RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 A0A1B0GVX0 72 aa7.53□□□□□ -1.2
ERCC1-203ENST00000340192 M0R2T5 61 aa7.53□□□□□ -1.2
ERCC1-203ENST00000340192 J3KT08 172 aa7.51□□□□□ -1.21
ERCC1-203ENST00000340192 C14orf132Q9NPU4 83 aa7.51□□□□□ -1.21
ERCC1-203ENST00000340192 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
ERCC1-203ENST00000340192 PDE6GP18545 87 aa7.5□□□□□ -1.21
ERCC1-203ENST00000340192 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
ERCC1-203ENST00000340192 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
ERCC1-203ENST00000340192 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
ERCC1-203ENST00000340192 A0A1B0GW54 56 aa7.49□□□□□ -1.21
ERCC1-203ENST00000340192 C9orf118A6NHY6 69 aa7.49□□□□□ -1.21
ERCC1-203ENST00000340192 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
ERCC1-203ENST00000340192 A0A1W2PPM0 123 aa7.47□□□□□ -1.21
ERCC1-203ENST00000340192 NDUFB1O75438 58 aa7.44□□□□□ -1.22
ERCC1-203ENST00000340192 H3BT86 120 aa7.43□□□□□ -1.22
ERCC1-203ENST00000340192 MTURNQ8N3F0 131 aa7.43□□□□□ -1.22
ERCC1-203ENST00000340192 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
ERCC1-203ENST00000340192 A8MWP4 228 aa7.42□□□□□ -1.22
ERCC1-203ENST00000340192 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
ERCC1-203ENST00000340192 NREPQ16612 68 aa7.4□□□□□ -1.22
ERCC1-203ENST00000340192 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
ERCC1-203ENST00000340192 HRES1P13985 223 aa7.38□□□□□ -1.23
ERCC1-203ENST00000340192 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
ERCC1-203ENST00000340192 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
ERCC1-203ENST00000340192 FAM236DA0A1B0GTK5 79 aa7.36□□□□□ -1.23
ERCC1-203ENST00000340192 FAM236CP0DP71 79 aa7.36□□□□□ -1.23
ERCC1-203ENST00000340192 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
ERCC1-203ENST00000340192 MPLKIPQ8TAP9 179 aa7.36□□□□□ -1.23
ERCC1-203ENST00000340192 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
ERCC1-203ENST00000340192 RBM12B-AS1Q9P1G2 102 aa7.35□□□□□ -1.23
ERCC1-203ENST00000340192 Q6ZVQ6 151 aa7.34□□□□□ -1.23
ERCC1-203ENST00000340192 COL5A1-AS1Q5SY13 56 aa7.32□□□□□ -1.24
ERCC1-203ENST00000340192 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
ERCC1-203ENST00000340192 MMP24-AS1A0A0U1RRL7 71 aa7.3□□□□□ -1.24
ERCC1-203ENST00000340192 K7EQZ3 153 aa7.3□□□□□ -1.24
ERCC1-203ENST00000340192 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
ERCC1-203ENST00000340192 SPINK7P58062 85 aa7.3□□□□□ -1.24
ERCC1-203ENST00000340192 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
ERCC1-203ENST00000340192 BPY2O14599 106 aa7.27□□□□□ -1.25
ERCC1-203ENST00000340192 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
ERCC1-203ENST00000340192 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
ERCC1-203ENST00000340192 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
ERCC1-203ENST00000340192 PRO0461Q9UI25 63 aa7.25□□□□□ -1.25
ERCC1-203ENST00000340192 K7EP34 96 aa7.24□□□□□ -1.25
ERCC1-203ENST00000340192 NDUFS5O43920 106 aa7.21□□□□□ -1.26
ERCC1-203ENST00000340192 Q8N9L7 120 aa7.21□□□□□ -1.26
ERCC1-203ENST00000340192 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
ERCC1-203ENST00000340192 PCP4L1A6NKN8 68 aa7.18□□□□□ -1.26
ERCC1-203ENST00000340192 LINC00846Q9NV44 126 aa7.17□□□□□ -1.26
ERCC1-203ENST00000340192 MT2AP02795 61 aa7.16□□□□□ -1.26
ERCC1-203ENST00000340192 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
ERCC1-203ENST00000340192 GTF2H5Q6ZYL4 71 aa7.16□□□□□ -1.26
ERCC1-203ENST00000340192 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
ERCC1-203ENST00000340192 Q5W150 140 aa7.13□□□□□ -1.27
ERCC1-203ENST00000340192 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
ERCC1-203ENST00000340192 F8W1H4 67 aa7.11□□□□□ -1.27
ERCC1-203ENST00000340192 MT1FP04733 61 aa7.11□□□□□ -1.27
ERCC1-203ENST00000340192 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
ERCC1-203ENST00000340192 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
ERCC1-203ENST00000340192 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
ERCC1-203ENST00000340192 ETDBQ3ZM63 59 aa7.08□□□□□ -1.28
ERCC1-203ENST00000340192 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
ERCC1-203ENST00000340192 CXCL6P80162 114 aa7.06□□□□□ -1.28
ERCC1-203ENST00000340192 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
ERCC1-203ENST00000340192 USH2AO75445 5202 aa7.04□□□□□ -1.28
ERCC1-203ENST00000340192 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
ERCC1-203ENST00000340192 LCE2BO14633 110 aa6.99□□□□□ -1.29
ERCC1-203ENST00000340192 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
ERCC1-203ENST00000340192 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
ERCC1-203ENST00000340192 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
ERCC1-203ENST00000340192 ACYP1P07311 99 aa6.91□□□□□ -1.3
ERCC1-203ENST00000340192 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
ERCC1-203ENST00000340192 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
ERCC1-203ENST00000340192 ATP5EP2Q5VTU8 51 aa6.85□□□□□ -1.31
ERCC1-203ENST00000340192 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
ERCC1-203ENST00000340192 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
ERCC1-203ENST00000340192 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
ERCC1-203ENST00000340192 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
ERCC1-203ENST00000340192 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
ERCC1-203ENST00000340192 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
ERCC1-203ENST00000340192 S4R3F8 94 aa6.81□□□□□ -1.32
ERCC1-203ENST00000340192 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
ERCC1-203ENST00000340192 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
ERCC1-203ENST00000340192 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
ERCC1-203ENST00000340192 A0A1B0GV90 55 aa6.78□□□□□ -1.32
ERCC1-203ENST00000340192 LCA10Q71F78 164 aa6.78□□□□□ -1.32
ERCC1-203ENST00000340192 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
ERCC1-203ENST00000340192 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
ERCC1-203ENST00000340192 LINC00643Q86TS7 51 aa6.74□□□□□ -1.33
ERCC1-203ENST00000340192 A0A087WVE0 104 aa6.73□□□□□ -1.33
ERCC1-203ENST00000340192 UQCRQO14949 82 aa6.73□□□□□ -1.33
ERCC1-203ENST00000340192 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
ERCC1-203ENST00000340192 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
ERCC1-203ENST00000340192 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
ERCC1-203ENST00000340192 H0Y9P7 68 aa6.71□□□□□ -1.34
ERCC1-203ENST00000340192 ATOX1O00244 68 aa6.69□□□□□ -1.34
ERCC1-203ENST00000340192 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
ERCC1-203ENST00000340192 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
ERCC1-203ENST00000340192 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
ERCC1-203ENST00000340192 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms