RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
SCNN1A-202ENST00000338748 CD164Q04900 197 aa9.44□□□□□ -0.9
SCNN1A-202ENST00000338748 C8orf17Q9NRJ1 99 aa9.44□□□□□ -0.9
SCNN1A-202ENST00000338748 SMR3BP02814 79 aaPredicted RBP9.44□□□□□ -0.9
SCNN1A-202ENST00000338748 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
SCNN1A-202ENST00000338748 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
SCNN1A-202ENST00000338748 FAM229BQ4G0N7 80 aa9.43□□□□□ -0.9
SCNN1A-202ENST00000338748 Q5XG85 94 aa9.42□□□□□ -0.9
SCNN1A-202ENST00000338748 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
SCNN1A-202ENST00000338748 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
SCNN1A-202ENST00000338748 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
SCNN1A-202ENST00000338748 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
SCNN1A-202ENST00000338748 H0Y9P7 68 aa9.36□□□□□ -0.91
SCNN1A-202ENST00000338748 SEC61GP60059 68 aa9.35□□□□□ -0.91
SCNN1A-202ENST00000338748 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
SCNN1A-202ENST00000338748 MP68P56378 58 aa9.34□□□□□ -0.91
SCNN1A-202ENST00000338748 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
SCNN1A-202ENST00000338748 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
SCNN1A-202ENST00000338748 SMIM26A0A096LP01 95 aa9.32□□□□□ -0.92
SCNN1A-202ENST00000338748 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
SCNN1A-202ENST00000338748 HSPG2P98160 4391 aa9.32□□□□□ -0.92
SCNN1A-202ENST00000338748 TRAV22A0A0B4J277 110 aa9.31□□□□□ -0.92
SCNN1A-202ENST00000338748 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
SCNN1A-202ENST00000338748 TYMSOSQ8TAI1 123 aa9.31□□□□□ -0.92
SCNN1A-202ENST00000338748 PRR26Q8N8Z3 221 aa9.31□□□□□ -0.92
SCNN1A-202ENST00000338748 NDUFS5O43920 106 aa9.3□□□□□ -0.92
SCNN1A-202ENST00000338748 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
SCNN1A-202ENST00000338748 PRR4Q16378 134 aa9.25□□□□□ -0.93
SCNN1A-202ENST00000338748 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
SCNN1A-202ENST00000338748 H3BPC8 53 aa9.23□□□□□ -0.93
SCNN1A-202ENST00000338748 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
SCNN1A-202ENST00000338748 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
SCNN1A-202ENST00000338748 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.93
SCNN1A-202ENST00000338748 SPINK1P00995 79 aa9.2□□□□□ -0.94
SCNN1A-202ENST00000338748 Q5W150 140 aa9.2□□□□□ -0.94
SCNN1A-202ENST00000338748 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
SCNN1A-202ENST00000338748 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
SCNN1A-202ENST00000338748 LINC00313P59037 77 aa9.2□□□□□ -0.94
SCNN1A-202ENST00000338748 RYR1P21817 5038 aa9.19□□□□□ -0.94
SCNN1A-202ENST00000338748 LINC00304Q8N9R0 145 aa9.19□□□□□ -0.94
SCNN1A-202ENST00000338748 TNXBP22105 4242 aa9.17□□□□□ -0.94
SCNN1A-202ENST00000338748 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
SCNN1A-202ENST00000338748 KRTAP16-1A8MUX0 517 aa9.16□□□□□ -0.94
SCNN1A-202ENST00000338748 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
SCNN1A-202ENST00000338748 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
SCNN1A-202ENST00000338748 KIAA1109Q2LD37 5005 aa9.13□□□□□ -0.95
SCNN1A-202ENST00000338748 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
SCNN1A-202ENST00000338748 V9GYY9 64 aa9.12□□□□□ -0.95
SCNN1A-202ENST00000338748 EPPK1P58107 5090 aaKnown RBP9.11□□□□□ -0.95
SCNN1A-202ENST00000338748 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
SCNN1A-202ENST00000338748 PRO0628Q9UI54 55 aa9.1□□□□□ -0.95
SCNN1A-202ENST00000338748 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
SCNN1A-202ENST00000338748 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
SCNN1A-202ENST00000338748 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
SCNN1A-202ENST00000338748 KRTAP17-1Q9BYP8 105 aa9.07□□□□□ -0.96
SCNN1A-202ENST00000338748 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
SCNN1A-202ENST00000338748 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
SCNN1A-202ENST00000338748 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
SCNN1A-202ENST00000338748 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SCNN1A-202ENST00000338748 LOC101927531A0A1B0GV80 90 aa9.03□□□□□ -0.96
SCNN1A-202ENST00000338748 Q5VSD8 79 aa9.03□□□□□ -0.96
SCNN1A-202ENST00000338748 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
SCNN1A-202ENST00000338748 Q1T7F1 81 aa9.01□□□□□ -0.97
SCNN1A-202ENST00000338748 BRK1Q8WUW1 75 aa8.96□□□□□ -0.97
SCNN1A-202ENST00000338748 Q8N1X5 172 aa8.96□□□□□ -0.98
SCNN1A-202ENST00000338748 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
SCNN1A-202ENST00000338748 PSPHP1O15172 72 aa8.95□□□□□ -0.98
SCNN1A-202ENST00000338748 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
SCNN1A-202ENST00000338748 COA5Q86WW8 74 aa8.93□□□□□ -0.98
SCNN1A-202ENST00000338748 HRES1P13985 223 aa8.91□□□□□ -0.98
SCNN1A-202ENST00000338748 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
SCNN1A-202ENST00000338748 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
SCNN1A-202ENST00000338748 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
SCNN1A-202ENST00000338748 A8MUN3 132 aa8.88□□□□□ -0.99
SCNN1A-202ENST00000338748 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
SCNN1A-202ENST00000338748 A8MUU9 505 aa8.82□□□□□ -1
SCNN1A-202ENST00000338748 Q5VV11 94 aa8.8□□□□□ -1
SCNN1A-202ENST00000338748 DMAC1Q96GE9 116 aa8.8□□□□□ -1
SCNN1A-202ENST00000338748 PRR15LQ9BU68 103 aa8.78□□□□□ -1
SCNN1A-202ENST00000338748 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
SCNN1A-202ENST00000338748 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
SCNN1A-202ENST00000338748 ACYP2P14621 99 aa8.73□□□□□ -1.01
SCNN1A-202ENST00000338748 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
SCNN1A-202ENST00000338748 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
SCNN1A-202ENST00000338748 A8MU10 97 aa8.69□□□□□ -1.02
SCNN1A-202ENST00000338748 Q75L30 129 aa8.69□□□□□ -1.02
SCNN1A-202ENST00000338748 KRTAP4-5Q9BYR2 181 aa8.68□□□□□ -1.02
SCNN1A-202ENST00000338748 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
SCNN1A-202ENST00000338748 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
SCNN1A-202ENST00000338748 SPINK7P58062 85 aa8.62□□□□□ -1.03
SCNN1A-202ENST00000338748 A6NED7 52 aa8.61□□□□□ -1.03
SCNN1A-202ENST00000338748 LPAP08519 4548 aa8.6□□□□□ -1.03
SCNN1A-202ENST00000338748 XP32Q5T750 250 aa8.6□□□□□ -1.03
SCNN1A-202ENST00000338748 LRP2P98164 4655 aa8.59□□□□□ -1.03
SCNN1A-202ENST00000338748 LCA10Q71F78 164 aa8.57□□□□□ -1.04
SCNN1A-202ENST00000338748 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
SCNN1A-202ENST00000338748 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
SCNN1A-202ENST00000338748 HERC2O95714 4834 aa8.55□□□□□ -1.04
SCNN1A-202ENST00000338748 ATP11AUNQ6ZP68 121 aa8.53□□□□□ -1.04
SCNN1A-202ENST00000338748 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms