344586 DNAH6Q9C0G6 4158 aa13.37□□□□□ -0.27
NKX2-3-201ENST00000344586 PRR26Q8N8Z3 221 aa13.35□□□□□ -0.27
NKX2-3-201ENST00000344586 DNAH5Q8TE73 4624 aa13.34□□□□□ -0.27
NKX2-3-201ENST00000344586 SPINK7P58062 85 aa13.33□□□□□ -0.28
NKX2-3-201ENST00000344586 SEC61GP60059 68 aa13.32□□□□□ -0.28
NKX2-3-201ENST00000344586 LINC00313P59037 77 aa13.32□□□□□ -0.28
NKX2-3-201ENST00000344586 KRTAP10-2P60368 255 aa13.32□□□□□ -0.28
NKX2-3-201ENST00000344586 KRTAP13-2Q52LG2 175 aa13.3□□□□□ -0.28
NKX2-3-201ENST00000344586 TGP01266 2768 aa13.3□□□□□ -0.28
NKX2-3-201ENST00000344586 LY6G6CO95867 125 aa13.3□□□□□ -0.28
NKX2-3-201ENST00000344586 ACYP2P14621 99 aa13.29□□□□□ -0.28
NKX2-3-201ENST00000344586 DMAC1Q96GE9 116 aa13.28□□□□□ -0.28
NKX2-3-201ENST00000344586 A6NN06 94 aa13.27□□□□□ -0.28
NKX2-3-201ENST00000344586 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
NKX2-3-201ENST00000344586 KTN1-AS1Q86SY8 53 aa13.24□□□□□ -0.29
NKX2-3-201ENST00000344586 RETNLBQ9BQ08 111 aa13.24□□□□□ -0.29
NKX2-3-201ENST00000344586 IGKV2-30P06310 120 aa13.21□□□□□ -0.29
NKX2-3-201ENST00000344586 KRTAP16-1A8MUX0 517 aa13.2□□□□□ -0.3
NKX2-3-201ENST00000344586 Q6ZSA8 131 aa13.17□□□□□ -0.3
NKX2-3-201ENST00000344586 LRP1BQ9NZR2 4599 aa13.16□□□□□ -0.3
NKX2-3-201ENST00000344586 KRTAP10-1P60331 282 aa13.14□□□□□ -0.31
NKX2-3-201ENST00000344586 KRTAP1-4P0C5Y4 121 aa13.12□□□□□ -0.31
NKX2-3-201ENST00000344586 PKD1P98161 4303 aa13.11□□□□□ -0.31
NKX2-3-201ENST00000344586 FAT2Q9NYQ8 4349 aa13.05□□□□□ -0.32
NKX2-3-201ENST00000344586 IGKV2D-30A0A075B6S6 120 aa13□□□□□ -0.33
NKX2-3-201ENST00000344586 A0A1B0GU69 56 aa13□□□□□ -0.33
NKX2-3-201ENST00000344586 C7orf65Q6ZTY9 151 aa13□□□□□ -0.33
NKX2-3-201ENST00000344586 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
NKX2-3-201ENST00000344586 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.33
NKX2-3-201ENST00000344586 RBM12B-AS1Q9P1G2 102 aa12.95□□□□□ -0.34
NKX2-3-201ENST00000344586 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
NKX2-3-201ENST00000344586 C4orf48Q5BLP8 95 aa12.91□□□□□ -0.34
NKX2-3-201ENST00000344586 TYMSOSQ8TAI1 123 aa12.91□□□□□ -0.34
NKX2-3-201ENST00000344586 SPINK1P00995 79 aa12.89□□□□□ -0.35
NKX2-3-201ENST00000344586 SPATA8Q6RVD6 105 aa12.87□□□□□ -0.35
NKX2-3-201ENST00000344586 MIR22HGQ0VDD5 57 aa12.78□□□□□ -0.36
NKX2-3-201ENST00000344586 UQCR11O14957 56 aa12.77□□□□□ -0.36
NKX2-3-201ENST00000344586 LINC00304Q8N9R0 145 aa12.73□□□□□ -0.37
NKX2-3-201ENST00000344586 RPS29P62273 56 aaKnown RBP12.72□□□□□ -0.37
NKX2-3-201ENST00000344586 Q8N1X5 172 aa12.72□□□□□ -0.37
NKX2-3-201ENST00000344586 SACSQ9NZJ4 4579 aa12.7□□□□□ -0.38
NKX2-3-201ENST00000344586 PKHD1P08F94 4074 aa12.66□□□□□ -0.38
NKX2-3-201ENST00000344586 PRAC1Q96KF2 57 aa12.65□□□□□ -0.38
NKX2-3-201ENST00000344586 ADM2Q7Z4H4 148 aa12.63□□□□□ -0.39
NKX2-3-201ENST00000344586 C20orf166-AS1Q96NR2 134 aa12.54□□□□□ -0.4
NKX2-3-201ENST00000344586 PKHD1L1Q86WI1 4243 aa12.54□□□□□ -0.4
NKX2-3-201ENST00000344586 C9orf92A6NGG3 77 aa12.53□□□□□ -0.4
NKX2-3-201ENST00000344586 A8MUU9 505 aa12.53□□□□□ -0.4
NKX2-3-201ENST00000344586 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
NKX2-3-201ENST00000344586 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
NKX2-3-201ENST00000344586 KRTAP3-1Q9BYR8 98 aa12.46□□□□□ -0.42
NKX2-3-201ENST00000344586 APOBP04114 4563 aaKnown RBP12.43□□□□□ -0.42
NKX2-3-201ENST00000344586 KRTAP10-4P60372 401 aaPredicted RBP12.42□□□□□ -0.42
NKX2-3-201ENST00000344586 FAT1Q14517 4588 aa12.38□□□□□ -0.43
NKX2-3-201ENST00000344586 H0YAA0 97 aa12.38□□□□□ -0.43
NKX2-3-201ENST00000344586 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
NKX2-3-201ENST00000344586 LINC01554Q52M75 96 aa12.27□□□□□ -0.45
NKX2-3-201ENST00000344586 CSAG1Q6PB30 78 aa12.26□□□□□ -0.45
NKX2-3-201ENST00000344586 A0A1B0GU33 70 aa12.25□□□□□ -0.45
NKX2-3-201ENST00000344586 H1FX-AS1Q4G0G2 97 aa12.23□□□□□ -0.45
NKX2-3-201ENST00000344586 COX6B2Q6YFQ2 88 aa12.18□□□□□ -0.46
NKX2-3-201ENST00000344586 FLG2Q5D862 2391 aaPredicted RBP12.07□□□□□ -0.48
NKX2-3-201ENST00000344586 FAT3Q8TDW7 4589 aa12.06□□□□□ -0.48
NKX2-3-201ENST00000344586 RYR2Q92736 4967 aa12.03□□□□□ -0.48
NKX2-3-201ENST00000344586 KMT2CQ8NEZ4 4911 aaKnown RBP12.01□□□□□ -0.49
NKX2-3-201ENST00000344586 TNXBP22105 4242 aa11.99□□□□□ -0.49
NKX2-3-201ENST00000344586 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
NKX2-3-201ENST00000344586 KRTAP25-1Q3LHN0 102 aa11.92□□□□□ -0.5
NKX2-3-201ENST00000344586 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
NKX2-3-201ENST00000344586 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms