RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
CARMIL3-201ENST00000342740 DMDP11532 3685 aa9.13□□□□□ -0.95
CARMIL3-201ENST00000342740 LINC01558Q9Y6Z2 57 aa9.1□□□□□ -0.95
CARMIL3-201ENST00000342740 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
CARMIL3-201ENST00000342740 Q5XG85 94 aa9.09□□□□□ -0.95
CARMIL3-201ENST00000342740 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
CARMIL3-201ENST00000342740 A0A1B0GU33 70 aa9.09□□□□□ -0.96
CARMIL3-201ENST00000342740 TENM1Q9UKZ4 2725 aa9.08□□□□□ -0.96
CARMIL3-201ENST00000342740 Q75L30 129 aa9.07□□□□□ -0.96
CARMIL3-201ENST00000342740 KRTAP13-1Q8IUC0 172 aa9.07□□□□□ -0.96
CARMIL3-201ENST00000342740 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
CARMIL3-201ENST00000342740 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
CARMIL3-201ENST00000342740 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
CARMIL3-201ENST00000342740 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
CARMIL3-201ENST00000342740 OXTP01178 125 aa9.02□□□□□ -0.97
CARMIL3-201ENST00000342740 PDZD2O15018 2839 aa9.01□□□□□ -0.97
CARMIL3-201ENST00000342740 CSAG1Q6PB30 78 aa9□□□□□ -0.97
CARMIL3-201ENST00000342740 PKD1L1Q8TDX9 2849 aa9□□□□□ -0.97
CARMIL3-201ENST00000342740 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
CARMIL3-201ENST00000342740 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
CARMIL3-201ENST00000342740 KRTAP13-2Q52LG2 175 aa8.98□□□□□ -0.97
CARMIL3-201ENST00000342740 Q5VV11 94 aa8.98□□□□□ -0.97
CARMIL3-201ENST00000342740 S4R3F8 94 aa8.97□□□□□ -0.97
CARMIL3-201ENST00000342740 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
CARMIL3-201ENST00000342740 FBN1P35555 2871 aaKnown RBP8.96□□□□□ -0.98
CARMIL3-201ENST00000342740 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
CARMIL3-201ENST00000342740 LCA10Q71F78 164 aa8.92□□□□□ -0.98
CARMIL3-201ENST00000342740 TENM2Q9NT68 2774 aa8.91□□□□□ -0.98
CARMIL3-201ENST00000342740 VWFP04275 2813 aa8.9□□□□□ -0.99
CARMIL3-201ENST00000342740 M0R2T5 61 aa8.89□□□□□ -0.99
CARMIL3-201ENST00000342740 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
CARMIL3-201ENST00000342740 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
CARMIL3-201ENST00000342740 TGP01266 2768 aa8.83□□□□□ -1
CARMIL3-201ENST00000342740 SMG1Q96Q15 3661 aaKnown RBP8.81□□□□□ -1
CARMIL3-201ENST00000342740 R4GN34 69 aa8.78□□□□□ -1
CARMIL3-201ENST00000342740 CSMD1Q96PZ7 3565 aa8.77□□□□□ -1.01
CARMIL3-201ENST00000342740 NBPF19A0A087WUL8 3843 aa8.75□□□□□ -1.01
CARMIL3-201ENST00000342740 ZFHX3Q15911 3703 aa8.74□□□□□ -1.01
CARMIL3-201ENST00000342740 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
CARMIL3-201ENST00000342740 PRAC1Q96KF2 57 aa8.68□□□□□ -1.02
CARMIL3-201ENST00000342740 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
CARMIL3-201ENST00000342740 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
CARMIL3-201ENST00000342740 SVEP1Q4LDE5 3571 aa8.65□□□□□ -1.03
CARMIL3-201ENST00000342740 M0QZ58 72 aa8.62□□□□□ -1.03
CARMIL3-201ENST00000342740 SPATA8Q6RVD6 105 aa8.62□□□□□ -1.03
CARMIL3-201ENST00000342740 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
CARMIL3-201ENST00000342740 CSMD2Q7Z408 3487 aa8.59□□□□□ -1.03
CARMIL3-201ENST00000342740 A8MUU9 505 aa8.57□□□□□ -1.04
CARMIL3-201ENST00000342740 CUBNO60494 3623 aa8.55□□□□□ -1.04
CARMIL3-201ENST00000342740 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
CARMIL3-201ENST00000342740 SPENQ96T58 3664 aaKnown RBP8.52□□□□□ -1.05
CARMIL3-201ENST00000342740 SRRM2Q9UQ35 2752 aaKnown RBP8.49□□□□□ -1.05
CARMIL3-201ENST00000342740 ROMO1P60602 79 aa8.49□□□□□ -1.05
CARMIL3-201ENST00000342740 LUZP6Q538Z0 58 aa8.44□□□□□ -1.06
CARMIL3-201ENST00000342740 A8MU10 97 aa8.42□□□□□ -1.06
CARMIL3-201ENST00000342740 XP32Q5T750 250 aa8.37□□□□□ -1.07
CARMIL3-201ENST00000342740 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
CARMIL3-201ENST00000342740 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.08
CARMIL3-201ENST00000342740 FBN3Q75N90 2809 aa8.33□□□□□ -1.08
CARMIL3-201ENST00000342740 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
CARMIL3-201ENST00000342740 BSNQ9UPA5 3926 aa8.32□□□□□ -1.08
CARMIL3-201ENST00000342740 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
CARMIL3-201ENST00000342740 A6NN06 94 aa8.3□□□□□ -1.08
CARMIL3-201ENST00000342740 A0A1B0GVY2 172 aa8.27□□□□□ -1.08
CARMIL3-201ENST00000342740 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
CARMIL3-201ENST00000342740 MEGF8Q7Z7M0 2845 aa8.19□□□□□ -1.1
CARMIL3-201ENST00000342740 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
CARMIL3-201ENST00000342740 KRTAP10-8P60410 259 aa8.18□□□□□ -1.1
CARMIL3-201ENST00000342740 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
CARMIL3-201ENST00000342740 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
CARMIL3-201ENST00000342740 H0YAA0 97 aa8□□□□□ -1.13
CARMIL3-201ENST00000342740 TNP1P09430 55 aa7.93□□□□□ -1.14
CARMIL3-201ENST00000342740 P0C880 135 aa7.93□□□□□ -1.14
CARMIL3-201ENST00000342740 VPS13CQ709C8 3753 aa7.91□□□□□ -1.14
CARMIL3-201ENST00000342740 H3BS24 57 aa7.89□□□□□ -1.15
CARMIL3-201ENST00000342740 A0A0A0MQY5 61 aa7.87□□□□□ -1.15
CARMIL3-201ENST00000342740 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
CARMIL3-201ENST00000342740 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
CARMIL3-201ENST00000342740 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
CARMIL3-201ENST00000342740 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
CARMIL3-201ENST00000342740 HUWE1Q7Z6Z7 4374 aaKnown RBP7.73□□□□□ -1.17
CARMIL3-201ENST00000342740 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
CARMIL3-201ENST00000342740 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
CARMIL3-201ENST00000342740 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
CARMIL3-201ENST00000342740 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
CARMIL3-201ENST00000342740 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
CARMIL3-201ENST00000342740 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
CARMIL3-201ENST00000342740 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
CARMIL3-201ENST00000342740 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CARMIL3-201ENST00000342740 DNAH9Q9NYC9 4486 aa7.47□□□□□ -1.21
CARMIL3-201ENST00000342740 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
CARMIL3-201ENST00000342740 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
CARMIL3-201ENST00000342740 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
CARMIL3-201ENST00000342740 DNHD1Q96M86 4753 aa7.39□□□□□ -1.23
CARMIL3-201ENST00000342740 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
CARMIL3-201ENST00000342740 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
CARMIL3-201ENST00000342740 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
CARMIL3-201ENST00000342740 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
CARMIL3-201ENST00000342740 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
CARMIL3-201ENST00000342740 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms