RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
TRAF3IP2-201ENST00000340026 C8orf87E5RJ46 101 aa6.29□□□□□ -1.4
TRAF3IP2-201ENST00000340026 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
TRAF3IP2-201ENST00000340026 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
TRAF3IP2-201ENST00000340026 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
TRAF3IP2-201ENST00000340026 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
TRAF3IP2-201ENST00000340026 C1orf64Q8NEQ6 169 aa6.28□□□□□ -1.4
TRAF3IP2-201ENST00000340026 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
TRAF3IP2-201ENST00000340026 HYDINQ4G0P3 5121 aa6.27□□□□□ -1.41
TRAF3IP2-201ENST00000340026 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
TRAF3IP2-201ENST00000340026 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
TRAF3IP2-201ENST00000340026 FAM229AH3BQW9 127 aa6.24□□□□□ -1.41
TRAF3IP2-201ENST00000340026 Q1T7F1 81 aa6.24□□□□□ -1.41
TRAF3IP2-201ENST00000340026 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
TRAF3IP2-201ENST00000340026 SACSQ9NZJ4 4579 aa6.23□□□□□ -1.41
TRAF3IP2-201ENST00000340026 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
TRAF3IP2-201ENST00000340026 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
TRAF3IP2-201ENST00000340026 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
TRAF3IP2-201ENST00000340026 A0A087X002 238 aa6.21□□□□□ -1.42
TRAF3IP2-201ENST00000340026 LINC00336Q6ZUF6 198 aa6.21□□□□□ -1.42
TRAF3IP2-201ENST00000340026 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
TRAF3IP2-201ENST00000340026 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
TRAF3IP2-201ENST00000340026 C1orf195Q5TG92 126 aa6.19□□□□□ -1.42
TRAF3IP2-201ENST00000340026 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
TRAF3IP2-201ENST00000340026 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
TRAF3IP2-201ENST00000340026 V9GYY9 64 aa6.19□□□□□ -1.42
TRAF3IP2-201ENST00000340026 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
TRAF3IP2-201ENST00000340026 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
TRAF3IP2-201ENST00000340026 NDUFS5O43920 106 aa6.15□□□□□ -1.43
TRAF3IP2-201ENST00000340026 SPINK1P00995 79 aa6.15□□□□□ -1.43
TRAF3IP2-201ENST00000340026 LINC00313P59037 77 aa6.15□□□□□ -1.43
TRAF3IP2-201ENST00000340026 DYNC1H1Q14204 4646 aaKnown RBP6.14□□□□□ -1.43
TRAF3IP2-201ENST00000340026 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
TRAF3IP2-201ENST00000340026 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PRR4Q16378 134 aa6.12□□□□□ -1.43
TRAF3IP2-201ENST00000340026 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
TRAF3IP2-201ENST00000340026 Q5W150 140 aa6.11□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PKHD1P08F94 4074 aa6.11□□□□□ -1.43
TRAF3IP2-201ENST00000340026 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PLA2G1BP04054 148 aaKnown RBP6.1□□□□□ -1.43
TRAF3IP2-201ENST00000340026 COA5Q86WW8 74 aa6.1□□□□□ -1.43
TRAF3IP2-201ENST00000340026 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
TRAF3IP2-201ENST00000340026 TYMSOSQ8TAI1 123 aa6.09□□□□□ -1.43
TRAF3IP2-201ENST00000340026 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
TRAF3IP2-201ENST00000340026 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
TRAF3IP2-201ENST00000340026 IGKV2-30P06310 120 aa6.06□□□□□ -1.44
TRAF3IP2-201ENST00000340026 KRTAP10-4P60372 401 aaPredicted RBP6.05□□□□□ -1.44
TRAF3IP2-201ENST00000340026 RYR2Q92736 4967 aa6.04□□□□□ -1.44
TRAF3IP2-201ENST00000340026 HRES1P13985 223 aa6.03□□□□□ -1.44
TRAF3IP2-201ENST00000340026 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
TRAF3IP2-201ENST00000340026 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
TRAF3IP2-201ENST00000340026 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
TRAF3IP2-201ENST00000340026 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
TRAF3IP2-201ENST00000340026 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
TRAF3IP2-201ENST00000340026 Q5VV11 94 aa6.01□□□□□ -1.45
TRAF3IP2-201ENST00000340026 ACYP2P14621 99 aa6.01□□□□□ -1.45
TRAF3IP2-201ENST00000340026 Q75L30 129 aa6□□□□□ -1.45
TRAF3IP2-201ENST00000340026 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
TRAF3IP2-201ENST00000340026 A8MUN3 132 aa5.98□□□□□ -1.45
TRAF3IP2-201ENST00000340026 PSPHP1O15172 72 aa5.96□□□□□ -1.45
TRAF3IP2-201ENST00000340026 FAT1Q14517 4588 aa5.94□□□□□ -1.46
TRAF3IP2-201ENST00000340026 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
TRAF3IP2-201ENST00000340026 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
TRAF3IP2-201ENST00000340026 A8MUU9 505 aa5.92□□□□□ -1.46
TRAF3IP2-201ENST00000340026 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.47
TRAF3IP2-201ENST00000340026 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.47
TRAF3IP2-201ENST00000340026 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
TRAF3IP2-201ENST00000340026 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
TRAF3IP2-201ENST00000340026 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
TRAF3IP2-201ENST00000340026 TNXBP22105 4242 aa5.85□□□□□ -1.47
TRAF3IP2-201ENST00000340026 RETNLBQ9BQ08 111 aa5.85□□□□□ -1.47
TRAF3IP2-201ENST00000340026 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
TRAF3IP2-201ENST00000340026 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
TRAF3IP2-201ENST00000340026 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
TRAF3IP2-201ENST00000340026 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
TRAF3IP2-201ENST00000340026 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
TRAF3IP2-201ENST00000340026 HSPG2P98160 4391 aa5.82□□□□□ -1.48
TRAF3IP2-201ENST00000340026 A6NED7 52 aa5.81□□□□□ -1.48
TRAF3IP2-201ENST00000340026 LCA10Q71F78 164 aa5.81□□□□□ -1.48
TRAF3IP2-201ENST00000340026 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
TRAF3IP2-201ENST00000340026 RYR1P21817 5038 aa5.77□□□□□ -1.49
TRAF3IP2-201ENST00000340026 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
TRAF3IP2-201ENST00000340026 A0A1B0GU69 56 aa5.75□□□□□ -1.49
TRAF3IP2-201ENST00000340026 SPINK7P58062 85 aa5.75□□□□□ -1.49
TRAF3IP2-201ENST00000340026 Q8N1X5 172 aa5.74□□□□□ -1.49
TRAF3IP2-201ENST00000340026 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
TRAF3IP2-201ENST00000340026 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
TRAF3IP2-201ENST00000340026 Q5VSD8 79 aa5.73□□□□□ -1.49
TRAF3IP2-201ENST00000340026 A8MU10 97 aa5.73□□□□□ -1.49
TRAF3IP2-201ENST00000340026 RYR3Q15413 4870 aa5.71□□□□□ -1.5
TRAF3IP2-201ENST00000340026 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
TRAF3IP2-201ENST00000340026 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
TRAF3IP2-201ENST00000340026 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
TRAF3IP2-201ENST00000340026 A6NN06 94 aa5.68□□□□□ -1.5
TRAF3IP2-201ENST00000340026 UQCR11O14957 56 aa5.67□□□□□ -1.5
TRAF3IP2-201ENST00000340026 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
TRAF3IP2-201ENST00000340026 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
TRAF3IP2-201ENST00000340026 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms