RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 NDUFB1O75438 58 aa9.76□□□□□ -0.85
FRMD4A-202ENST00000342409 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
FRMD4A-202ENST00000342409 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
FRMD4A-202ENST00000342409 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
FRMD4A-202ENST00000342409 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
FRMD4A-202ENST00000342409 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
FRMD4A-202ENST00000342409 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
FRMD4A-202ENST00000342409 COX7CP15954 63 aa9.73□□□□□ -0.85
FRMD4A-202ENST00000342409 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
FRMD4A-202ENST00000342409 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
FRMD4A-202ENST00000342409 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
FRMD4A-202ENST00000342409 C8orf17Q9NRJ1 99 aa9.73□□□□□ -0.85
FRMD4A-202ENST00000342409 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
FRMD4A-202ENST00000342409 CASC2Q6XLA1 102 aa9.71□□□□□ -0.85
FRMD4A-202ENST00000342409 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
FRMD4A-202ENST00000342409 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
FRMD4A-202ENST00000342409 UQCRQO14949 82 aa9.68□□□□□ -0.86
FRMD4A-202ENST00000342409 KRTAP4-5Q9BYR2 181 aa9.68□□□□□ -0.86
FRMD4A-202ENST00000342409 hDV103S1A0JD37 113 aa9.67□□□□□ -0.86
FRMD4A-202ENST00000342409 MT1HL1P0DM35 61 aa9.63□□□□□ -0.87
FRMD4A-202ENST00000342409 HERC2O95714 4834 aa9.61□□□□□ -0.87
FRMD4A-202ENST00000342409 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
FRMD4A-202ENST00000342409 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
FRMD4A-202ENST00000342409 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
FRMD4A-202ENST00000342409 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
FRMD4A-202ENST00000342409 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
FRMD4A-202ENST00000342409 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
FRMD4A-202ENST00000342409 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
FRMD4A-202ENST00000342409 LINC00313P59037 77 aa9.57□□□□□ -0.88
FRMD4A-202ENST00000342409 C20orf197Q8N268 126 aa9.57□□□□□ -0.88
FRMD4A-202ENST00000342409 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
FRMD4A-202ENST00000342409 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
FRMD4A-202ENST00000342409 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
FRMD4A-202ENST00000342409 KLKP1Q107X0 134 aa9.51□□□□□ -0.89
FRMD4A-202ENST00000342409 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
FRMD4A-202ENST00000342409 OXTP01178 125 aa9.48□□□□□ -0.89
FRMD4A-202ENST00000342409 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
FRMD4A-202ENST00000342409 NDUFS5O43920 106 aa9.48□□□□□ -0.89
FRMD4A-202ENST00000342409 TP53AIP1Q9HCN2 124 aa9.47□□□□□ -0.89
FRMD4A-202ENST00000342409 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.89
FRMD4A-202ENST00000342409 H0Y9P7 68 aa9.45□□□□□ -0.9
FRMD4A-202ENST00000342409 Q5W150 140 aa9.45□□□□□ -0.9
FRMD4A-202ENST00000342409 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
FRMD4A-202ENST00000342409 TRAV22A0A0B4J277 110 aa9.42□□□□□ -0.9
FRMD4A-202ENST00000342409 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
FRMD4A-202ENST00000342409 H7BZZ5 65 aa9.42□□□□□ -0.9
FRMD4A-202ENST00000342409 MP68P56378 58 aa9.39□□□□□ -0.91
FRMD4A-202ENST00000342409 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
FRMD4A-202ENST00000342409 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
FRMD4A-202ENST00000342409 H3BPC8 53 aa9.36□□□□□ -0.91
FRMD4A-202ENST00000342409 C1orf64Q8NEQ6 169 aa9.35□□□□□ -0.91
FRMD4A-202ENST00000342409 A8MUU9 505 aa9.33□□□□□ -0.92
FRMD4A-202ENST00000342409 NDUFC1O43677 76 aa9.33□□□□□ -0.92
FRMD4A-202ENST00000342409 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
FRMD4A-202ENST00000342409 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
FRMD4A-202ENST00000342409 TMEM258P61165 79 aa9.31□□□□□ -0.92
FRMD4A-202ENST00000342409 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
FRMD4A-202ENST00000342409 FAM236DA0A1B0GTK5 79 aa9.22□□□□□ -0.93
FRMD4A-202ENST00000342409 FAM236CP0DP71 79 aa9.22□□□□□ -0.93
FRMD4A-202ENST00000342409 PRR4Q16378 134 aa9.22□□□□□ -0.93
FRMD4A-202ENST00000342409 Q75L30 129 aa9.22□□□□□ -0.93
FRMD4A-202ENST00000342409 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
FRMD4A-202ENST00000342409 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.93
FRMD4A-202ENST00000342409 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
FRMD4A-202ENST00000342409 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
FRMD4A-202ENST00000342409 XP32Q5T750 250 aa9.2□□□□□ -0.94
FRMD4A-202ENST00000342409 J3QL48 77 aa9.19□□□□□ -0.94
FRMD4A-202ENST00000342409 LPAP08519 4548 aa9.18□□□□□ -0.94
FRMD4A-202ENST00000342409 LRP2P98164 4655 aa9.15□□□□□ -0.95
FRMD4A-202ENST00000342409 RPL37P61927 97 aaKnown RBP9.14□□□□□ -0.95
FRMD4A-202ENST00000342409 TPRXLQ17RH7 258 aa9.14□□□□□ -0.95
FRMD4A-202ENST00000342409 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
FRMD4A-202ENST00000342409 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
FRMD4A-202ENST00000342409 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
FRMD4A-202ENST00000342409 HRES1P13985 223 aa9.08□□□□□ -0.96
FRMD4A-202ENST00000342409 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
FRMD4A-202ENST00000342409 ATP11AUNQ6ZP68 121 aa9.03□□□□□ -0.96
FRMD4A-202ENST00000342409 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
FRMD4A-202ENST00000342409 RPS28P62857 69 aaKnown RBP9.02□□□□□ -0.96
FRMD4A-202ENST00000342409 HERC1Q15751 4861 aa9.02□□□□□ -0.97
FRMD4A-202ENST00000342409 SPINK7P58062 85 aa9□□□□□ -0.97
FRMD4A-202ENST00000342409 DMAC1Q96GE9 116 aa8.94□□□□□ -0.98
FRMD4A-202ENST00000342409 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
FRMD4A-202ENST00000342409 C4orf26Q17RF5 130 aa8.91□□□□□ -0.98
FRMD4A-202ENST00000342409 COA5Q86WW8 74 aa8.89□□□□□ -0.99
FRMD4A-202ENST00000342409 MUC17Q685J3 4493 aa8.87□□□□□ -0.99
FRMD4A-202ENST00000342409 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
FRMD4A-202ENST00000342409 ACYP2P14621 99 aa8.83□□□□□ -1
FRMD4A-202ENST00000342409 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
FRMD4A-202ENST00000342409 SMIM26A0A096LP01 95 aa8.78□□□□□ -1
FRMD4A-202ENST00000342409 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1
FRMD4A-202ENST00000342409 A8MUN3 132 aa8.77□□□□□ -1.01
FRMD4A-202ENST00000342409 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
FRMD4A-202ENST00000342409 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
FRMD4A-202ENST00000342409 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
FRMD4A-202ENST00000342409 Q1T7F1 81 aa8.63□□□□□ -1.03
FRMD4A-202ENST00000342409 MUC2Q02817 5179 aa8.57□□□□□ -1.04
FRMD4A-202ENST00000342409 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
FRMD4A-202ENST00000342409 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
FRMD4A-202ENST00000342409 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms