RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 A0A1W2PPM0 123 aa11.76□□□□□ -0.53
PBX1-201ENST00000340699 C14orf132Q9NPU4 83 aa11.76□□□□□ -0.53
PBX1-201ENST00000340699 NOTCH2NLQ7Z3S9 236 aa11.74□□□□□ -0.53
PBX1-201ENST00000340699 A0A1B0GVX0 72 aa11.73□□□□□ -0.53
PBX1-201ENST00000340699 KRTAP16-1A8MUX0 517 aa11.73□□□□□ -0.53
PBX1-201ENST00000340699 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
PBX1-201ENST00000340699 MT1HP80294 61 aa11.71□□□□□ -0.53
PBX1-201ENST00000340699 H3BT86 120 aa11.7□□□□□ -0.54
PBX1-201ENST00000340699 NDUFB1O75438 58 aa11.69□□□□□ -0.54
PBX1-201ENST00000340699 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
PBX1-201ENST00000340699 KRTAP9-2Q9BYQ4 174 aa11.65□□□□□ -0.54
PBX1-201ENST00000340699 NREPQ16612 68 aa11.62□□□□□ -0.55
PBX1-201ENST00000340699 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
PBX1-201ENST00000340699 COL5A1-AS1Q5SY13 56 aa11.61□□□□□ -0.55
PBX1-201ENST00000340699 A8MWP4 228 aa11.6□□□□□ -0.55
PBX1-201ENST00000340699 M0R2T5 61 aa11.6□□□□□ -0.55
PBX1-201ENST00000340699 C8orf17Q9NRJ1 99 aa11.54□□□□□ -0.56
PBX1-201ENST00000340699 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
PBX1-201ENST00000340699 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
PBX1-201ENST00000340699 ZCCHC13Q8WW36 166 aaKnown RBP11.48□□□□□ -0.57
PBX1-201ENST00000340699 KRTAP10-6P60371 365 aaPredicted RBP11.47□□□□□ -0.57
PBX1-201ENST00000340699 Q8N9P0 234 aaPredicted RBP11.47□□□□□ -0.57
PBX1-201ENST00000340699 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
PBX1-201ENST00000340699 Q6ZVQ6 151 aa11.45□□□□□ -0.58
PBX1-201ENST00000340699 K7EP34 96 aa11.44□□□□□ -0.58
PBX1-201ENST00000340699 PCP4L1A6NKN8 68 aa11.43□□□□□ -0.58
PBX1-201ENST00000340699 LORP23490 312 aaPredicted RBP11.43□□□□□ -0.58
PBX1-201ENST00000340699 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
PBX1-201ENST00000340699 FAM236DA0A1B0GTK5 79 aa11.42□□□□□ -0.58
PBX1-201ENST00000340699 BPY2O14599 106 aa11.42□□□□□ -0.58
PBX1-201ENST00000340699 FAM236CP0DP71 79 aa11.42□□□□□ -0.58
PBX1-201ENST00000340699 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
PBX1-201ENST00000340699 FLGP20930 4061 aaPredicted RBP11.4□□□□□ -0.58
PBX1-201ENST00000340699 HRES1P13985 223 aa11.39□□□□□ -0.59
PBX1-201ENST00000340699 PRO0461Q9UI25 63 aa11.39□□□□□ -0.59
PBX1-201ENST00000340699 K7EQZ3 153 aa11.38□□□□□ -0.59
PBX1-201ENST00000340699 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
PBX1-201ENST00000340699 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
PBX1-201ENST00000340699 TMEM254Q8TBM7 123 aa11.37□□□□□ -0.59
PBX1-201ENST00000340699 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
PBX1-201ENST00000340699 SPINK7P58062 85 aa11.35□□□□□ -0.59
PBX1-201ENST00000340699 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
PBX1-201ENST00000340699 MPLKIPQ8TAP9 179 aa11.34□□□□□ -0.59
PBX1-201ENST00000340699 NDUFS5O43920 106 aa11.3□□□□□ -0.6
PBX1-201ENST00000340699 UBL5Q9BZL1 73 aa11.29□□□□□ -0.6
PBX1-201ENST00000340699 F8W1H4 67 aa11.27□□□□□ -0.61
PBX1-201ENST00000340699 LINC00846Q9NV44 126 aa11.26□□□□□ -0.61
PBX1-201ENST00000340699 Q8N9L7 120 aa11.24□□□□□ -0.61
PBX1-201ENST00000340699 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
PBX1-201ENST00000340699 KRTAP9-6A0A140TA67 174 aa11.21□□□□□ -0.61
PBX1-201ENST00000340699 CASC2Q6XLA1 102 aa11.21□□□□□ -0.61
PBX1-201ENST00000340699 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
PBX1-201ENST00000340699 HCG22E2RYF7 251 aa11.13□□□□□ -0.63
PBX1-201ENST00000340699 KRTAP9-8Q9BYQ0 159 aa11.09□□□□□ -0.63
PBX1-201ENST00000340699 Q5W150 140 aa11.08□□□□□ -0.64
PBX1-201ENST00000340699 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
PBX1-201ENST00000340699 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
PBX1-201ENST00000340699 CXCL6P80162 114 aa11.06□□□□□ -0.64
PBX1-201ENST00000340699 CRCT1Q9UGL9 99 aa11.05□□□□□ -0.64
PBX1-201ENST00000340699 C7orf65Q6ZTY9 151 aa11.04□□□□□ -0.64
PBX1-201ENST00000340699 FSIP2Q5CZC0 6907 aa11□□□□□ -0.65
PBX1-201ENST00000340699 MT2AP02795 61 aa10.96□□□□□ -0.65
PBX1-201ENST00000340699 ACYP1P07311 99 aa10.96□□□□□ -0.65
PBX1-201ENST00000340699 H1FX-AS1Q4G0G2 97 aa10.94□□□□□ -0.66
PBX1-201ENST00000340699 TP53AIP1Q9HCN2 124 aa10.91□□□□□ -0.66
PBX1-201ENST00000340699 KRTAP10-10P60014 251 aa10.89□□□□□ -0.67
PBX1-201ENST00000340699 FAM240AA0A1B0GVK7 77 aa10.87□□□□□ -0.67
PBX1-201ENST00000340699 MT1FP04733 61 aa10.87□□□□□ -0.67
PBX1-201ENST00000340699 C4orf26Q17RF5 130 aa10.84□□□□□ -0.67
PBX1-201ENST00000340699 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
PBX1-201ENST00000340699 A0A1B0GV90 55 aa10.77□□□□□ -0.69
PBX1-201ENST00000340699 HIST1H4AP62805 103 aaKnown RBP10.76□□□□□ -0.69
PBX1-201ENST00000340699 KRTAP9-3Q9BYQ3 159 aa10.74□□□□□ -0.69
PBX1-201ENST00000340699 LINC00643Q86TS7 51 aa10.68□□□□□ -0.7
PBX1-201ENST00000340699 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
PBX1-201ENST00000340699 TRAV22A0A0B4J277 110 aa10.66□□□□□ -0.7
PBX1-201ENST00000340699 LCE2BO14633 110 aa10.64□□□□□ -0.71
PBX1-201ENST00000340699 USH2AO75445 5202 aa10.64□□□□□ -0.71
PBX1-201ENST00000340699 KRTAP3-1Q9BYR8 98 aa10.63□□□□□ -0.71
PBX1-201ENST00000340699 CYP4F30PQ9H0H9 118 aa10.63□□□□□ -0.71
PBX1-201ENST00000340699 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
PBX1-201ENST00000340699 UQCRQO14949 82 aa10.6□□□□□ -0.71
PBX1-201ENST00000340699 S4R3F8 94 aa10.6□□□□□ -0.71
PBX1-201ENST00000340699 A0A087WVE0 104 aa10.57□□□□□ -0.72
PBX1-201ENST00000340699 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
PBX1-201ENST00000340699 J3QR89 54 aa10.56□□□□□ -0.72
PBX1-201ENST00000340699 ATOX1O00244 68 aa10.54□□□□□ -0.72
PBX1-201ENST00000340699 H0Y9P7 68 aa10.53□□□□□ -0.72
PBX1-201ENST00000340699 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
PBX1-201ENST00000340699 LCA10Q71F78 164 aa10.5□□□□□ -0.73
PBX1-201ENST00000340699 SSPOA2VEC9 5147 aa10.49□□□□□ -0.73
PBX1-201ENST00000340699 FAM236AA0A1B0GUQ0 79 aa10.43□□□□□ -0.74
PBX1-201ENST00000340699 FAM236BA0A1B0GV22 79 aa10.43□□□□□ -0.74
PBX1-201ENST00000340699 KRTAP19-1Q8IUB9 90 aa10.42□□□□□ -0.74
PBX1-201ENST00000340699 MP68P56378 58 aa10.38□□□□□ -0.75
PBX1-201ENST00000340699 LINC00208Q96KT6 92 aa10.38□□□□□ -0.75
PBX1-201ENST00000340699 OCR1Q9BZK8 76 aa10.37□□□□□ -0.75
PBX1-201ENST00000340699 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
PBX1-201ENST00000340699 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
PBX1-201ENST00000340699 A8MUN3 132 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms