RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
HDAC5-202ENST00000336057 KRTAP13-1Q8IUC0 172 aa9.14□□□□□ -0.95
HDAC5-202ENST00000336057 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
HDAC5-202ENST00000336057 S4R3F8 94 aa9.1□□□□□ -0.95
HDAC5-202ENST00000336057 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
HDAC5-202ENST00000336057 CRYBG3Q68DQ2 2970 aa9.06□□□□□ -0.96
HDAC5-202ENST00000336057 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
HDAC5-202ENST00000336057 MXRA5Q9NR99 2828 aa9.01□□□□□ -0.97
HDAC5-202ENST00000336057 Q5VSD8 79 aa9□□□□□ -0.97
HDAC5-202ENST00000336057 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
HDAC5-202ENST00000336057 WDFY3Q8IZQ1 3526 aa8.97□□□□□ -0.97
HDAC5-202ENST00000336057 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
HDAC5-202ENST00000336057 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
HDAC5-202ENST00000336057 TENM4Q6N022 2769 aa8.96□□□□□ -0.98
HDAC5-202ENST00000336057 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
HDAC5-202ENST00000336057 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
HDAC5-202ENST00000336057 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
HDAC5-202ENST00000336057 RELNP78509 3460 aa8.92□□□□□ -0.98
HDAC5-202ENST00000336057 A6NN06 94 aa8.9□□□□□ -0.99
HDAC5-202ENST00000336057 ROMO1P60602 79 aa8.88□□□□□ -0.99
HDAC5-202ENST00000336057 R4GN34 69 aa8.88□□□□□ -0.99
HDAC5-202ENST00000336057 A8MU10 97 aa8.85□□□□□ -0.99
HDAC5-202ENST00000336057 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
HDAC5-202ENST00000336057 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
HDAC5-202ENST00000336057 DCHS1Q96JQ0 3298 aa8.82□□□□□ -1
HDAC5-202ENST00000336057 ZFHX4Q86UP3 3567 aa8.79□□□□□ -1
HDAC5-202ENST00000336057 LAMA5O15230 3695 aa8.77□□□□□ -1.01
HDAC5-202ENST00000336057 MUC3AQ02505 3323 aa8.75□□□□□ -1.01
HDAC5-202ENST00000336057 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
HDAC5-202ENST00000336057 CELSR1Q9NYQ6 3014 aa8.75□□□□□ -1.01
HDAC5-202ENST00000336057 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
HDAC5-202ENST00000336057 ASPMQ8IZT6 3477 aa8.75□□□□□ -1.01
HDAC5-202ENST00000336057 M0QZ58 72 aa8.74□□□□□ -1.01
HDAC5-202ENST00000336057 H3BS24 57 aa8.72□□□□□ -1.01
HDAC5-202ENST00000336057 M0R2T5 61 aa8.72□□□□□ -1.01
HDAC5-202ENST00000336057 DMDP11532 3685 aa8.66□□□□□ -1.02
HDAC5-202ENST00000336057 A8MUU9 505 aa8.64□□□□□ -1.03
HDAC5-202ENST00000336057 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
HDAC5-202ENST00000336057 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
HDAC5-202ENST00000336057 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
HDAC5-202ENST00000336057 CSMD1Q96PZ7 3565 aa8.58□□□□□ -1.04
HDAC5-202ENST00000336057 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
HDAC5-202ENST00000336057 SMG1Q96Q15 3661 aaKnown RBP8.57□□□□□ -1.04
HDAC5-202ENST00000336057 PDZD2O15018 2839 aa8.53□□□□□ -1.04
HDAC5-202ENST00000336057 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
HDAC5-202ENST00000336057 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
HDAC5-202ENST00000336057 VWFP04275 2813 aa8.45□□□□□ -1.06
HDAC5-202ENST00000336057 TGP01266 2768 aa8.42□□□□□ -1.06
HDAC5-202ENST00000336057 A0A0A0MQY5 61 aa8.41□□□□□ -1.06
HDAC5-202ENST00000336057 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
HDAC5-202ENST00000336057 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
HDAC5-202ENST00000336057 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
HDAC5-202ENST00000336057 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
HDAC5-202ENST00000336057 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
HDAC5-202ENST00000336057 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
HDAC5-202ENST00000336057 XP32Q5T750 250 aa8.33□□□□□ -1.08
HDAC5-202ENST00000336057 H0YAA0 97 aa8.32□□□□□ -1.08
HDAC5-202ENST00000336057 OTOGQ6ZRI0 2925 aa8.31□□□□□ -1.08
HDAC5-202ENST00000336057 NBPF19A0A087WUL8 3843 aa8.28□□□□□ -1.08
HDAC5-202ENST00000336057 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
HDAC5-202ENST00000336057 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
HDAC5-202ENST00000336057 CUBNO60494 3623 aa8.15□□□□□ -1.1
HDAC5-202ENST00000336057 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
HDAC5-202ENST00000336057 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
HDAC5-202ENST00000336057 ANK3Q12955 4377 aaKnown RBP8.1□□□□□ -1.11
HDAC5-202ENST00000336057 ZFHX3Q15911 3703 aa8.09□□□□□ -1.11
HDAC5-202ENST00000336057 TNP1P09430 55 aa8.08□□□□□ -1.12
HDAC5-202ENST00000336057 CSMD2Q7Z408 3487 aa8.07□□□□□ -1.12
HDAC5-202ENST00000336057 P0C880 135 aa8.06□□□□□ -1.12
HDAC5-202ENST00000336057 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
HDAC5-202ENST00000336057 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
HDAC5-202ENST00000336057 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
HDAC5-202ENST00000336057 FBN3Q75N90 2809 aa8□□□□□ -1.13
HDAC5-202ENST00000336057 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
HDAC5-202ENST00000336057 TRRAPQ9Y4A5 3859 aa7.97□□□□□ -1.13
HDAC5-202ENST00000336057 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
HDAC5-202ENST00000336057 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
HDAC5-202ENST00000336057 MEGF8Q7Z7M0 2845 aa7.87□□□□□ -1.15
HDAC5-202ENST00000336057 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
HDAC5-202ENST00000336057 VPS13CQ709C8 3753 aa7.72□□□□□ -1.17
HDAC5-202ENST00000336057 COL7A1Q02388 2944 aa7.71□□□□□ -1.18
HDAC5-202ENST00000336057 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
HDAC5-202ENST00000336057 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
HDAC5-202ENST00000336057 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
HDAC5-202ENST00000336057 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
HDAC5-202ENST00000336057 HUWE1Q7Z6Z7 4374 aaKnown RBP7.58□□□□□ -1.2
HDAC5-202ENST00000336057 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
HDAC5-202ENST00000336057 ZNF469Q96JG9 3925 aaPredicted RBP7.44□□□□□ -1.22
HDAC5-202ENST00000336057 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
HDAC5-202ENST00000336057 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
HDAC5-202ENST00000336057 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
HDAC5-202ENST00000336057 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
HDAC5-202ENST00000336057 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
HDAC5-202ENST00000336057 CSMD3Q7Z407 3707 aa7.31□□□□□ -1.24
HDAC5-202ENST00000336057 DNAH9Q9NYC9 4486 aa7.25□□□□□ -1.25
HDAC5-202ENST00000336057 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
HDAC5-202ENST00000336057 DNAH1Q9P2D7 4330 aa7.11□□□□□ -1.27
HDAC5-202ENST00000336057 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
HDAC5-202ENST00000336057 ALMS1Q8TCU4 4167 aa7.1□□□□□ -1.27
HDAC5-202ENST00000336057 DNAH5Q8TE73 4624 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms