RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 A8MWP4 228 aa8.33□□□□□ -1.08
SEC13-201ENST00000337354 C8orf87E5RJ46 101 aa8.33□□□□□ -1.08
SEC13-201ENST00000337354 Q6ZVQ6 151 aa8.33□□□□□ -1.08
SEC13-201ENST00000337354 LINC00846Q9NV44 126 aa8.33□□□□□ -1.08
SEC13-201ENST00000337354 IGHV6-1A0A0B4J1U7 121 aa8.32□□□□□ -1.08
SEC13-201ENST00000337354 DSCR10P59022 87 aa8.31□□□□□ -1.08
SEC13-201ENST00000337354 BPY2O14599 106 aa8.3□□□□□ -1.08
SEC13-201ENST00000337354 ACYP1P07311 99 aa8.3□□□□□ -1.08
SEC13-201ENST00000337354 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
SEC13-201ENST00000337354 Q75L30 129 aa8.29□□□□□ -1.08
SEC13-201ENST00000337354 PRR15Q8IV56 129 aa8.28□□□□□ -1.08
SEC13-201ENST00000337354 IGKV3D-7A0A0C4DH55 119 aa8.27□□□□□ -1.09
SEC13-201ENST00000337354 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
SEC13-201ENST00000337354 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
SEC13-201ENST00000337354 NOTCH2NLQ7Z3S9 236 aa8.26□□□□□ -1.09
SEC13-201ENST00000337354 A8MUU9 505 aa8.24□□□□□ -1.09
SEC13-201ENST00000337354 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
SEC13-201ENST00000337354 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
SEC13-201ENST00000337354 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
SEC13-201ENST00000337354 C8orf17Q9NRJ1 99 aa8.22□□□□□ -1.09
SEC13-201ENST00000337354 A0A0U1RQV1 116 aa8.22□□□□□ -1.09
SEC13-201ENST00000337354 K7EQZ3 153 aa8.22□□□□□ -1.09
SEC13-201ENST00000337354 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
SEC13-201ENST00000337354 J3QR89 54 aa8.19□□□□□ -1.1
SEC13-201ENST00000337354 CXCL6P80162 114 aa8.19□□□□□ -1.1
SEC13-201ENST00000337354 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
SEC13-201ENST00000337354 MUC2Q02817 5179 aa8.15□□□□□ -1.1
SEC13-201ENST00000337354 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
SEC13-201ENST00000337354 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
SEC13-201ENST00000337354 Q8N9L7 120 aa8.14□□□□□ -1.11
SEC13-201ENST00000337354 TMEM254Q8TBM7 123 aa8.14□□□□□ -1.11
SEC13-201ENST00000337354 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
SEC13-201ENST00000337354 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
SEC13-201ENST00000337354 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
SEC13-201ENST00000337354 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SEC13-201ENST00000337354 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
SEC13-201ENST00000337354 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
SEC13-201ENST00000337354 WFDC13Q8IUB5 93 aa8.06□□□□□ -1.12
SEC13-201ENST00000337354 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
SEC13-201ENST00000337354 K7ERU9 68 aa8.03□□□□□ -1.12
SEC13-201ENST00000337354 NDUFS5O43920 106 aa8.03□□□□□ -1.12
SEC13-201ENST00000337354 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
SEC13-201ENST00000337354 HIST1H4AP62805 103 aaKnown RBP7.99□□□□□ -1.13
SEC13-201ENST00000337354 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
SEC13-201ENST00000337354 SPINK7P58062 85 aa7.93□□□□□ -1.14
SEC13-201ENST00000337354 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
SEC13-201ENST00000337354 Q5W150 140 aa7.9□□□□□ -1.14
SEC13-201ENST00000337354 KRTAP19-2Q3LHN2 52 aa7.89□□□□□ -1.15
SEC13-201ENST00000337354 A0A087WVE0 104 aa7.88□□□□□ -1.15
SEC13-201ENST00000337354 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
SEC13-201ENST00000337354 HRES1P13985 223 aa7.85□□□□□ -1.15
SEC13-201ENST00000337354 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
SEC13-201ENST00000337354 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
SEC13-201ENST00000337354 RBM12B-AS1Q9P1G2 102 aa7.84□□□□□ -1.15
SEC13-201ENST00000337354 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.16
SEC13-201ENST00000337354 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
SEC13-201ENST00000337354 UQCRQO14949 82 aa7.81□□□□□ -1.16
SEC13-201ENST00000337354 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
SEC13-201ENST00000337354 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
SEC13-201ENST00000337354 MT-ATP8P03928 68 aa7.79□□□□□ -1.16
SEC13-201ENST00000337354 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
SEC13-201ENST00000337354 FAM236DA0A1B0GTK5 79 aa7.76□□□□□ -1.17
SEC13-201ENST00000337354 FAM236CP0DP71 79 aa7.76□□□□□ -1.17
SEC13-201ENST00000337354 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
SEC13-201ENST00000337354 MT1HP80294 61 aa7.74□□□□□ -1.17
SEC13-201ENST00000337354 ATOX1O00244 68 aa7.73□□□□□ -1.17
SEC13-201ENST00000337354 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
SEC13-201ENST00000337354 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
SEC13-201ENST00000337354 H0Y9P7 68 aa7.69□□□□□ -1.18
SEC13-201ENST00000337354 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
SEC13-201ENST00000337354 M0R2T5 61 aa7.68□□□□□ -1.18
SEC13-201ENST00000337354 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
SEC13-201ENST00000337354 MP68P56378 58 aa7.66□□□□□ -1.18
SEC13-201ENST00000337354 SMIM20Q8N5G0 67 aa7.65□□□□□ -1.18
SEC13-201ENST00000337354 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
SEC13-201ENST00000337354 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
SEC13-201ENST00000337354 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
SEC13-201ENST00000337354 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
SEC13-201ENST00000337354 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
SEC13-201ENST00000337354 H3BPC8 53 aa7.62□□□□□ -1.19
SEC13-201ENST00000337354 LINC00208Q96KT6 92 aa7.61□□□□□ -1.19
SEC13-201ENST00000337354 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
SEC13-201ENST00000337354 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
SEC13-201ENST00000337354 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
SEC13-201ENST00000337354 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
SEC13-201ENST00000337354 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
SEC13-201ENST00000337354 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
SEC13-201ENST00000337354 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
SEC13-201ENST00000337354 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.21
SEC13-201ENST00000337354 SERP2Q8N6R1 65 aa7.46□□□□□ -1.21
SEC13-201ENST00000337354 A8MUN3 132 aa7.45□□□□□ -1.22
SEC13-201ENST00000337354 S4R3F8 94 aa7.41□□□□□ -1.22
SEC13-201ENST00000337354 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
SEC13-201ENST00000337354 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
SEC13-201ENST00000337354 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
SEC13-201ENST00000337354 LCA10Q71F78 164 aa7.35□□□□□ -1.23
SEC13-201ENST00000337354 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
SEC13-201ENST00000337354 COX7CP15954 63 aa7.34□□□□□ -1.23
SEC13-201ENST00000337354 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
SEC13-201ENST00000337354 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms