RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 TNRC18O15417 2968 aaPredicted RBP4.52□□□□□ -1.69
FGD6-201ENST00000343958 CFAP46Q8IYW2 2715 aa4.51□□□□□ -1.69
FGD6-201ENST00000343958 BOD1L1Q8NFC6 3051 aa4.51□□□□□ -1.69
FGD6-201ENST00000343958 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
FGD6-201ENST00000343958 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
FGD6-201ENST00000343958 ZZEF1O43149 2961 aa4.49□□□□□ -1.69
FGD6-201ENST00000343958 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
FGD6-201ENST00000343958 CHD6Q8TD26 2715 aa4.48□□□□□ -1.69
FGD6-201ENST00000343958 SVEP1Q4LDE5 3571 aa4.48□□□□□ -1.69
FGD6-201ENST00000343958 COL12A1Q99715 3063 aa4.48□□□□□ -1.69
FGD6-201ENST00000343958 NBEAQ8NFP9 2946 aa4.46□□□□□ -1.7
FGD6-201ENST00000343958 MAST4O15021 2626 aa4.46□□□□□ -1.7
FGD6-201ENST00000343958 DMXL2Q8TDJ6 3036 aa4.46□□□□□ -1.7
FGD6-201ENST00000343958 LRBAP50851 2863 aa4.46□□□□□ -1.7
FGD6-201ENST00000343958 SMG1Q96Q15 3661 aaKnown RBP4.45□□□□□ -1.7
FGD6-201ENST00000343958 P0C880 135 aa4.45□□□□□ -1.7
FGD6-201ENST00000343958 TACC2O95359 2948 aa4.44□□□□□ -1.7
FGD6-201ENST00000343958 CUBNO60494 3623 aa4.44□□□□□ -1.7
FGD6-201ENST00000343958 GCN1Q92616 2671 aaKnown RBP4.43□□□□□ -1.7
FGD6-201ENST00000343958 SETXQ7Z333 2677 aaKnown RBP4.42□□□□□ -1.7
FGD6-201ENST00000343958 TNP1P09430 55 aa4.42□□□□□ -1.7
FGD6-201ENST00000343958 TEX15Q9BXT5 2789 aa4.42□□□□□ -1.7
FGD6-201ENST00000343958 ITPR1Q14643 2758 aa4.42□□□□□ -1.7
FGD6-201ENST00000343958 FBN2P35556 2912 aa4.41□□□□□ -1.7
FGD6-201ENST00000343958 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
FGD6-201ENST00000343958 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
FGD6-201ENST00000343958 HRNRQ86YZ3 2850 aaPredicted RBP4.36□□□□□ -1.71
FGD6-201ENST00000343958 TEP1Q99973 2627 aaKnown RBP4.36□□□□□ -1.71
FGD6-201ENST00000343958 DMXL1Q9Y485 3027 aa4.36□□□□□ -1.71
FGD6-201ENST00000343958 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
FGD6-201ENST00000343958 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.71
FGD6-201ENST00000343958 ZFHX3Q15911 3703 aa4.34□□□□□ -1.71
FGD6-201ENST00000343958 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.72
FGD6-201ENST00000343958 NBPF19A0A087WUL8 3843 aa4.34□□□□□ -1.72
FGD6-201ENST00000343958 MUC3AQ02505 3323 aa4.34□□□□□ -1.72
FGD6-201ENST00000343958 CENPEQ02224 2701 aa4.33□□□□□ -1.72
FGD6-201ENST00000343958 COL6A5A8TX70 2615 aa4.32□□□□□ -1.72
FGD6-201ENST00000343958 SPENQ96T58 3664 aaKnown RBP4.32□□□□□ -1.72
FGD6-201ENST00000343958 HIVEP1P15822 2718 aa4.31□□□□□ -1.72
FGD6-201ENST00000343958 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
FGD6-201ENST00000343958 UTP20O75691 2785 aaKnown RBP4.3□□□□□ -1.72
FGD6-201ENST00000343958 STAB1Q9NY15 2570 aa4.29□□□□□ -1.72
FGD6-201ENST00000343958 NOTCH1P46531 2555 aa4.29□□□□□ -1.72
FGD6-201ENST00000343958 APCP25054 2843 aa4.28□□□□□ -1.72
FGD6-201ENST00000343958 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
FGD6-201ENST00000343958 CRYBG3Q68DQ2 2970 aa4.25□□□□□ -1.73
FGD6-201ENST00000343958 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
FGD6-201ENST00000343958 STAB2Q8WWQ8 2551 aa4.24□□□□□ -1.73
FGD6-201ENST00000343958 FLNCQ14315 2725 aa4.22□□□□□ -1.73
FGD6-201ENST00000343958 NBEAL1Q6ZS30 2694 aa4.22□□□□□ -1.73
FGD6-201ENST00000343958 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.73
FGD6-201ENST00000343958 BAHCC1Q9P281 2608 aa4.21□□□□□ -1.74
FGD6-201ENST00000343958 ASH1LQ9NR48 2969 aaKnown RBP4.21□□□□□ -1.74
FGD6-201ENST00000343958 NSD1Q96L73 2696 aaPredicted RBP4.21□□□□□ -1.74
FGD6-201ENST00000343958 MAP1AP78559 2803 aaPredicted RBP4.2□□□□□ -1.74
FGD6-201ENST00000343958 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
FGD6-201ENST00000343958 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
FGD6-201ENST00000343958 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
FGD6-201ENST00000343958 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
FGD6-201ENST00000343958 DMBT1Q9UGM3 2413 aaPredicted RBP4.15□□□□□ -1.74
FGD6-201ENST00000343958 TENM4Q6N022 2769 aa4.15□□□□□ -1.75
FGD6-201ENST00000343958 PDZD2O15018 2839 aa4.14□□□□□ -1.75
FGD6-201ENST00000343958 ZANQ9Y493 2812 aa4.13□□□□□ -1.75
FGD6-201ENST00000343958 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
FGD6-201ENST00000343958 DCHS2Q6V1P9 2916 aa4.11□□□□□ -1.75
FGD6-201ENST00000343958 BSNQ9UPA5 3926 aa4.1□□□□□ -1.75
FGD6-201ENST00000343958 CELSR2Q9HCU4 2923 aa4.1□□□□□ -1.75
FGD6-201ENST00000343958 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
FGD6-201ENST00000343958 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.76
FGD6-201ENST00000343958 VPS13CQ709C8 3753 aa4.08□□□□□ -1.76
FGD6-201ENST00000343958 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
FGD6-201ENST00000343958 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
FGD6-201ENST00000343958 KRTAP3-2Q9BYR7 98 aa4.05□□□□□ -1.76
FGD6-201ENST00000343958 KMT2BQ9UMN6 2715 aaPredicted RBP4.04□□□□□ -1.76
FGD6-201ENST00000343958 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
FGD6-201ENST00000343958 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
FGD6-201ENST00000343958 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
FGD6-201ENST00000343958 FLG2Q5D862 2391 aaPredicted RBP4□□□□□ -1.77
FGD6-201ENST00000343958 DNAH9Q9NYC9 4486 aa3.99□□□□□ -1.77
FGD6-201ENST00000343958 NF1P21359 2839 aa3.99□□□□□ -1.77
FGD6-201ENST00000343958 TENM3Q9P273 2699 aa3.98□□□□□ -1.77
FGD6-201ENST00000343958 CELSR1Q9NYQ6 3014 aa3.98□□□□□ -1.77
FGD6-201ENST00000343958 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.78
FGD6-201ENST00000343958 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
FGD6-201ENST00000343958 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
FGD6-201ENST00000343958 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
FGD6-201ENST00000343958 MXRA5Q9NR99 2828 aa3.92□□□□□ -1.78
FGD6-201ENST00000343958 DNAH5Q8TE73 4624 aa3.92□□□□□ -1.78
FGD6-201ENST00000343958 LORP23490 312 aaPredicted RBP3.91□□□□□ -1.78
FGD6-201ENST00000343958 DYNC1H1Q14204 4646 aaKnown RBP3.91□□□□□ -1.78
FGD6-201ENST00000343958 PLECQ15149 4684 aaKnown RBP3.91□□□□□ -1.78
FGD6-201ENST00000343958 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
FGD6-201ENST00000343958 CSMD3Q7Z407 3707 aa3.89□□□□□ -1.79
FGD6-201ENST00000343958 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
FGD6-201ENST00000343958 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
FGD6-201ENST00000343958 TGP01266 2768 aa3.85□□□□□ -1.79
FGD6-201ENST00000343958 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
FGD6-201ENST00000343958 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
FGD6-201ENST00000343958 TENM1Q9UKZ4 2725 aa3.83□□□□□ -1.8
FGD6-201ENST00000343958 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms