RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 PDE6GP18545 87 aa10.25□□□□□ -0.77
CEACAM3-201ENST00000344550 Q6ZQT0 140 aa10.24□□□□□ -0.77
CEACAM3-201ENST00000344550 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
CEACAM3-201ENST00000344550 NOTCH2NLQ7Z3S9 236 aa10.23□□□□□ -0.77
CEACAM3-201ENST00000344550 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
CEACAM3-201ENST00000344550 CRCT1Q9UGL9 99 aa10.21□□□□□ -0.77
CEACAM3-201ENST00000344550 FSIP2Q5CZC0 6907 aa10.18□□□□□ -0.78
CEACAM3-201ENST00000344550 NDUFB1O75438 58 aa10.18□□□□□ -0.78
CEACAM3-201ENST00000344550 TSTD3H0UI37 97 aa10.16□□□□□ -0.78
CEACAM3-201ENST00000344550 RBM12B-AS1Q9P1G2 102 aa10.14□□□□□ -0.79
CEACAM3-201ENST00000344550 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
CEACAM3-201ENST00000344550 NAA38Q9BRA0 125 aaKnown RBP10.13□□□□□ -0.79
CEACAM3-201ENST00000344550 A8MWP4 228 aa10.1□□□□□ -0.79
CEACAM3-201ENST00000344550 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
CEACAM3-201ENST00000344550 HRES1P13985 223 aa10.09□□□□□ -0.79
CEACAM3-201ENST00000344550 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 ZCCHC13Q8WW36 166 aaKnown RBP10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 C14orf132Q9NPU4 83 aa10.06□□□□□ -0.8
CEACAM3-201ENST00000344550 MTURNQ8N3F0 131 aa10.05□□□□□ -0.8
CEACAM3-201ENST00000344550 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
CEACAM3-201ENST00000344550 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 H3BT86 120 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 NREPQ16612 68 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
CEACAM3-201ENST00000344550 BATFQ16520 125 aa10.01□□□□□ -0.81
CEACAM3-201ENST00000344550 PRR15Q8IV56 129 aa10□□□□□ -0.81
CEACAM3-201ENST00000344550 SPINK7P58062 85 aa9.99□□□□□ -0.81
CEACAM3-201ENST00000344550 Q6ZVQ6 151 aa9.97□□□□□ -0.81
CEACAM3-201ENST00000344550 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
CEACAM3-201ENST00000344550 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
CEACAM3-201ENST00000344550 TAX1BP3O14907 124 aa9.94□□□□□ -0.82
CEACAM3-201ENST00000344550 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
CEACAM3-201ENST00000344550 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
CEACAM3-201ENST00000344550 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
CEACAM3-201ENST00000344550 hDV103S1A0JD37 113 aa9.85□□□□□ -0.83
CEACAM3-201ENST00000344550 MT2AP02795 61 aa9.85□□□□□ -0.83
CEACAM3-201ENST00000344550 BPY2O14599 106 aa9.83□□□□□ -0.84
CEACAM3-201ENST00000344550 K7EQZ3 153 aa9.82□□□□□ -0.84
CEACAM3-201ENST00000344550 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
CEACAM3-201ENST00000344550 SPCS1Q9Y6A9 102 aa9.81□□□□□ -0.84
CEACAM3-201ENST00000344550 NDUFS5O43920 106 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 MT1FP04733 61 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 COL5A1-AS1Q5SY13 56 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 KRTAP9-3Q9BYQ3 159 aa9.71□□□□□ -0.86
CEACAM3-201ENST00000344550 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
CEACAM3-201ENST00000344550 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
CEACAM3-201ENST00000344550 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 C7orf65Q6ZTY9 151 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 PRO0461Q9UI25 63 aa9.66□□□□□ -0.86
CEACAM3-201ENST00000344550 K7EP34 96 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 CXCL6P80162 114 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 USH2AO75445 5202 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 Q5W150 140 aa9.63□□□□□ -0.87
CEACAM3-201ENST00000344550 LCE2BO14633 110 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 Q8N9L7 120 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 HCG22E2RYF7 251 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 GTF2H5Q6ZYL4 71 aa9.58□□□□□ -0.88
CEACAM3-201ENST00000344550 SSPOA2VEC9 5147 aa9.55□□□□□ -0.88
CEACAM3-201ENST00000344550 F8W1H4 67 aa9.53□□□□□ -0.88
CEACAM3-201ENST00000344550 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
CEACAM3-201ENST00000344550 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
CEACAM3-201ENST00000344550 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
CEACAM3-201ENST00000344550 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
CEACAM3-201ENST00000344550 ETDBQ3ZM63 59 aa9.41□□□□□ -0.9
CEACAM3-201ENST00000344550 FCGBPQ9Y6R7 5405 aaPredicted RBP9.4□□□□□ -0.9
CEACAM3-201ENST00000344550 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
CEACAM3-201ENST00000344550 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
CEACAM3-201ENST00000344550 ACYP1P07311 99 aa9.34□□□□□ -0.91
CEACAM3-201ENST00000344550 PCP4L1A6NKN8 68 aa9.33□□□□□ -0.92
CEACAM3-201ENST00000344550 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CEACAM3-201ENST00000344550 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
CEACAM3-201ENST00000344550 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
CEACAM3-201ENST00000344550 S4R3F8 94 aa9.28□□□□□ -0.92
CEACAM3-201ENST00000344550 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
CEACAM3-201ENST00000344550 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
CEACAM3-201ENST00000344550 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
CEACAM3-201ENST00000344550 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
CEACAM3-201ENST00000344550 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
CEACAM3-201ENST00000344550 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
CEACAM3-201ENST00000344550 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
CEACAM3-201ENST00000344550 LCA10Q71F78 164 aa9.19□□□□□ -0.94
CEACAM3-201ENST00000344550 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
CEACAM3-201ENST00000344550 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
CEACAM3-201ENST00000344550 UQCRQO14949 82 aa9.13□□□□□ -0.95
CEACAM3-201ENST00000344550 ATOX1O00244 68 aa9.12□□□□□ -0.95
CEACAM3-201ENST00000344550 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
CEACAM3-201ENST00000344550 SPRR2GQ9BYE4 73 aa9.09□□□□□ -0.95
CEACAM3-201ENST00000344550 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
CEACAM3-201ENST00000344550 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
CEACAM3-201ENST00000344550 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
CEACAM3-201ENST00000344550 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
CEACAM3-201ENST00000344550 H0Y9P7 68 aa9.02□□□□□ -0.97
CEACAM3-201ENST00000344550 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms