RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
CDK5RAP1-201ENST00000339269 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
CDK5RAP1-201ENST00000339269 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
CDK5RAP1-201ENST00000339269 Q6ZSA8 131 aa7.68□□□□□ -1.18
CDK5RAP1-201ENST00000339269 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
CDK5RAP1-201ENST00000339269 NDUFS5O43920 106 aa7.68□□□□□ -1.18
CDK5RAP1-201ENST00000339269 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
CDK5RAP1-201ENST00000339269 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
CDK5RAP1-201ENST00000339269 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
CDK5RAP1-201ENST00000339269 DYNC1H1Q14204 4646 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP1-201ENST00000339269 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
CDK5RAP1-201ENST00000339269 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
CDK5RAP1-201ENST00000339269 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
CDK5RAP1-201ENST00000339269 A0A087X002 238 aa7.61□□□□□ -1.19
CDK5RAP1-201ENST00000339269 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
CDK5RAP1-201ENST00000339269 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
CDK5RAP1-201ENST00000339269 H0Y9P7 68 aa7.6□□□□□ -1.19
CDK5RAP1-201ENST00000339269 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
CDK5RAP1-201ENST00000339269 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
CDK5RAP1-201ENST00000339269 NDUFB1O75438 58 aa7.6□□□□□ -1.19
CDK5RAP1-201ENST00000339269 Q1T7F1 81 aa7.59□□□□□ -1.19
CDK5RAP1-201ENST00000339269 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
CDK5RAP1-201ENST00000339269 MP68P56378 58 aa7.58□□□□□ -1.2
CDK5RAP1-201ENST00000339269 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
CDK5RAP1-201ENST00000339269 IGHV6-1A0A0B4J1U7 121 aa7.56□□□□□ -1.2
CDK5RAP1-201ENST00000339269 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
CDK5RAP1-201ENST00000339269 H3BPC8 53 aa7.55□□□□□ -1.2
CDK5RAP1-201ENST00000339269 KIAA1109Q2LD37 5005 aa7.55□□□□□ -1.2
CDK5RAP1-201ENST00000339269 KRTAP1-4P0C5Y4 121 aa7.54□□□□□ -1.2
CDK5RAP1-201ENST00000339269 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
CDK5RAP1-201ENST00000339269 C1orf64Q8NEQ6 169 aa7.54□□□□□ -1.2
CDK5RAP1-201ENST00000339269 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP1-201ENST00000339269 PRR4Q16378 134 aa7.53□□□□□ -1.2
CDK5RAP1-201ENST00000339269 LCA10Q71F78 164 aa7.53□□□□□ -1.2
CDK5RAP1-201ENST00000339269 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP1-201ENST00000339269 RYR1P21817 5038 aa7.5□□□□□ -1.21
CDK5RAP1-201ENST00000339269 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
CDK5RAP1-201ENST00000339269 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
CDK5RAP1-201ENST00000339269 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
CDK5RAP1-201ENST00000339269 HSPG2P98160 4391 aa7.48□□□□□ -1.21
CDK5RAP1-201ENST00000339269 CDK2AP2O75956 126 aa7.48□□□□□ -1.21
CDK5RAP1-201ENST00000339269 A8MUN3 132 aa7.47□□□□□ -1.21
CDK5RAP1-201ENST00000339269 KRTAP13-3Q3SY46 172 aa7.47□□□□□ -1.21
CDK5RAP1-201ENST00000339269 FAT1Q14517 4588 aa7.46□□□□□ -1.21
CDK5RAP1-201ENST00000339269 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
CDK5RAP1-201ENST00000339269 HERC2O95714 4834 aa7.46□□□□□ -1.22
CDK5RAP1-201ENST00000339269 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
CDK5RAP1-201ENST00000339269 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
CDK5RAP1-201ENST00000339269 A6NN06 94 aa7.44□□□□□ -1.22
CDK5RAP1-201ENST00000339269 Q5W150 140 aa7.44□□□□□ -1.22
CDK5RAP1-201ENST00000339269 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
CDK5RAP1-201ENST00000339269 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
CDK5RAP1-201ENST00000339269 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
CDK5RAP1-201ENST00000339269 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
CDK5RAP1-201ENST00000339269 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
CDK5RAP1-201ENST00000339269 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
CDK5RAP1-201ENST00000339269 PLA2G1BP04054 148 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP1-201ENST00000339269 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP1-201ENST00000339269 LINC00313P59037 77 aa7.34□□□□□ -1.23
CDK5RAP1-201ENST00000339269 Q8N1X5 172 aa7.34□□□□□ -1.23
CDK5RAP1-201ENST00000339269 COA5Q86WW8 74 aa7.32□□□□□ -1.24
CDK5RAP1-201ENST00000339269 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
CDK5RAP1-201ENST00000339269 PSPHP1O15172 72 aa7.32□□□□□ -1.24
CDK5RAP1-201ENST00000339269 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
CDK5RAP1-201ENST00000339269 Q5VSD8 79 aa7.31□□□□□ -1.24
CDK5RAP1-201ENST00000339269 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
CDK5RAP1-201ENST00000339269 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
CDK5RAP1-201ENST00000339269 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
CDK5RAP1-201ENST00000339269 Q5VV11 94 aa7.3□□□□□ -1.24
CDK5RAP1-201ENST00000339269 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CDK5RAP1-201ENST00000339269 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
CDK5RAP1-201ENST00000339269 SPINK1P00995 79 aa7.28□□□□□ -1.24
CDK5RAP1-201ENST00000339269 HRES1P13985 223 aa7.27□□□□□ -1.25
CDK5RAP1-201ENST00000339269 A8MU10 97 aa7.26□□□□□ -1.25
CDK5RAP1-201ENST00000339269 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
CDK5RAP1-201ENST00000339269 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
CDK5RAP1-201ENST00000339269 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
CDK5RAP1-201ENST00000339269 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
CDK5RAP1-201ENST00000339269 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
CDK5RAP1-201ENST00000339269 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
CDK5RAP1-201ENST00000339269 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
CDK5RAP1-201ENST00000339269 CHKB-CPT1BH3BT56 60 aa7.21□□□□□ -1.26
CDK5RAP1-201ENST00000339269 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
CDK5RAP1-201ENST00000339269 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
CDK5RAP1-201ENST00000339269 Q75L30 129 aa7.19□□□□□ -1.26
CDK5RAP1-201ENST00000339269 TNXBP22105 4242 aa7.19□□□□□ -1.26
CDK5RAP1-201ENST00000339269 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
CDK5RAP1-201ENST00000339269 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
CDK5RAP1-201ENST00000339269 MYCBP2O75592 4640 aa7.16□□□□□ -1.26
CDK5RAP1-201ENST00000339269 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
CDK5RAP1-201ENST00000339269 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
CDK5RAP1-201ENST00000339269 FAT3Q8TDW7 4589 aa7.14□□□□□ -1.27
CDK5RAP1-201ENST00000339269 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
CDK5RAP1-201ENST00000339269 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
CDK5RAP1-201ENST00000339269 A6NED7 52 aa7.09□□□□□ -1.27
CDK5RAP1-201ENST00000339269 ACYP2P14621 99 aa7.09□□□□□ -1.28
CDK5RAP1-201ENST00000339269 A8MUU9 505 aa7.06□□□□□ -1.28
CDK5RAP1-201ENST00000339269 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
CDK5RAP1-201ENST00000339269 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
CDK5RAP1-201ENST00000339269 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms